Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:14:00 (152500): wrapper (7.7.26015): starting
03:14:00 (152500): wrapper: running run_atlas (--nthreads 12)
[2025-07-27 03:14:00] Arguments: --nthreads 12
[2025-07-27 03:14:00] Threads: 12
[2025-07-27 03:14:00] Checking for CVMFS
[2025-07-27 03:14:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 03:14:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 03:14:01] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 03:14:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 03:14:01] 2.13.1.0 3863 3507 144208 148794 2 338 29761110 46080001 53160 130560 0 22493313 99.938 4627688 21061 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-27 03:14:01] CVMFS is ok
[2025-07-27 03:14:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 03:14:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 03:14:01] Further information can be found at the LHC@home message board.
[2025-07-27 03:14:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 03:14:01] Checking for apptainer binary...
[2025-07-27 03:14:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 03:14:01] Running /usr/bin/apptainer --version
[2025-07-27 03:14:01] apptainer version 1.4.1-1.el9
[2025-07-27 03:14:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 03:14:02] mff2103.farm.particle.cz
[2025-07-27 03:14:02] apptainer works
[2025-07-27 03:14:02] Set ATHENA_PROC_NUMBER=12
[2025-07-27 03:14:02] Set ATHENA_CORE_NUMBER=12
[2025-07-27 03:14:02] Starting ATLAS job with PandaID=6745102832
[2025-07-27 03:14:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 05:30:48]  *** The last 200 lines of the pilot log: ***
[2025-07-27 05:30:48] 2025-07-27 03:28:07,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 05:30:48] 2025-07-27 03:28:07,136 | INFO     | fitting pss+swap vs Time
[2025-07-27 05:30:48] 2025-07-27 03:28:07,137 | INFO     | sum of square deviations: 665611758.8837214
[2025-07-27 05:30:48] 2025-07-27 03:28:07,137 | INFO     | sum of deviations: 30807866737.418587
[2025-07-27 05:30:48] 2025-07-27 03:28:07,147 | INFO     | mean x: 1753582876.0930233
[2025-07-27 05:30:48] 2025-07-27 03:28:07,147 | INFO     | mean y: 2652723.1317829457
[2025-07-27 05:30:48] 2025-07-27 03:28:07,147 | INFO     | -- intersect: -81162000452.91101
[2025-07-27 05:30:48] 2025-07-27 03:28:07,147 | INFO     | intersect: -81162000452.91101
[2025-07-27 05:30:48] 2025-07-27 03:28:07,147 | INFO     | chi2: 2.1707399160954775
[2025-07-27 05:30:48] 2025-07-27 03:28:07,148 | INFO     | sum of square deviations: 591176813.8387076
[2025-07-27 05:30:48] 2025-07-27 03:28:07,148 | INFO     | sum of deviations: 29370221473.887077
[2025-07-27 05:30:48] 2025-07-27 03:28:07,148 | INFO     | mean x: 1753582723.596774
[2025-07-27 05:30:48] 2025-07-27 03:28:07,148 | INFO     | mean y: 2649788.2177419355
[2025-07-27 05:30:48] 2025-07-27 03:28:07,148 | INFO     | -- intersect: -87116993200.4721
[2025-07-27 05:30:48] 2025-07-27 03:28:07,148 | INFO     | intersect: -87116993200.4721
[2025-07-27 05:30:48] 2025-07-27 03:28:07,149 | INFO     | chi2: 2.173782584056771
[2025-07-27 05:30:48] 2025-07-27 03:28:07,149 | INFO     | current chi2=2.173782584056771 (change=-0.14016731984946698 %)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,149 | INFO     | right removable region: 123
[2025-07-27 05:30:48] 2025-07-27 03:28:07,149 | INFO     | sum of square deviations: 591169493.8387076
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | sum of deviations: 1377047912.548387
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | mean x: 1753583028.596774
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | mean y: 2712349.370967742
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | -- intersect: -4082017790.08427
