Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:39:44 (113862): wrapper (7.7.26015): starting
10:39:44 (113862): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 10:39:44] Arguments: --nthreads 8
[2025-07-26 10:39:44] Threads: 8
[2025-07-26 10:39:44] Checking for CVMFS
[2025-07-26 10:39:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:39:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:39:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:39:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:39:45] 2.13.1.0 1173468 11627 210672 148780 0 333 35719027 40960000 13712 16776704 0 46970395 99.866 24004527 40889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 10:39:45] CVMFS is ok
[2025-07-26 10:39:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:39:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:39:45] Further information can be found at the LHC@home message board.
[2025-07-26 10:39:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:39:45] Checking for apptainer binary...
[2025-07-26 10:39:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:39:45] Running /usr/bin/apptainer --version
[2025-07-26 10:39:45] apptainer version 1.4.1-1.el9
[2025-07-26 10:39:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:39:45] c-212-20.aglt2.org
[2025-07-26 10:39:45] apptainer works
[2025-07-26 10:39:45] Set ATHENA_PROC_NUMBER=8
[2025-07-26 10:39:45] Set ATHENA_CORE_NUMBER=8
[2025-07-26 10:39:45] Starting ATLAS job with PandaID=6745101848
[2025-07-26 10:39:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:11:25]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:11:25]  protocol_id=None
[2025-07-26 12:11:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:11:25]  replicas=None
[2025-07-26 12:11:25]  scope=mc23_13p6TeV
[2025-07-26 12:11:25]  status=None
[2025-07-26 12:11:25]  status_code=0
[2025-07-26 12:11:25]  storage_token=
[2025-07-26 12:11:25]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745101848/log.45743349._035146.job.log.tgz.1
[2025-07-26 12:11:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/14/log.45743349._035146.job.log.tgz.1
[2025-07-26 12:11:25]  workdir=None
[2025-07-26 12:11:25] ]
[2025-07-26 12:11:25] 2025-07-26 16:10:46,354 | INFO     | transferring file log.45743349._035146.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745101848/log.45743349._035146.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:11:25] 2025-07-26 16:10:46,354 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745101848/log.45743349._035146.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._035146.job
[2025-07-26 12:11:25] 2025-07-26 16:10:46,371 | INFO     | adding to output.list: log.45743349._035146.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/14/log.45743349._035146.job.log.tg
[2025-07-26 12:11:25] 2025-07-26 16:10:46,374 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:11:25] 2025-07-26 16:10:46,374 | INFO     | summary of transferred files:
[2025-07-26 12:11:25] 2025-07-26 16:10:46,374 | INFO     |  -- lfn=log.45743349._035146.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:11:25] 2025-07-26 16:10:46,374 | INFO     | stage-out finished correctly
[2025-07-26 12:11:25] 2025-07-26 16:10:47,519 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:11:25] 2025-07-26 16:10:47,601 | INFO     | job 6745101848 has state=finished
[2025-07-26 12:11:25] 2025-07-26 16:10:47,602 | INFO     | preparing for final server update for job 6745101848 in state='finished'
[2025-07-26 12:11:25] 2025-07-26 16:10:47,602 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:11:25] 2025-07-26 16:10:47,602 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:11:25] 2025-07-26 16:10:47,602 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:11:25] 2025-07-26 16:10:47,602 | INFO     | job 6745101848 has finished - writing final server update
[2025-07-26 12:11:25] 2025-07-26 16:10:47,603 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:11:25] 2025-07-26 16:10:47,603 | INFO     | executing command: lscpu
[2025-07-26 12:11:25] 2025-07-26 16:10:47,688 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:11:25] 2025-07-26 16:10:47,858 | INFO     | monitor loop #401: job 0:6745101848 is in state 'finished'
[2025-07-26 12:11:25] 2025-07-26 16:10:47,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:11:25] 2025-07-26 16:10:50,361 | INFO     | monitor loop #402: job 0:6745101848 is in state 'finished'
[2025-07-26 12:11:25] 2025-07-26 16:10:50,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:11:25] 2025-07-26 16:10:52,645 | INFO     | PID=117695 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:11:25] 2025-07-26 16:10:52,645 | INFO     | .. there are 15 such processes running
[2025-07-26 12:11:25] 2025-07-26 16:10:52,865 | INFO     | monitor loop #403: job 0:6745101848 is in state 'finished'
[2025-07-26 12:11:25] 2025-07-26 16:10:52,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,289 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 12:11:25] 2025-07-26 16:10:53,303 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3064.4150937500003
