Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:44 (3859840): wrapper (7.7.26015): starting
11:32:44 (3859840): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 11:32:44] Arguments: --nthreads 12
[2025-07-26 11:32:44] Threads: 12
[2025-07-26 11:32:44] Checking for CVMFS
[2025-07-26 11:32:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:32:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:32:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:32:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:32:44] 2.12.6.0 1364387 17111 314252 148782 1 157 27043526 32935936 10492 16776704 0 45561695 99.769 71138187 31733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 11:32:44] CVMFS is ok
[2025-07-26 11:32:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:32:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:32:44] Further information can be found at the LHC@home message board.
[2025-07-26 11:32:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:32:44] Checking for apptainer binary...
[2025-07-26 11:32:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:32:44] Running /usr/bin/apptainer --version
[2025-07-26 11:32:44] apptainer version 1.4.1-1.el9
[2025-07-26 11:32:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:32:45] c6-2-29-2.aglt2.org
[2025-07-26 11:32:45] apptainer works
[2025-07-26 11:32:45] Set ATHENA_PROC_NUMBER=12
[2025-07-26 11:32:45] Set ATHENA_CORE_NUMBER=12
[2025-07-26 11:32:45] Starting ATLAS job with PandaID=6745100203
[2025-07-26 11:32:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:23:02]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:23:02] 2025-07-26 17:22:26,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,795 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 13:23:02] 2025-07-26 17:22:28,814 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2715.6600178571425
[2025-07-26 13:23:02] 2025-07-26 17:22:28,823 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745100203/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,824 | INFO     | extracted standard info from prmon json
[2025-07-26 13:23:02] 2025-07-26 17:22:28,824 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 13:23:02] 2025-07-26 17:22:28,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 13:23:02] 2025-07-26 17:22:28,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:23:02] 2025-07-26 17:22:28,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:23:02] 2025-07-26 17:22:28,827 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:23:02] 2025-07-26 17:22:28,827 | INFO     | sum of square deviations: 379831751.96261716
[2025-07-26 13:23:02] 2025-07-26 17:22:28,828 | INFO     | sum of deviations: -9888532718.579441
[2025-07-26 13:23:02] 2025-07-26 17:22:28,828 | INFO     | mean x: 1753547243.0186915
[2025-07-26 13:23:02] 2025-07-26 17:22:28,828 | INFO     | mean y: 2466501.2897196263
[2025-07-26 13:23:02] 2025-07-26 17:22:28,828 | INFO     | -- intersect: 45654282592.40919
[2025-07-26 13:23:02] 2025-07-26 17:22:28,828 | INFO     | intersect: 45654282592.40919
[2025-07-26 13:23:02] 2025-07-26 17:22:28,828 | INFO     | chi2: 1.8318236990095786
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | sum of square deviations: 329031409.460785
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | sum of deviations: -5454182691.490197
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | mean x: 1753547090.5196078
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | mean y: 2479776.745098039
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | -- intersect: 29070118655.047768
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | intersect: 29070118655.047768
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | chi2: 1.8168890836389304
[2025-07-26 13:23:02] 2025-07-26 17:22:28,829 | INFO     | current chi2=1.8168890836389304 (change=0.8152867210268647 %)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | right removable region: 101
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | sum of square deviations: 329030189.460785
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | sum of deviations: -27437927238.85294
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | mean x: 1753547395.5196078
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | mean y: 2518370.6764705884
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | -- intersect: 146231367240.12482
[2025-07-26 13:23:02] 2025-07-26 17:22:28,830 | INFO     | intersect: 146231367240.12482
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | chi2: 0.17969088063919575
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | current chi2=0.17969088063919575 (change=90.19060181739378 %)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | sum of square deviations: 282972901.9587634
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | sum of deviations: -24897327153.43299
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | mean x: 1753547548.0206184
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | mean y: 2509915.216494845
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | -- intersect: 154288120586.62912
[2025-07-26 13:23:02] 2025-07-26 17:22:28,831 | INFO     | intersect: 154288120586.62912
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | chi2: 0.1731717818076787
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | current chi2=0.1731717818076787 (change=3.6279519630196795 %)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | left removable region: 20
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | sum of square deviations: 164763685.95061755
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | sum of deviations: -14437065412.802465
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | mean x: 1753547670.0246913
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | mean y: 2506478.901234568
[2025-07-26 13:23:02] 2025-07-26 17:22:28,832 | INFO     | -- intersect: 153653368745.97552
[2025-07-26 13:23:02] 2025-07-26 17:22:28,833 | INFO     | intersect: 153653368745.97552
[2025-07-26 13:23:02] 2025-07-26 17:22:28,833 | INFO     | chi2: 0.1609488803164578
[2025-07-26 13:23:02] 2025-07-26 17:22:28,833 | INFO     | -- intersect: 153653368745.97552
[2025-07-26 13:23:02] 2025-07-26 17:22:28,833 | INFO     | current memory leak: -87.62 B/s (using 81 data points, chi2=0.16)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,833 | INFO     | could have reported an average CPU frequency of 2685 MHz (7 samples)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,833 | INFO     | ..............................