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | intersect: -4082017790.08427
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | chi2: 0.040604870962203804
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | current chi2=0.040604870962203804 (change=98.12944560234374 %)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,150 | INFO     | sum of square deviations: 522494778.78991604
[2025-07-27 05:30:48] 2025-07-27 03:28:07,151 | INFO     | sum of deviations: -1220276078.6722686
[2025-07-27 05:30:48] 2025-07-27 03:28:07,151 | INFO     | mean x: 1753583181.1008403
[2025-07-27 05:30:48] 2025-07-27 03:28:07,151 | INFO     | mean y: 2717975.722689076
[2025-07-27 05:30:48] 2025-07-27 03:28:07,151 | INFO     | -- intersect: 4098176331.9099503
[2025-07-27 05:30:48] 2025-07-27 03:28:07,151 | INFO     | intersect: 4098176331.9099503
[2025-07-27 05:30:48] 2025-07-27 03:28:07,151 | INFO     | chi2: 0.0038568866528368322
[2025-07-27 05:30:48] 2025-07-27 03:28:07,152 | INFO     | current chi2=0.0038568866528368322 (change=90.50141876715497 %)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,152 | INFO     | sum of square deviations: 459355051.236842
[2025-07-27 05:30:48] 2025-07-27 03:28:07,152 | INFO     | sum of deviations: -1185006162.8947368
[2025-07-27 05:30:48] 2025-07-27 03:28:07,152 | INFO     | mean x: 1753583333.6052632
[2025-07-27 05:30:48] 2025-07-27 03:28:07,152 | INFO     | mean y: 2717882.49122807
[2025-07-27 05:30:48] 2025-07-27 03:28:07,153 | INFO     | -- intersect: 4526467108.447428
[2025-07-27 05:30:48] 2025-07-27 03:28:07,153 | INFO     | intersect: 4526467108.447428
[2025-07-27 05:30:48] 2025-07-27 03:28:07,153 | INFO     | chi2: 0.003773035564234916
[2025-07-27 05:30:48] 2025-07-27 03:28:07,153 | INFO     | current chi2=0.003773035564234916 (change=2.174061520326036 %)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,153 | INFO     | left removable region: 30
[2025-07-27 05:30:48] 2025-07-27 03:28:07,153 | INFO     | sum of square deviations: 249377403.69892508
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | sum of deviations: -564577977.4193547
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | mean x: 1753583608.1182795
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | mean y: 2715059.129032258
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | -- intersect: 3972740699.0720463
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | intersect: 3972740699.0720463
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | chi2: 0.003163824864948725
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | -- intersect: 3972740699.0720463
[2025-07-27 05:30:48] 2025-07-27 03:28:07,154 | INFO     | current memory leak: -2.26 B/s (using 93 data points, chi2=0.00)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | could have reported an average CPU frequency of 2828 MHz (8 samples)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | ..............................
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . Timing measurements:
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . get job = 0 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . initial setup = 1 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . payload setup = 32 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . stage-in = 0 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . payload execution = 7883 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,155 | INFO     | . stage-out = 2 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,156 | INFO     | . log creation = 0 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,156 | INFO     | ..............................