[2025-07-26 12:11:25] 2025-07-26 16:10:53,318 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745101848/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,319 | INFO     | extracted standard info from prmon json
[2025-07-26 12:11:25] 2025-07-26 16:10:53,319 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:11:25] 2025-07-26 16:10:53,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:11:25] 2025-07-26 16:10:53,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:11:25] 2025-07-26 16:10:53,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:11:25] 2025-07-26 16:10:53,321 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:11:25] 2025-07-26 16:10:53,321 | INFO     | sum of square deviations: 170944600.5
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | sum of deviations: -18715851152.000004
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | mean x: 1753543605.5
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | mean y: 2686093.2682926827
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | -- intersect: 191989218648.76373
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | intersect: 191989218648.76373
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | chi2: 0.13322883014507184
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | -- intersect: 191989218648.76373
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | current memory leak: -109.48 B/s (using 82 data points, chi2=0.13)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,322 | INFO     | could have reported an average CPU frequency of 3120 MHz (7 samples)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | ..............................
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . Timing measurements:
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . get job = 0 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . initial setup = 2 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . payload setup = 8 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . stage-in = 0 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . payload execution = 5418 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . stage-out = 0 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | . log creation = 0 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,323 | INFO     | ..............................
[2025-07-26 12:11:25] 2025-07-26 16:10:53,396 | INFO     | 
[2025-07-26 12:11:25] 2025-07-26 16:10:53,396 | INFO     | job summary report
[2025-07-26 12:11:25] 2025-07-26 16:10:53,396 | INFO     | --------------------------------------------------
[2025-07-26 12:11:25] 2025-07-26 16:10:53,396 | INFO     | PanDA job id: 6745101848
[2025-07-26 12:11:25] 2025-07-26 16:10:53,396 | INFO     | task id: 45743349
[2025-07-26 12:11:25] 2025-07-26 16:10:53,396 | INFO     | errors: (none)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | pilot state: finished 
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | transexitcode: 0
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | exeerrorcode: 0
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | exeerrordiag: 
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | exitcode: 0
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | exitmsg: OK
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | cpuconsumptiontime: 38652 s
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | nevents: 400
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | neventsw: 0
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | pid: 125568
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | pgrp: 125568
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | corecount: 8
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | event service: False
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 5430: 2424222, 5431: 2433275, 5433: 2433275, 5438: 2433597}
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | --------------------------------------------------
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | 
[2025-07-26 12:11:25] 2025-07-26 16:10:53,397 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | job 6745101848 has completed (purged errors)
[2025-07-26 12:11:25] 2025-07-26 16:10:53,422 | INFO     | overall cleanup function is called
[2025-07-26 12:11:25] 2025-07-26 16:10:54,431 | INFO     | --- collectZombieJob: --- 10, [125568]
[2025-07-26 12:11:25] 2025-07-26 16:10:54,431 | INFO     | zombie collector waiting for pid 125568
[2025-07-26 12:11:25] 2025-07-26 16:10:54,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:11:25] 2025-07-26 16:10:54,431 | INFO     | collected zombie processes
[2025-07-26 12:11:25] 2025-07-26 16:10:54,432 | INFO     | will attempt to kill all subprocesses of pid=125568
[2025-07-26 12:11:25] 2025-07-26 16:10:54,767 | INFO     | process IDs to be killed: [125568] (in reverse order)
[2025-07-26 12:11:25] 2025-07-26 16:10:54,879 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:11:25] 2025-07-26 16:10:54,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:11:25] 2025-07-26 16:10:54,893 | INFO     | did not find any defunct processes belonging to 125568