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . Timing measurements:
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . get job = 0 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . initial setup = 4 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . payload setup = 8 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . stage-in = 0 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . payload execution = 6527 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . stage-out = 0 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | . log creation = 0 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,834 | INFO     | ..............................
[2025-07-26 13:23:02] 2025-07-26 17:22:28,947 | INFO     | 
[2025-07-26 13:23:02] 2025-07-26 17:22:28,947 | INFO     | job summary report
[2025-07-26 13:23:02] 2025-07-26 17:22:28,947 | INFO     | --------------------------------------------------
[2025-07-26 13:23:02] 2025-07-26 17:22:28,947 | INFO     | PanDA job id: 6745100203
[2025-07-26 13:23:02] 2025-07-26 17:22:28,947 | INFO     | task id: 45743349
[2025-07-26 13:23:02] 2025-07-26 17:22:28,947 | INFO     | errors: (none)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | pilot state: finished 
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | transexitcode: 0
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | exeerrorcode: 0
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | exeerrordiag: 
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | exitcode: 0
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | exitmsg: OK
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | cpuconsumptiontime: 49920 s
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | nevents: 400
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | neventsw: 0
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | pid: 3870757
[2025-07-26 13:23:02] 2025-07-26 17:22:28,948 | INFO     | pgrp: 3870757
[2025-07-26 13:23:02] 2025-07-26 17:22:28,949 | INFO     | corecount: 12
[2025-07-26 13:23:02] 2025-07-26 17:22:28,949 | INFO     | event service: False
[2025-07-26 13:23:02] 2025-07-26 17:22:28,949 | INFO     | sizes: {0: 2397304, 1: 2397503, 6: 2397765, 11: 2397793, 6540: 2424931, 6542: 2433929, 6545: 2434113, 6553: 2434307}
[2025-07-26 13:23:02] 2025-07-26 17:22:28,949 | INFO     | --------------------------------------------------
[2025-07-26 13:23:02] 2025-07-26 17:22:28,949 | INFO     | 
[2025-07-26 13:23:02] 2025-07-26 17:22:28,949 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 13:23:02] 2025-07-26 17:22:28,974 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,974 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,977 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:23:02] 2025-07-26 17:22:28,977 | INFO     | job 6745100203 has completed (purged errors)
[2025-07-26 13:23:02] 2025-07-26 17:22:28,977 | INFO     | overall cleanup function is called
[2025-07-26 13:23:02] 2025-07-26 17:22:29,616 | INFO     | PID=3863641 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 13:23:02] 2025-07-26 17:22:29,617 | INFO     | .. there are 20 such processes running
[2025-07-26 13:23:02] 2025-07-26 17:22:29,983 | INFO     | --- collectZombieJob: --- 10, [3870757]
[2025-07-26 13:23:02] 2025-07-26 17:22:29,985 | INFO     | zombie collector waiting for pid 3870757
[2025-07-26 13:23:02] 2025-07-26 17:22:29,985 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:23:02] 2025-07-26 17:22:29,985 | INFO     | collected zombie processes
[2025-07-26 13:23:02] 2025-07-26 17:22:29,986 | INFO     | will attempt to kill all subprocesses of pid=3870757
[2025-07-26 13:23:02] 2025-07-26 17:22:30,414 | INFO     | process IDs to be killed: [3870757] (in reverse order)
[2025-07-26 13:23:02] 2025-07-26 17:22:30,528 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:23:02] 2025-07-26 17:22:30,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:23:02] 2025-07-26 17:22:30,547 | INFO     | did not find any defunct processes belonging to 3870757
