Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:06:07 (4070195): wrapper (7.7.26015): starting
11:06:07 (4070195): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 11:06:07] Arguments: --nthreads 8
[2025-07-26 11:06:07] Threads: 8
[2025-07-26 11:06:07] Checking for CVMFS
[2025-07-26 11:06:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:06:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:06:08] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:06:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:06:08] 2.13.1.0 1619052 11672 262536 148780 3 65 31225980 40960001 19297 16776704 0 67106189 99.634 77914203 38134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 11:06:08] CVMFS is ok
[2025-07-26 11:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:06:08] Further information can be found at the LHC@home message board.
[2025-07-26 11:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:06:08] Checking for apptainer binary...
[2025-07-26 11:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:06:08] Running /usr/bin/apptainer --version
[2025-07-26 11:06:08] apptainer version 1.4.1-1.el9
[2025-07-26 11:06:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:06:08] c-212-15.aglt2.org
[2025-07-26 11:06:08] apptainer works
[2025-07-26 11:06:08] Set ATHENA_PROC_NUMBER=8
[2025-07-26 11:06:08] Set ATHENA_CORE_NUMBER=8
[2025-07-26 11:06:08] Starting ATLAS job with PandaID=6745102821
[2025-07-26 11:06:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:34:36]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:34:36]  status_code=0
[2025-07-26 12:34:36]  storage_token=
[2025-07-26 12:34:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745102821/log.45743349._035601.job.log.tgz.1
[2025-07-26 12:34:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/62/log.45743349._035601.job.log.tgz.1
[2025-07-26 12:34:36]  workdir=None
[2025-07-26 12:34:36] ]
[2025-07-26 12:34:36] 2025-07-26 16:33:50,767 | INFO     | transferring file log.45743349._035601.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745102821/log.45743349._035601.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:34:36] 2025-07-26 16:33:50,767 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745102821/log.45743349._035601.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._035601.job
[2025-07-26 12:34:36] 2025-07-26 16:33:50,801 | INFO     | adding to output.list: log.45743349._035601.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ef/62/log.45743349._035601.job.log.tg
[2025-07-26 12:34:36] 2025-07-26 16:33:50,803 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:34:36] 2025-07-26 16:33:50,803 | INFO     | summary of transferred files:
[2025-07-26 12:34:36] 2025-07-26 16:33:50,803 | INFO     |  -- lfn=log.45743349._035601.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:34:36] 2025-07-26 16:33:50,803 | INFO     | stage-out finished correctly
[2025-07-26 12:34:36] 2025-07-26 16:33:52,076 | WARNING  | process 4085346 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 12:34:36] 2025-07-26 16:33:52,077 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745102821/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:34:36] 2025-07-26 16:33:52,568 | INFO     | number of running child processes to parent process 4085346: 1
[2025-07-26 12:34:36] 2025-07-26 16:33:52,568 | INFO     | maximum number of monitored processes: 6
[2025-07-26 12:34:36] 2025-07-26 16:33:53,378 | INFO     | PID=4076669 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 12:34:36] 2025-07-26 16:33:53,378 | INFO     | .. there are 24 such processes running
[2025-07-26 12:34:36] 2025-07-26 16:33:53,922 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:34:36] 2025-07-26 16:33:55,074 | INFO     | monitor loop #370: job 0:6745102821 is in state 'finished'
[2025-07-26 12:34:36] 2025-07-26 16:33:55,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:34:36] 2025-07-26 16:33:56,857 | INFO     | job 6745102821 has state=finished
[2025-07-26 12:34:36] 2025-07-26 16:33:56,858 | INFO     | preparing for final server update for job 6745102821 in state='finished'
[2025-07-26 12:34:36] 2025-07-26 16:33:56,859 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:34:36] 2025-07-26 16:33:56,859 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:34:36] 2025-07-26 16:33:56,859 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:34:36] 2025-07-26 16:33:56,859 | INFO     | job 6745102821 has finished - writing final server update
[2025-07-26 12:34:36] 2025-07-26 16:33:56,860 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:34:36] 2025-07-26 16:33:56,861 | INFO     | executing command: lscpu
[2025-07-26 12:34:36] 2025-07-26 16:33:56,949 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:34:36] 2025-07-26 16:33:57,581 | INFO     | monitor loop #371: job 0:6745102821 is in state 'finished'
[2025-07-26 12:34:36] 2025-07-26 16:33:57,582 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:34:36] 2025-07-26 16:34:00,086 | INFO     | monitor loop #372: job 0:6745102821 is in state 'finished'
[2025-07-26 12:34:36] 2025-07-26 16:34:00,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:34:36] 2025-07-26 16:34:02,590 | INFO     | monitor loop #373: job 0:6745102821 is in state 'finished'
