Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:11:20 (2723853): wrapper (7.7.26015): starting
14:11:20 (2723853): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 14:11:20] Arguments: --nthreads 4
[2025-07-29 14:11:20] Threads: 4
[2025-07-29 14:11:20] Checking for CVMFS
[2025-07-29 14:11:20] No cvmfs_config command found, will try listing directly
[2025-07-29 14:11:20] CVMFS is ok
[2025-07-29 14:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 14:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 14:11:20] Further information can be found at the LHC@home message board.
[2025-07-29 14:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 14:11:20] Checking for apptainer binary...
[2025-07-29 14:11:20] which: no apptainer in ((null))
[2025-07-29 14:11:20] apptainer is not installed, using version from CVMFS
[2025-07-29 14:11:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 14:11:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-07-29 14:11:21] apptainer works
[2025-07-29 14:11:21] Set ATHENA_PROC_NUMBER=4
[2025-07-29 14:11:21] Set ATHENA_CORE_NUMBER=4
[2025-07-29 14:11:21] Starting ATLAS job with PandaID=6744931748
[2025-07-29 14:11:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:21:06 (2942296): wrapper (7.7.26015): starting
16:21:06 (2942296): wrapper: running run_atlas (--nthreads 4)
[2025-07-29 16:21:06] Arguments: --nthreads 4
[2025-07-29 16:21:06] Threads: 4
[2025-07-29 16:21:06] This job has been restarted, cleaning up previous attempt
[2025-07-29 16:21:06] Checking for CVMFS
[2025-07-29 16:21:06] No cvmfs_config command found, will try listing directly
[2025-07-29 16:21:06] CVMFS is ok
[2025-07-29 16:21:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-29 16:21:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-29 16:21:06] Further information can be found at the LHC@home message board.
[2025-07-29 16:21:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-29 16:21:06] Checking for apptainer binary...
[2025-07-29 16:21:06] which: no apptainer in ((null))
[2025-07-29 16:21:06] apptainer is not installed, using version from CVMFS
[2025-07-29 16:21:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-29 16:21:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-07-29 16:21:06] apptainer works
[2025-07-29 16:21:06] Set ATHENA_PROC_NUMBER=4
[2025-07-29 16:21:06] Set ATHENA_CORE_NUMBER=4
[2025-07-29 16:21:06] Starting ATLAS job with PandaID=6744931748
[2025-07-29 16:21:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-29 20:33:33]  *** The last 200 lines of the pilot log: ***
[2025-07-29 20:33:33] 2025-07-29 18:27:01,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-29 20:33:33] 2025-07-29 18:27:01,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-29 20:33:33] 2025-07-29 18:27:01,923 | INFO     | fitting pss+swap vs Time
[2025-07-29 20:33:33] 2025-07-29 18:27:01,923 | INFO     | sum of square deviations: 4394577280.5
[2025-07-29 20:33:33] 2025-07-29 18:27:01,925 | INFO     | sum of deviations: -80838715483.99998
[2025-07-29 20:33:33] 2025-07-29 18:27:01,926 | INFO     | mean x: 1753806253.5
[2025-07-29 20:33:33] 2025-07-29 18:27:01,926 | INFO     | mean y: 2396040.9338842975
[2025-07-29 20:33:33] 2025-07-29 18:27:01,926 | INFO     | -- intersect: 32263848210.598705
[2025-07-29 20:33:33] 2025-07-29 18:27:01,926 | INFO     | intersect: 32263848210.598705
[2025-07-29 20:33:33] 2025-07-29 18:27:01,927 | INFO     | chi2: 2.4889141709043714
[2025-07-29 20:33:33] 2025-07-29 18:27:01,927 | INFO     | sum of square deviations: 4127772278.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,929 | INFO     | sum of deviations: -65067087038.00001
[2025-07-29 20:33:33] 2025-07-29 18:27:01,929 | INFO     | mean x: 1753806101.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,929 | INFO     | mean y: 2404922.434599156