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | 
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | job summary report
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | --------------------------------------------------
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | PanDA job id: 6745102832
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | task id: 45743349
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | errors: (none)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | pilot state: finished 
[2025-07-27 05:30:48] 2025-07-27 03:28:07,437 | INFO     | transexitcode: 0
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | exeerrorcode: 0
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | exeerrordiag: 
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | exitcode: 0
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | exitmsg: OK
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | cpuconsumptiontime: 44474 s
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | nevents: 400
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | neventsw: 0
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | pid: 208006
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | pgrp: 208006
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | corecount: 12
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | event service: False
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | sizes: {0: 2397249, 1: 2397504, 12: 2397504, 16: 2397794, 22: 2397822, 7920: 2425511, 7921: 2425638, 7923: 2434694, 7924: 2434750, 7972: 2434944}
[2025-07-27 05:30:48] 2025-07-27 03:28:07,438 | INFO     | --------------------------------------------------
[2025-07-27 05:30:48] 2025-07-27 03:28:07,439 | INFO     | 
[2025-07-27 05:30:48] 2025-07-27 03:28:07,439 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-07-27 05:30:48] 2025-07-27 03:28:07,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | job 6745102832 has completed (purged errors)
[2025-07-27 05:30:48] 2025-07-27 03:28:07,688 | INFO     | overall cleanup function is called
[2025-07-27 05:30:48] 2025-07-27 03:28:07,776 | INFO     | PID=163965 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 05:30:48] 2025-07-27 03:28:07,776 | INFO     | .. there are 96 such processes running
[2025-07-27 05:30:48] 2025-07-27 03:28:08,713 | INFO     | --- collectZombieJob: --- 10, [208006]
[2025-07-27 05:30:48] 2025-07-27 03:28:08,713 | INFO     | zombie collector waiting for pid 208006
[2025-07-27 05:30:48] 2025-07-27 03:28:08,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 05:30:48] 2025-07-27 03:28:08,713 | INFO     | collected zombie processes
[2025-07-27 05:30:48] 2025-07-27 03:28:08,713 | INFO     | will attempt to kill all subprocesses of pid=208006
[2025-07-27 05:30:48] 2025-07-27 03:28:09,711 | INFO     | process IDs to be killed: [208006] (in reverse order)
[2025-07-27 05:30:48] 2025-07-27 03:28:10,201 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 05:30:48] 2025-07-27 03:28:10,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 05:30:48] 2025-07-27 03:28:10,237 | INFO     | did not find any defunct processes belonging to 208006
[2025-07-27 05:30:48] 2025-07-27 03:28:10,269 | INFO     | did not find any defunct processes belonging to 208006
[2025-07-27 05:30:48] 2025-07-27 03:28:10,270 | INFO     | ready for new job
[2025-07-27 05:30:48] 2025-07-27 03:28:10,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 05:30:48] 2025-07-27 03:28:10,272 | INFO     | ***************************************
[2025-07-27 05:30:48] 2025-07-27 03:28:10,273 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 05:30:48] 2025-07-27 03:28:10,273 | INFO     | ***************************************
[2025-07-27 05:30:48] 2025-07-27 03:28:10,273 | INFO     | 
[2025-07-27 05:30:48] 2025-07-27 03:28:10,280 | INFO     | architecture information:
[2025-07-27 05:30:48] 2025-07-27 03:28:10,281 | INFO     | executing command: cat /etc/os-release
[2025-07-27 05:30:48] 2025-07-27 03:28:10,435 | INFO     | cat /etc/os-release:
[2025-07-27 05:30:48] NAME="CentOS Linux"
[2025-07-27 05:30:48] VERSION="7 (Core)"
[2025-07-27 05:30:48] ID="centos"
[2025-07-27 05:30:48] ID_LIKE="rhel fedora"
[2025-07-27 05:30:48] VERSION_ID="7"
[2025-07-27 05:30:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 05:30:48] ANSI_COLOR="0;31"
[2025-07-27 05:30:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 05:30:48] HOME_URL="https://www.centos.org/"
[2025-07-27 05:30:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 05:30:48] 