[2025-07-26 12:11:25] 2025-07-26 16:10:54,908 | INFO     | did not find any defunct processes belonging to 125568
[2025-07-26 12:11:25] 2025-07-26 16:10:54,908 | INFO     | ready for new job
[2025-07-26 12:11:25] 2025-07-26 16:10:54,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:11:25] 2025-07-26 16:10:54,910 | INFO     | ***************************************
[2025-07-26 12:11:25] 2025-07-26 16:10:54,910 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:11:25] 2025-07-26 16:10:54,910 | INFO     | ***************************************
[2025-07-26 12:11:25] 2025-07-26 16:10:54,911 | INFO     | 
[2025-07-26 12:11:25] 2025-07-26 16:10:54,914 | INFO     | architecture information:
[2025-07-26 12:11:25] 2025-07-26 16:10:54,915 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:11:25] 2025-07-26 16:10:54,929 | INFO     | cat /etc/os-release:
[2025-07-26 12:11:25] NAME="CentOS Linux"
[2025-07-26 12:11:25] VERSION="7 (Core)"
[2025-07-26 12:11:25] ID="centos"
[2025-07-26 12:11:25] ID_LIKE="rhel fedora"
[2025-07-26 12:11:25] VERSION_ID="7"
[2025-07-26 12:11:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:11:25] ANSI_COLOR="0;31"
[2025-07-26 12:11:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:11:25] HOME_URL="https://www.centos.org/"
[2025-07-26 12:11:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:11:25] 
[2025-07-26 12:11:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:11:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:11:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:11:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:11:25] 
[2025-07-26 12:11:25] 2025-07-26 16:10:54,929 | INFO     | ***************************************
[2025-07-26 12:11:25] 2025-07-26 16:10:55,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 12:11:25] 2025-07-26 16:10:55,457 | INFO     | sufficient remaining disk space (128966459392 B)
[2025-07-26 12:11:25] 2025-07-26 16:10:55,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:11:25] 2025-07-26 16:10:55,458 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:11:25] 2025-07-26 16:10:55,458 | INFO     | update_server=False
[2025-07-26 12:11:25] 2025-07-26 16:10:55,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:11:25] 2025-07-26 16:10:56,019 | INFO     | all payload control threads have been joined
[2025-07-26 12:11:25] 2025-07-26 16:10:56,212 | INFO     | all job control threads have been joined
[2025-07-26 12:11:25] 2025-07-26 16:10:56,213 | INFO     | all data control threads have been joined
[2025-07-26 12:11:25] 2025-07-26 16:10:56,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:11:25] 2025-07-26 16:10:56,373 | INFO     | aborting loop
[2025-07-26 12:11:25] 2025-07-26 16:10:56,464 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:56,638 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:56,640 | INFO     | [job] validate thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:56,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:11:25] 2025-07-26 16:10:57,024 | INFO     | [payload] control thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,066 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,134 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,146 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,216 | INFO     | [job] control thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,219 | INFO     | [data] control thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,378 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,629 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:57,835 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:58,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:11:25] 2025-07-26 16:10:58,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:11:25] 2025-07-26 16:10:58,961 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:10:59,411 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:11:02,119 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:11:05,570 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:11:25] 2025-07-26 16:11:06,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:11:25] 2025-07-26 16:11:06,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140714359822144)>', '<ExcThread(monitor, started 140713731815168)>']
[2025-07-26 12:11:25] 2025-07-26 16:11:11,609 | INFO     | all workflow threads have been joined
[2025-07-26 12:11:25] 2025-07-26 16:11:11,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:11:25] 2025-07-26 16:11:11,611 | INFO     | traces error code: 0
[2025-07-26 12:11:25] 2025-07-26 16:11:11,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:11:25] 2025-07-26 16:11:25,076 | INFO     | PID=117695 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 12:11:25] 2025-07-26 16:11:25,076 | INFO     | .. there are 15 such processes running
[2025-07-26 12:11:25] 2025-07-26 16:11:25,077 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:11:25] 2025-07-26 16:11:25,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:11:25] 2025-07-26 16:11:25,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:11:25] 2025-07-26 16:11:25,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:11:25] 2025-07-26 16:11:25,077 | INFO     | [monitor] control thread has ended