[2025-07-29 20:33:33] 2025-07-29 18:27:01,929 | INFO     | -- intersect: 27648080733.997
[2025-07-29 20:33:33] 2025-07-29 18:27:01,930 | INFO     | intersect: 27648080733.997
[2025-07-29 20:33:33] 2025-07-29 18:27:01,930 | INFO     | chi2: 1.8340405281518888
[2025-07-29 20:33:33] 2025-07-29 18:27:01,930 | INFO     | current chi2=1.8340405281518888 (change=26.31162015982768 %)
[2025-07-29 20:33:33] 2025-07-29 18:27:01,931 | INFO     | sum of square deviations: 3871990738.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,933 | INFO     | sum of deviations: -63469492218.99999
[2025-07-29 20:33:33] 2025-07-29 18:27:01,933 | INFO     | mean x: 1753805948.5
[2025-07-29 20:33:33] 2025-07-29 18:27:01,933 | INFO     | mean y: 2405875.077586207
[2025-07-29 20:33:33] 2025-07-29 18:27:01,933 | INFO     | -- intersect: 28750711471.34904
[2025-07-29 20:33:33] 2025-07-29 18:27:01,933 | INFO     | intersect: 28750711471.34904
[2025-07-29 20:33:33] 2025-07-29 18:27:01,934 | INFO     | chi2: 1.826175221981526
[2025-07-29 20:33:33] 2025-07-29 18:27:01,934 | INFO     | current chi2=1.826175221981526 (change=0.4288512739840324 %)
[2025-07-29 20:33:33] 2025-07-29 18:27:01,934 | INFO     | right removable region: 231
[2025-07-29 20:33:33] 2025-07-29 18:27:01,935 | INFO     | sum of square deviations: 4127772278.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,936 | INFO     | sum of deviations: -108965165651.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,937 | INFO     | mean x: 1753806406.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,937 | INFO     | mean y: 2411904.5907172994
[2025-07-29 20:33:33] 2025-07-29 18:27:01,937 | INFO     | -- intersect: 46299492431.07972
[2025-07-29 20:33:33] 2025-07-29 18:27:01,937 | INFO     | intersect: 46299492431.07972
[2025-07-29 20:33:33] 2025-07-29 18:27:01,937 | INFO     | chi2: 1.1564816556724957
[2025-07-29 20:33:33] 2025-07-29 18:27:01,938 | INFO     | current chi2=1.1564816556724957 (change=53.53469118413686 %)
[2025-07-29 20:33:33] 2025-07-29 18:27:01,938 | INFO     | sum of square deviations: 3871990738.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,940 | INFO     | sum of deviations: -101753096946.49998
[2025-07-29 20:33:33] 2025-07-29 18:27:01,940 | INFO     | mean x: 1753806558.5
[2025-07-29 20:33:33] 2025-07-29 18:27:01,940 | INFO     | mean y: 2407589.504310345
[2025-07-29 20:33:33] 2025-07-29 18:27:01,940 | INFO     | -- intersect: 46091166795.7403
[2025-07-29 20:33:33] 2025-07-29 18:27:01,941 | INFO     | intersect: 46091166795.7403
[2025-07-29 20:33:33] 2025-07-29 18:27:01,941 | INFO     | chi2: 1.1528108417894745
[2025-07-29 20:33:33] 2025-07-29 18:27:01,941 | INFO     | current chi2=1.1528108417894745 (change=0.3174122014833585 %)
[2025-07-29 20:33:33] 2025-07-29 18:27:01,941 | INFO     | left removable region: 20
[2025-07-29 20:33:33] 2025-07-29 18:27:01,942 | INFO     | sum of square deviations: 2912836010.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,943 | INFO     | sum of deviations: -63652953257.00001
[2025-07-29 20:33:33] 2025-07-29 18:27:01,943 | INFO     | mean x: 1753806528.0
[2025-07-29 20:33:33] 2025-07-29 18:27:01,944 | INFO     | mean y: 2404419.511848341
[2025-07-29 20:33:33] 2025-07-29 18:27:01,944 | INFO     | -- intersect: 38327584610.00444
[2025-07-29 20:33:33] 2025-07-29 18:27:01,944 | INFO     | intersect: 38327584610.00444
[2025-07-29 20:33:33] 2025-07-29 18:27:01,944 | INFO     | chi2: 0.43294901033791
[2025-07-29 20:33:33] 2025-07-29 18:27:01,945 | INFO     | -- intersect: 38327584610.00444
[2025-07-29 20:33:33] 2025-07-29 18:27:01,945 | INFO     | current memory leak: -21.85 B/s (using 211 data points, chi2=0.43)
[2025-07-29 20:33:33] 2025-07-29 18:27:01,945 | INFO     | could have reported an average CPU frequency of 2594 MHz (12 samples)
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | ..............................