[2025-07-27 05:30:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 05:30:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 05:30:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 05:30:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 05:30:48] 
[2025-07-27 05:30:48] 2025-07-27 03:28:10,435 | INFO     | ***************************************
[2025-07-27 05:30:48] 2025-07-27 03:28:10,938 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-07-27 05:30:48] 2025-07-27 03:28:11,117 | INFO     | sufficient remaining disk space (1669584650240 B)
[2025-07-27 05:30:48] 2025-07-27 03:28:11,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 05:30:48] 2025-07-27 03:28:11,137 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 05:30:48] 2025-07-27 03:28:11,137 | INFO     | update_server=False
[2025-07-27 05:30:48] 2025-07-27 03:28:11,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 05:30:48] 2025-07-27 03:28:11,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 05:30:48] 2025-07-27 03:28:11,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:30:48] 2025-07-27 03:28:11,518 | INFO     | aborting loop
[2025-07-27 05:30:48] 2025-07-27 03:28:11,570 | INFO     | all data control threads have been joined
[2025-07-27 05:30:48] 2025-07-27 03:28:12,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 05:30:48] 2025-07-27 03:28:12,144 | INFO     | [job] retrieve thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:12,146 | INFO     | [payload] validate_post thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:12,239 | INFO     | all payload control threads have been joined
[2025-07-27 05:30:48] 2025-07-27 03:28:12,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 05:30:48] 2025-07-27 03:28:12,482 | INFO     | all job control threads have been joined
[2025-07-27 05:30:48] 2025-07-27 03:28:12,524 | INFO     | [job] job monitor thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:12,576 | INFO     | [data] control thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:12,613 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:12,873 | INFO     | [data] copytool_in thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:12,981 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:13,202 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:13,245 | INFO     | [payload] control thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:13,316 | INFO     | [payload] failed_post thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:13,380 | INFO     | [job] queue monitor thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:13,488 | INFO     | [job] control thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:13,591 | INFO     | [job] validate thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:14,121 | INFO     | [data] copytool_out thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:15,149 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:21,955 | INFO     | job.realtimelogging is not enabled
[2025-07-27 05:30:48] 2025-07-27 03:28:22,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 05:30:48] 2025-07-27 03:28:24,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712081741632)>', '<ExcThread(monitor, started 140711433328384)>']
[2025-07-27 05:30:48] 2025-07-27 03:28:29,167 | INFO     | all workflow threads have been joined
[2025-07-27 05:30:48] 2025-07-27 03:28:29,167 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 05:30:48] 2025-07-27 03:28:29,167 | INFO     | traces error code: 0
[2025-07-27 05:30:48] 2025-07-27 03:28:29,167 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 05:30:48] 2025-07-27 03:28:40,940 | INFO     | PID=163965 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-27 05:30:48] 2025-07-27 03:28:40,940 | INFO     | .. there are 96 such processes running
[2025-07-27 05:30:48] 2025-07-27 03:28:40,940 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 05:30:48] 2025-07-27 03:28:40,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 05:30:48] 2025-07-27 03:28:40,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 05:30:48] 2025-07-27 03:28:40,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 05:30:48] 2025-07-27 03:28:40,941 | INFO     | [monitor] control thread has ended
[2025-07-27 05:30:48] 2025-07-27 03:28:41,180 [wrapper] ==== pilot stdout END ====
[2025-07-27 05:30:48] 2025-07-27 03:28:41,214 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 05:30:48] 2025-07-27 03:28:41,289 [wrapper] pilotpid: 163965
[2025-07-27 05:30:48] 2025-07-27 03:28:41,337 [wrapper] Pilot exit status: 0
[2025-07-27 05:30:48] 2025-07-27 03:28:41,499 [wrapper] pandaids: 6745102832