[2025-07-26 12:34:36] 2025-07-26 16:34:02,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,548 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 12:34:36] 2025-07-26 16:34:03,560 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3086.5829166666663
[2025-07-26 12:34:36] 2025-07-26 16:34:03,574 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745102821/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,575 | INFO     | extracted standard info from prmon json
[2025-07-26 12:34:36] 2025-07-26 16:34:03,575 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:34:36] 2025-07-26 16:34:03,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:34:36] 2025-07-26 16:34:03,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:34:36] 2025-07-26 16:34:03,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:34:36] 2025-07-26 16:34:03,577 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:34:36] 2025-07-26 16:34:03,577 | INFO     | sum of square deviations: 152858680.0
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | sum of deviations: -4601405741.000001
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | mean x: 1753545112.0
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | mean y: 2560732.0126582277
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | -- intersect: 52788392360.67313
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | intersect: 52788392360.67313
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | chi2: 0.09848514362443818
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | -- intersect: 52788392360.67313
[2025-07-26 12:34:36] 2025-07-26 16:34:03,578 | INFO     | current memory leak: -30.10 B/s (using 79 data points, chi2=0.10)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | could have reported an average CPU frequency of 3082 MHz (6 samples)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | ..............................
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . Timing measurements:
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . get job = 0 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . initial setup = 3 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . payload setup = 12 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . stage-in = 0 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . payload execution = 5207 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . stage-out = 0 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,579 | INFO     | . log creation = 0 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,580 | INFO     | ..............................
[2025-07-26 12:34:36] 2025-07-26 16:34:03,657 | INFO     | 
[2025-07-26 12:34:36] 2025-07-26 16:34:03,657 | INFO     | job summary report
[2025-07-26 12:34:36] 2025-07-26 16:34:03,657 | INFO     | --------------------------------------------------
[2025-07-26 12:34:36] 2025-07-26 16:34:03,657 | INFO     | PanDA job id: 6745102821
[2025-07-26 12:34:36] 2025-07-26 16:34:03,657 | INFO     | task id: 45743349
[2025-07-26 12:34:36] 2025-07-26 16:34:03,657 | INFO     | errors: (none)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:34:36] 2025-07-26 16:34:03,658 | INFO     | pilot state: finished 
[2025-07-26 12:34:36] 2025-07-26 16:34:03,658 | INFO     | transexitcode: 0
[2025-07-26 12:34:36] 2025-07-26 16:34:03,658 | INFO     | exeerrorcode: 0
[2025-07-26 12:34:36] 2025-07-26 16:34:03,658 | INFO     | exeerrordiag: 
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | exitcode: 0
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | exitmsg: OK
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | cpuconsumptiontime: 37652 s
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | nevents: 400
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | neventsw: 0
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | pid: 4085346
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | pgrp: 4085346
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | corecount: 8
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | event service: False
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | sizes: {0: 2397304, 1: 2397503, 8: 2397765, 11: 2397793, 5223: 2424370, 5224: 2433368, 5227: 2433552, 5237: 2433746}
[2025-07-26 12:34:36] 2025-07-26 16:34:03,661 | INFO     | --------------------------------------------------
[2025-07-26 12:34:36] 2025-07-26 16:34:03,662 | INFO     | 
[2025-07-26 12:34:36] 2025-07-26 16:34:03,662 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 12:34:36] 2025-07-26 16:34:03,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | job 6745102821 has completed (purged errors)
[2025-07-26 12:34:36] 2025-07-26 16:34:03,698 | INFO     | overall cleanup function is called
[2025-07-26 12:34:36] 2025-07-26 16:34:04,706 | INFO     | --- collectZombieJob: --- 10, [4085346]
[2025-07-26 12:34:36] 2025-07-26 16:34:04,707 | INFO     | zombie collector waiting for pid 4085346
[2025-07-26 12:34:36] 2025-07-26 16:34:04,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:34:36] 2025-07-26 16:34:04,707 | INFO     | collected zombie processes
[2025-07-26 12:34:36] 2025-07-26 16:34:04,707 | INFO     | will attempt to kill all subprocesses of pid=4085346