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . Timing measurements:
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . get job = 0 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . initial setup = 0 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . payload setup = 7 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . stage-in = 0 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . payload execution = 14710 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,946 | INFO     | . stage-out = 1 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,947 | INFO     | . log creation = 0 s
[2025-07-29 20:33:33] 2025-07-29 18:27:01,947 | INFO     | ..............................
[2025-07-29 20:33:33] 2025-07-29 18:27:02,067 | INFO     | 
[2025-07-29 20:33:33] 2025-07-29 18:27:02,067 | INFO     | job summary report
[2025-07-29 20:33:33] 2025-07-29 18:27:02,067 | INFO     | --------------------------------------------------
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | PanDA job id: 6744931748
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | task id: 45743349
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | errors: (none)
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | pilot state: finished 
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | transexitcode: 0
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | exeerrorcode: 0
[2025-07-29 20:33:33] 2025-07-29 18:27:02,068 | INFO     | exeerrordiag: 
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | exitcode: 0
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | exitmsg: OK
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | cpuconsumptiontime: 56666 s
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | nevents: 400
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | neventsw: 0
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | pid: 2952758
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | pgrp: 2952758
[2025-07-29 20:33:33] 2025-07-29 18:27:02,069 | INFO     | corecount: 4
[2025-07-29 20:33:33] 2025-07-29 18:27:02,070 | INFO     | event service: False
[2025-07-29 20:33:33] 2025-07-29 18:27:02,070 | INFO     | sizes: {0: 2391073, 1: 2391940, 5: 2392202, 12: 2392258, 14721: 2423115, 14723: 2432135, 14724: 2432319, 14731: 2432513}
[2025-07-29 20:33:33] 2025-07-29 18:27:02,070 | INFO     | --------------------------------------------------
[2025-07-29 20:33:33] 2025-07-29 18:27:02,070 | INFO     | 
[2025-07-29 20:33:33] 2025-07-29 18:27:02,070 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-07-29 20:33:33] 2025-07-29 18:27:02,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | job 6744931748 has completed (purged errors)
[2025-07-29 20:33:33] 2025-07-29 18:27:02,095 | INFO     | overall cleanup function is called
[2025-07-29 20:33:33] 2025-07-29 18:27:03,102 | INFO     | --- collectZombieJob: --- 10, [2952758]
[2025-07-29 20:33:33] 2025-07-29 18:27:03,103 | INFO     | zombie collector waiting for pid 2952758
[2025-07-29 20:33:33] 2025-07-29 18:27:03,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-29 20:33:33] 2025-07-29 18:27:03,103 | INFO     | collected zombie processes
[2025-07-29 20:33:33] 2025-07-29 18:27:03,103 | INFO     | will attempt to kill all subprocesses of pid=2952758
[2025-07-29 20:33:33] 2025-07-29 18:27:03,428 | INFO     | process IDs to be killed: [2952758] (in reverse order)
[2025-07-29 20:33:33] 2025-07-29 18:27:03,517 | WARNING  | found no corresponding commands to process id(s)
[2025-07-29 20:33:33] 2025-07-29 18:27:03,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-29 20:33:33] 2025-07-29 18:27:03,526 | INFO     | did not find any defunct processes belonging to 2952758