[2025-07-27 05:30:48] 2025-07-27 03:28:41,800 [wrapper] cleanup supervisor_pilot  498707 163966
[2025-07-27 05:30:48] 2025-07-27 03:28:41,836 [wrapper] Test setup, not cleaning
[2025-07-27 05:30:48] 2025-07-27 03:28:41,870 [wrapper] apfmon messages muted
[2025-07-27 05:30:48] 2025-07-27 03:28:41,904 [wrapper] ==== wrapper stdout END ====
[2025-07-27 05:30:48] 2025-07-27 03:28:41,936 [wrapper] ==== wrapper stderr END ====
[2025-07-27 05:30:48]  *** Error codes and diagnostics ***
[2025-07-27 05:30:48]     "exeErrorCode": 0,
[2025-07-27 05:30:48]     "exeErrorDiag": "",
[2025-07-27 05:30:48]     "pilotErrorCode": 0,
[2025-07-27 05:30:48]     "pilotErrorDiag": "",
[2025-07-27 05:30:48]  *** Listing of results directory ***
[2025-07-27 05:30:48] total 354188
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc    530466 Jul 26 11:28 pilot3.tar.gz
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc      5112 Jul 26 11:28 queuedata.json
[2025-07-27 05:30:48] -rwx------ 1 boinc boinc     36292 Jul 26 11:29 runpilot2-wrapper.sh
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc       100 Jul 27 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 05:30:48] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 03:13 run_atlas
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc       105 Jul 27 03:13 job.xml
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc      6664 Jul 27 03:14 init_data.xml
[2025-07-27 05:30:48] -rw-r--r-- 2 boinc boinc 142902329 Jul 27 03:14 EVNT.45743347._002027.pool.root.1
[2025-07-27 05:30:48] -rw-r--r-- 2 boinc boinc     15095 Jul 27 03:14 start_atlas.sh
[2025-07-27 05:30:48] drwxrwx--x 2 boinc boinc      4096 Jul 27 03:14 shared
[2025-07-27 05:30:48] -rw-r--r-- 2 boinc boinc    542898 Jul 27 03:14 input.tar.gz
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc         0 Jul 27 03:14 boinc_lockfile
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc      2563 Jul 27 03:14 pandaJob.out
[2025-07-27 05:30:48] -rw------- 1 boinc boinc    980117 Jul 27 03:14 agis_schedconf.cvmfs.json
[2025-07-27 05:30:48] -rw------- 1 boinc boinc   1593052 Jul 27 03:14 agis_ddmendpoints.agis.ALL.json
[2025-07-27 05:30:48] drwx------ 4 boinc boinc      4096 Jul 27 03:14 pilot3
[2025-07-27 05:30:48] -rw------- 1 boinc boinc 213750488 Jul 27 05:26 HITS.45743349._035612.pool.root.1
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc       528 Jul 27 05:26 boinc_task_state.xml
[2025-07-27 05:30:48] -rw------- 1 boinc boinc      1021 Jul 27 05:27 memory_monitor_summary.json
[2025-07-27 05:30:48] -rw------- 1 boinc boinc    387024 Jul 27 05:27 log.45743349._035612.job.log.tgz.1
[2025-07-27 05:30:48] -rw------- 1 boinc boinc        95 Jul 27 05:27 pilot_heartbeat.json
[2025-07-27 05:30:48] -rw------- 1 boinc boinc      7772 Jul 27 05:28 heartbeat.json
[2025-07-27 05:30:48] -rw------- 1 boinc boinc       822 Jul 27 05:28 pilotlog.txt
[2025-07-27 05:30:48] -rw------- 1 boinc boinc    689095 Jul 27 05:28 log.45743349._035612.job.log.1
[2025-07-27 05:30:48] -rw------- 1 boinc boinc       357 Jul 27 05:28 output.list
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc       620 Jul 27 05:28 runtime_log
[2025-07-27 05:30:48] -rw------- 1 boinc boinc   1095680 Jul 27 05:28 result.tar.gz
[2025-07-27 05:30:48] -rw------- 1 boinc boinc       664 Jul 27 05:28 uaELDmGPqz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7V0KDmg6sCYn.diag
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc      8721 Jul 27 05:28 runtime_log.err
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc        26 Jul 27 05:30 wrapper_checkpoint.txt
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc      8192 Jul 27 05:30 boinc_mmap_file
[2025-07-27 05:30:48] -rw-r--r-- 1 boinc boinc     21143 Jul 27 05:30 stderr.txt
[2025-07-27 05:30:48] HITS file was successfully produced:
[2025-07-27 05:30:48] -rw------- 1 boinc boinc 213750488 Jul 27 05:26 shared/HITS.pool.root.1
[2025-07-27 05:30:48]  *** Contents of shared directory: ***
[2025-07-27 05:30:48] total 349928
[2025-07-27 05:30:48] -rw-r--r-- 2 boinc boinc 142902329 Jul 27 03:14 ATLAS.root_0
[2025-07-27 05:30:48] -rw-r--r-- 2 boinc boinc     15095 Jul 27 03:14 start_atlas.sh
[2025-07-27 05:30:48] -rw-r--r-- 2 boinc boinc    542898 Jul 27 03:14 input.tar.gz
[2025-07-27 05:30:48] -rw------- 1 boinc boinc 213750488 Jul 27 05:26 HITS.pool.root.1
[2025-07-27 05:30:48] -rw------- 1 boinc boinc   1095680 Jul 27 05:28 result.tar.gz
05:30:50 (152500): run_atlas exited; CPU time 44914.067686
05:30:50 (152500): called boinc_finish(0)

</stderr_txt>
]]>

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