[2025-07-26 12:11:25] 2025-07-26 16:11:25,175 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:11:25] 2025-07-26 16:11:25,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:11:25] 2025-07-26 16:11:25,186 [wrapper] pilotpid: 117695
[2025-07-26 12:11:25] 2025-07-26 16:11:25,189 [wrapper] Pilot exit status: 0
[2025-07-26 12:11:25] 2025-07-26 16:11:25,210 [wrapper] pandaids: 6745101848
[2025-07-26 12:11:25] 2025-07-26 16:11:25,284 [wrapper] cleanup supervisor_pilot  300015 117696
[2025-07-26 12:11:25] 2025-07-26 16:11:25,288 [wrapper] Test setup, not cleaning
[2025-07-26 12:11:25] 2025-07-26 16:11:25,291 [wrapper] apfmon messages muted
[2025-07-26 12:11:25] 2025-07-26 16:11:25,297 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:11:25] 2025-07-26 16:11:25,301 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:11:25]  *** Error codes and diagnostics ***
[2025-07-26 12:11:25]     "exeErrorCode": 0,
[2025-07-26 12:11:25]     "exeErrorDiag": "",
[2025-07-26 12:11:25]     "pilotErrorCode": 0,
[2025-07-26 12:11:25]     "pilotErrorDiag": "",
[2025-07-26 12:11:25]  *** Listing of results directory ***
[2025-07-26 12:11:25] total 347632
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 04:27 pilot3.tar.gz
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 04:41 queuedata.json
[2025-07-26 12:11:25] -rwx------. 1 boincer umatlas     36292 Jul 26 04:42 runpilot2-wrapper.sh
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas       100 Jul 26 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:11:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 10:39 run_atlas
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas       105 Jul 26 10:39 job.xml
[2025-07-26 12:11:25] -rw-r--r--. 2 boincer umatlas 145484094 Jul 26 10:39 EVNT.45743347._001996.pool.root.1
[2025-07-26 12:11:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:39 start_atlas.sh
[2025-07-26 12:11:25] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 10:39 shared
[2025-07-26 12:11:25] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 10:39 input.tar.gz
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas         0 Jul 26 10:39 boinc_lockfile
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 10:39 pandaJob.out
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas    980133 Jul 26 10:39 agis_schedconf.cvmfs.json
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas   1593052 Jul 26 10:39 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:11:25] drwx------. 4 boincer umatlas      4096 Jul 26 10:39 pilot3
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas      6944 Jul 26 12:01 init_data.xml
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas       530 Jul 26 12:10 boinc_task_state.xml
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas 204928147 Jul 26 12:10 HITS.45743349._035146.pool.root.1
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas      1031 Jul 26 12:10 memory_monitor_summary.json
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas    312154 Jul 26 12:10 log.45743349._035146.job.log.tgz.1
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas      7777 Jul 26 12:10 heartbeat.json
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:11 boinc_mmap_file
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:11 wrapper_checkpoint.txt
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas        95 Jul 26 12:11 pilot_heartbeat.json
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas       822 Jul 26 12:11 pilotlog.txt
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas    529587 Jul 26 12:11 log.45743349._035146.job.log.1
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas       357 Jul 26 12:11 output.list
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:11 runtime_log
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas    860160 Jul 26 12:11 result.tar.gz
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 12:11 runtime_log.err
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas       652 Jul 26 12:11 7hqLDmifpz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVT0KDm0BBzFn.diag
[2025-07-26 12:11:25] -rw-r--r--. 1 boincer umatlas     21882 Jul 26 12:11 stderr.txt
[2025-07-26 12:11:25] HITS file was successfully produced:
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas 204928147 Jul 26 12:10 shared/HITS.pool.root.1
[2025-07-26 12:11:25]  *** Contents of shared directory: ***
[2025-07-26 12:11:25] total 343600
[2025-07-26 12:11:25] -rw-r--r--. 2 boincer umatlas 145484094 Jul 26 10:39 ATLAS.root_0
[2025-07-26 12:11:25] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:39 start_atlas.sh
[2025-07-26 12:11:25] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 10:39 input.tar.gz
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas 204928147 Jul 26 12:10 HITS.pool.root.1
[2025-07-26 12:11:25] -rw-------. 1 boincer umatlas    860160 Jul 26 12:11 result.tar.gz
12:11:26 (113862): run_atlas exited; CPU time 38748.067861
12:11:26 (113862): called boinc_finish(0)

</stderr_txt>
]]>

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