[2025-07-29 20:33:33] 2025-07-29 18:27:03,533 | INFO     | did not find any defunct processes belonging to 2952758
[2025-07-29 20:33:33] 2025-07-29 18:27:03,533 | INFO     | ready for new job
[2025-07-29 20:33:33] 2025-07-29 18:27:03,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-29 20:33:33] 2025-07-29 18:27:03,535 | INFO     | ***************************************
[2025-07-29 20:33:33] 2025-07-29 18:27:03,536 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-29 20:33:33] 2025-07-29 18:27:03,536 | INFO     | ***************************************
[2025-07-29 20:33:33] 2025-07-29 18:27:03,536 | INFO     | 
[2025-07-29 20:33:33] 2025-07-29 18:27:03,538 | INFO     | architecture information:
[2025-07-29 20:33:33] 2025-07-29 18:27:03,539 | INFO     | executing command: cat /etc/os-release
[2025-07-29 20:33:33] 2025-07-29 18:27:03,551 | INFO     | cat /etc/os-release:
[2025-07-29 20:33:33] NAME="CentOS Linux"
[2025-07-29 20:33:33] VERSION="7 (Core)"
[2025-07-29 20:33:33] ID="centos"
[2025-07-29 20:33:33] ID_LIKE="rhel fedora"
[2025-07-29 20:33:33] VERSION_ID="7"
[2025-07-29 20:33:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-29 20:33:33] ANSI_COLOR="0;31"
[2025-07-29 20:33:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-29 20:33:33] HOME_URL="https://www.centos.org/"
[2025-07-29 20:33:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-29 20:33:33] 
[2025-07-29 20:33:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-29 20:33:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-29 20:33:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-29 20:33:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-29 20:33:33] 
[2025-07-29 20:33:33] 2025-07-29 18:27:03,551 | INFO     | ***************************************
[2025-07-29 20:33:33] 2025-07-29 18:27:04,054 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-07-29 20:33:33] 2025-07-29 18:27:04,070 | INFO     | sufficient remaining disk space (1654302703616 B)
[2025-07-29 20:33:33] 2025-07-29 18:27:04,070 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-29 20:33:33] 2025-07-29 18:27:04,071 | INFO     | current server update state: UPDATING_FINAL
[2025-07-29 20:33:33] 2025-07-29 18:27:04,071 | INFO     | update_server=False
[2025-07-29 20:33:33] 2025-07-29 18:27:04,071 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-29 20:33:33] 2025-07-29 18:27:04,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-29 20:33:33] 2025-07-29 18:27:04,550 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-29 20:33:33] 2025-07-29 18:27:04,550 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-29 20:33:33] 2025-07-29 18:27:04,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-29 20:33:33] 2025-07-29 18:27:04,551 | INFO     | will abort loop
[2025-07-29 20:33:33] 2025-07-29 18:27:04,819 | INFO     | all data control threads have been joined
[2025-07-29 20:33:33] 2025-07-29 18:27:04,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-29 20:33:33] 2025-07-29 18:27:04,887 | INFO     | all job control threads have been joined
[2025-07-29 20:33:33] 2025-07-29 18:27:05,076 | INFO     | [job] retrieve thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,077 | INFO     | [job] queue monitor thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,318 | INFO     | all payload control threads have been joined