[2025-07-26 12:34:36] 2025-07-26 16:34:05,206 | INFO     | process IDs to be killed: [4085346] (in reverse order)
[2025-07-26 12:34:36] 2025-07-26 16:34:05,377 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:34:36] 2025-07-26 16:34:05,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:34:36] 2025-07-26 16:34:05,397 | INFO     | did not find any defunct processes belonging to 4085346
[2025-07-26 12:34:36] 2025-07-26 16:34:05,417 | INFO     | did not find any defunct processes belonging to 4085346
[2025-07-26 12:34:36] 2025-07-26 16:34:05,417 | INFO     | ready for new job
[2025-07-26 12:34:36] 2025-07-26 16:34:05,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:34:36] 2025-07-26 16:34:05,419 | INFO     | ***************************************
[2025-07-26 12:34:36] 2025-07-26 16:34:05,419 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:34:36] 2025-07-26 16:34:05,419 | INFO     | ***************************************
[2025-07-26 12:34:36] 2025-07-26 16:34:05,419 | INFO     | 
[2025-07-26 12:34:36] 2025-07-26 16:34:05,424 | INFO     | architecture information:
[2025-07-26 12:34:36] 2025-07-26 16:34:05,425 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:34:36] 2025-07-26 16:34:05,444 | INFO     | cat /etc/os-release:
[2025-07-26 12:34:36] NAME="CentOS Linux"
[2025-07-26 12:34:36] VERSION="7 (Core)"
[2025-07-26 12:34:36] ID="centos"
[2025-07-26 12:34:36] ID_LIKE="rhel fedora"
[2025-07-26 12:34:36] VERSION_ID="7"
[2025-07-26 12:34:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:34:36] ANSI_COLOR="0;31"
[2025-07-26 12:34:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:34:36] HOME_URL="https://www.centos.org/"
[2025-07-26 12:34:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:34:36] 
[2025-07-26 12:34:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:34:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:34:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:34:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:34:36] 
[2025-07-26 12:34:36] 2025-07-26 16:34:05,445 | INFO     | ***************************************
[2025-07-26 12:34:36] 2025-07-26 16:34:05,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 12:34:36] 2025-07-26 16:34:05,972 | INFO     | sufficient remaining disk space (129111162880 B)
[2025-07-26 12:34:36] 2025-07-26 16:34:05,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:34:36] 2025-07-26 16:34:05,973 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:34:36] 2025-07-26 16:34:05,973 | INFO     | update_server=False
[2025-07-26 12:34:36] 2025-07-26 16:34:05,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:34:36] 2025-07-26 16:34:06,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:34:36] 2025-07-26 16:34:06,104 | INFO     | aborting loop
[2025-07-26 12:34:36] 2025-07-26 16:34:06,374 | INFO     | all payload control threads have been joined
[2025-07-26 12:34:36] 2025-07-26 16:34:06,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:34:36] 2025-07-26 16:34:06,630 | INFO     | all data control threads have been joined
[2025-07-26 12:34:36] 2025-07-26 16:34:06,979 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,110 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,303 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,358 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,379 | INFO     | [payload] control thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,402 | INFO     | [job] validate thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,465 | INFO     | all job control threads have been joined
[2025-07-26 12:34:36] 2025-07-26 16:34:07,635 | INFO     | [data] control thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,655 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:07,772 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:08,274 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:08,423 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:08,471 | INFO     | [job] control thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:08,502 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:08,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:34:36] 2025-07-26 16:34:09,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:34:36] 2025-07-26 16:34:09,672 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:13,024 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:34:36] 2025-07-26 16:34:14,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430575912768)>', '<ExcThread(monitor, started 140430213617408)>']
[2025-07-26 12:34:36] 2025-07-26 16:34:19,990 | INFO     | all workflow threads have been joined
[2025-07-26 12:34:36] 2025-07-26 16:34:19,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:34:36] 2025-07-26 16:34:19,995 | INFO     | traces error code: 0
[2025-07-26 12:34:36] 2025-07-26 16:34:19,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:34:36] 2025-07-26 16:34:36,002 | INFO     | PID=4076669 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:34:36] 2025-07-26 16:34:36,002 | INFO     | .. there are 24 such processes running