[2025-07-29 20:33:33] 2025-07-29 18:27:05,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,556 | INFO     | [job] job monitor thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,564 | INFO     | [data] copytool_in thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,577 | INFO     | [job] validate thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,825 | INFO     | [data] control thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,856 | INFO     | [payload] validate_post thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,892 | INFO     | [job] control thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:05,920 | INFO     | [payload] validate_pre thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:06,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-29 20:33:33] 2025-07-29 18:27:06,046 | INFO     | [job] create_data_payload thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:06,204 | INFO     | [payload] failed_post thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:06,324 | INFO     | [payload] control thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:06,438 | INFO     | [payload] execute_payloads thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:06,887 | INFO     | [data] copytool_out thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:10,007 | INFO     | [data] queue_monitor thread has finished
[2025-07-29 20:33:33] 2025-07-29 18:27:10,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23247881647936)>', '<ExcThread(monitor, started 23247443707648)>']
[2025-07-29 20:33:33] 2025-07-29 18:27:15,914 | INFO     | all workflow threads have been joined
[2025-07-29 20:33:33] 2025-07-29 18:27:15,915 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-29 20:33:33] 2025-07-29 18:27:15,915 | INFO     | traces error code: 0
[2025-07-29 20:33:33] 2025-07-29 18:27:15,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-29 20:33:33] 2025-07-29 18:27:34,550 | INFO     | PID=2945944 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-29 20:33:33] 2025-07-29 18:27:34,551 | INFO     | .. there are 6 such processes running
[2025-07-29 20:33:33] 2025-07-29 18:27:34,551 | INFO     | found 0 job(s) in 20 queues
[2025-07-29 20:33:33] 2025-07-29 18:27:34,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-29 20:33:33] 2025-07-29 18:27:34,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-29 20:33:33] 2025-07-29 18:27:34,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-29 20:33:33] 2025-07-29 18:27:34,552 | INFO     | [monitor] control thread has ended
[2025-07-29 20:33:33] 2025-07-29 18:27:34,692 [wrapper] ==== pilot stdout END ====
[2025-07-29 20:33:33] 2025-07-29 18:27:34,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-29 20:33:33] 2025-07-29 18:27:34,697 [wrapper] pilotpid: 2945944
[2025-07-29 20:33:33] 2025-07-29 18:27:34,700 [wrapper] Pilot exit status: 0
[2025-07-29 20:33:33] 2025-07-29 18:27:34,711 [wrapper] pandaids: 6744931748 6744931748
[2025-07-29 20:33:33] 2025-07-29 18:27:34,769 [wrapper] cleanup supervisor_pilot 3311075 2945945
[2025-07-29 20:33:33] 2025-07-29 18:27:34,772 [wrapper] Test setup, not cleaning
[2025-07-29 20:33:33] 2025-07-29 18:27:34,775 [wrapper] apfmon messages muted
[2025-07-29 20:33:33] 2025-07-29 18:27:34,778 [wrapper] ==== wrapper stdout END ====
[2025-07-29 20:33:33] 2025-07-29 18:27:34,781 [wrapper] ==== wrapper stderr END ====
[2025-07-29 20:33:33]  *** Error codes and diagnostics ***
[2025-07-29 20:33:33]     "exeErrorCode": 0,
[2025-07-29 20:33:33]     "exeErrorDiag": "",
[2025-07-29 20:33:33]     "pilotErrorCode": 0,
[2025-07-29 20:33:33]     "pilotErrorDiag": "",
[2025-07-29 20:33:33]  *** Listing of results directory ***
[2025-07-29 20:33:33] total 502468
[2025-07-29 20:33:33] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc    530466 Jul 24 23:07 pilot3.tar.gz
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc      5112 Jul 24 23:07 queuedata.json
[2025-07-29 20:33:33] -rwx------ 1 boinc boinc     36292 Jul 24 23:08 runpilot2-wrapper.sh
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc       100 Jul 29 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-29 20:33:33] -rwxr-xr-x 1 boinc boinc      7986 Jul 29 14:11 run_atlas
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc       105 Jul 29 14:11 job.xml
[2025-07-29 20:33:33] -rw-r--r-- 3 boinc boinc 146210081 Jul 29 14:11 EVNT.45743347._000545.pool.root.1
[2025-07-29 20:33:33] -rw-r--r-- 3 boinc boinc 146210081 Jul 29 14:11 ATLAS.root_0
[2025-07-29 20:33:33] -rw-r--r-- 2 boinc boinc     15095 Jul 29 14:11 start_atlas.sh
[2025-07-29 20:33:33] drwxrwx--x 2 boinc boinc      4096 Jul 29 14:11 shared
[2025-07-29 20:33:33] -rw-r--r-- 2 boinc boinc    542876 Jul 29 14:11 input.tar.gz
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc         0 Jul 29 14:11 boinc_lockfile
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc      2559 Jul 29 16:21 pandaJob.out
[2025-07-29 20:33:33] -rw------- 1 boinc boinc    977316 Jul 29 16:21 agis_schedconf.cvmfs.json
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc      6430 Jul 29 20:12 init_data.xml
[2025-07-29 20:33:33] -rw------- 1 boinc boinc 214809622 Jul 29 20:26 HITS.45743349._009954.pool.root.1
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc       530 Jul 29 20:26 boinc_task_state.xml
[2025-07-29 20:33:33] -rw------- 1 boinc boinc        96 Jul 29 20:26 pilot_heartbeat.json
[2025-07-29 20:33:33] -rw------- 1 boinc boinc      1037 Jul 29 20:26 memory_monitor_summary.json
[2025-07-29 20:33:33] -rw------- 1 boinc boinc   1589827 Jul 29 20:26 agis_ddmendpoints.agis.ALL.json
[2025-07-29 20:33:33] -rw------- 1 boinc boinc    330788 Jul 29 20:26 log.45743349._009954.job.log.tgz.1
[2025-07-29 20:33:33] -rw------- 1 boinc boinc      7832 Jul 29 20:27 heartbeat.json
[2025-07-29 20:33:33] -rw------- 1 boinc boinc       822 Jul 29 20:27 pilotlog.txt
[2025-07-29 20:33:33] -rw------- 1 boinc boinc   1376847 Jul 29 20:27 log.45743349._009954.job.log.1
[2025-07-29 20:33:33] -rw------- 1 boinc boinc       357 Jul 29 20:27 output.list
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc       620 Jul 29 20:27 runtime_log
[2025-07-29 20:33:33] -rw------- 1 boinc boinc   1730560 Jul 29 20:27 result.tar.gz
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc      9104 Jul 29 20:27 runtime_log.err
[2025-07-29 20:33:33] -rw------- 1 boinc boinc       791 Jul 29 20:27 eF0LDmqLIz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnlNLDmICPs3m.diag
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc        28 Jul 29 20:33 wrapper_checkpoint.txt
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc      8192 Jul 29 20:33 boinc_mmap_file
[2025-07-29 20:33:33] -rw-r--r-- 1 boinc boinc     22622 Jul 29 20:33 stderr.txt
[2025-07-29 20:33:33] HITS file was successfully produced:
[2025-07-29 20:33:33] -rw------- 1 boinc boinc 214809622 Jul 29 20:26 shared/HITS.pool.root.1
[2025-07-29 20:33:33]  *** Contents of shared directory: ***
[2025-07-29 20:33:33] total 354808
[2025-07-29 20:33:33] -rw-r--r-- 3 boinc boinc 146210081 Jul 29 14:11 ATLAS.root_0
[2025-07-29 20:33:33] -rw-r--r-- 2 boinc boinc     15095 Jul 29 14:11 start_atlas.sh
[2025-07-29 20:33:33] -rw-r--r-- 2 boinc boinc    542876 Jul 29 14:11 input.tar.gz
[2025-07-29 20:33:33] -rw------- 1 boinc boinc 214809622 Jul 29 20:26 HITS.pool.root.1
[2025-07-29 20:33:33] -rw------- 1 boinc boinc   1730560 Jul 29 20:27 result.tar.gz
20:33:35 (2942296): run_atlas exited; CPU time 57252.278930
20:33:35 (2942296): called boinc_finish(0)

</stderr_txt>
]]>

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