[2025-07-26 12:34:36] 2025-07-26 16:34:36,003 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:34:36] 2025-07-26 16:34:36,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:34:36] 2025-07-26 16:34:36,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:34:36] 2025-07-26 16:34:36,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:34:36] 2025-07-26 16:34:36,003 | INFO     | [monitor] control thread has ended
[2025-07-26 12:34:36] 2025-07-26 16:34:36,271 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:34:36] 2025-07-26 16:34:36,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:34:36] 2025-07-26 16:34:36,284 [wrapper] pilotpid: 4076669
[2025-07-26 12:34:36] 2025-07-26 16:34:36,288 [wrapper] Pilot exit status: 0
[2025-07-26 12:34:36] 2025-07-26 16:34:36,311 [wrapper] pandaids: 6745102821
[2025-07-26 12:34:36] 2025-07-26 16:34:36,444 [wrapper] cleanup supervisor_pilot  486592 4076670
[2025-07-26 12:34:36] 2025-07-26 16:34:36,448 [wrapper] Test setup, not cleaning
[2025-07-26 12:34:36] 2025-07-26 16:34:36,454 [wrapper] apfmon messages muted
[2025-07-26 12:34:36] 2025-07-26 16:34:36,463 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:34:36] 2025-07-26 16:34:36,470 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:34:36]  *** Error codes and diagnostics ***
[2025-07-26 12:34:36]     "exeErrorCode": 0,
[2025-07-26 12:34:36]     "exeErrorDiag": "",
[2025-07-26 12:34:36]     "pilotErrorCode": 0,
[2025-07-26 12:34:36]     "pilotErrorDiag": "",
[2025-07-26 12:34:36]  *** Listing of results directory ***
[2025-07-26 12:34:36] total 357684
[2025-07-26 12:34:36] -rwx------. 1 boincer umatlas     36292 Jul 26 05:28 runpilot2-wrapper.sh
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 05:28 pilot3.tar.gz
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 05:28 queuedata.json
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:34:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:06 run_atlas
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:06 job.xml
[2025-07-26 12:34:36] -rw-r--r--. 2 boincer umatlas 143970125 Jul 26 11:06 EVNT.45743347._002026.pool.root.1
[2025-07-26 12:34:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:06 start_atlas.sh
[2025-07-26 12:34:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:06 shared
[2025-07-26 12:34:36] -rw-r--r--. 2 boincer umatlas    542883 Jul 26 11:06 input.tar.gz
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:06 boinc_lockfile
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 11:06 pandaJob.out
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas    980133 Jul 26 11:06 agis_schedconf.cvmfs.json
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:06 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:34:36] drwx------. 4 boincer umatlas      4096 Jul 26 11:06 pilot3
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas      6941 Jul 26 12:29 init_data.xml
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas 216788157 Jul 26 12:33 HITS.45743349._035601.pool.root.1
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:33 boinc_task_state.xml
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas      1031 Jul 26 12:33 memory_monitor_summary.json
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas    313319 Jul 26 12:33 log.45743349._035601.job.log.tgz.1
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas        95 Jul 26 12:33 pilot_heartbeat.json
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas      7770 Jul 26 12:34 heartbeat.json
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas       823 Jul 26 12:34 pilotlog.txt
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:34 wrapper_checkpoint.txt
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:34 boinc_mmap_file
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas    505402 Jul 26 12:34 log.45743349._035601.job.log.1
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas       357 Jul 26 12:34 output.list
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:34 runtime_log
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas    839680 Jul 26 12:34 result.tar.gz
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 12:34 runtime_log.err
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas       654 Jul 26 12:34 0RWLDmHOqz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmalRLDmiKmmSm.diag
[2025-07-26 12:34:36] -rw-r--r--. 1 boincer umatlas     22279 Jul 26 12:34 stderr.txt
[2025-07-26 12:34:36] HITS file was successfully produced:
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas 216788157 Jul 26 12:33 shared/HITS.pool.root.1
[2025-07-26 12:34:36]  *** Contents of shared directory: ***
[2025-07-26 12:34:36] total 353676
[2025-07-26 12:34:36] -rw-r--r--. 2 boincer umatlas 143970125 Jul 26 11:06 ATLAS.root_0
[2025-07-26 12:34:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:06 start_atlas.sh
[2025-07-26 12:34:36] -rw-r--r--. 2 boincer umatlas    542883 Jul 26 11:06 input.tar.gz
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas 216788157 Jul 26 12:33 HITS.pool.root.1
[2025-07-26 12:34:36] -rw-------. 1 boincer umatlas    839680 Jul 26 12:34 result.tar.gz
12:34:38 (4070195): run_atlas exited; CPU time 37824.961062
12:34:38 (4070195): called boinc_finish(0)

</stderr_txt>
]]>

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