[2025-07-26 13:23:02] 2025-07-26 17:22:30,566 | INFO     | did not find any defunct processes belonging to 3870757
[2025-07-26 13:23:02] 2025-07-26 17:22:30,567 | INFO     | ready for new job
[2025-07-26 13:23:02] 2025-07-26 17:22:30,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:23:02] 2025-07-26 17:22:30,570 | INFO     | ***************************************
[2025-07-26 13:23:02] 2025-07-26 17:22:30,570 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:23:02] 2025-07-26 17:22:30,570 | INFO     | ***************************************
[2025-07-26 13:23:02] 2025-07-26 17:22:30,570 | INFO     | 
[2025-07-26 13:23:02] 2025-07-26 17:22:30,588 | INFO     | architecture information:
[2025-07-26 13:23:02] 2025-07-26 17:22:30,589 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:23:02] 2025-07-26 17:22:30,608 | INFO     | cat /etc/os-release:
[2025-07-26 13:23:02] NAME="CentOS Linux"
[2025-07-26 13:23:02] VERSION="7 (Core)"
[2025-07-26 13:23:02] ID="centos"
[2025-07-26 13:23:02] ID_LIKE="rhel fedora"
[2025-07-26 13:23:02] VERSION_ID="7"
[2025-07-26 13:23:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:23:02] ANSI_COLOR="0;31"
[2025-07-26 13:23:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:23:02] HOME_URL="https://www.centos.org/"
[2025-07-26 13:23:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:23:02] 
[2025-07-26 13:23:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:23:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:23:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:23:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:23:02] 
[2025-07-26 13:23:02] 2025-07-26 17:22:30,608 | INFO     | ***************************************
[2025-07-26 13:23:02] 2025-07-26 17:22:31,112 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 13:23:02] 2025-07-26 17:22:31,131 | INFO     | sufficient remaining disk space (76530319360 B)
[2025-07-26 13:23:02] 2025-07-26 17:22:31,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:23:02] 2025-07-26 17:22:31,131 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:23:02] 2025-07-26 17:22:31,131 | INFO     | update_server=False
[2025-07-26 13:23:02] 2025-07-26 17:22:31,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:23:02] 2025-07-26 17:22:31,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:23:02] 2025-07-26 17:22:31,132 | INFO     | aborting loop
[2025-07-26 13:23:02] 2025-07-26 17:22:31,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:23:02] 2025-07-26 17:22:31,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:23:02] 2025-07-26 17:22:31,912 | INFO     | all data control threads have been joined
[2025-07-26 13:23:02] 2025-07-26 17:22:32,136 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,138 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,149 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,197 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,260 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,275 | INFO     | all payload control threads have been joined
[2025-07-26 13:23:02] 2025-07-26 17:22:32,540 | INFO     | all job control threads have been joined
[2025-07-26 13:23:02] 2025-07-26 17:22:32,611 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,767 | INFO     | [job] validate thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,919 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:32,919 | INFO     | [data] control thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:33,138 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:33,280 | INFO     | [payload] control thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:33,348 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:33,545 | INFO     | [job] control thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:33,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:23:02] 2025-07-26 17:22:34,964 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:35,375 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:41,957 | INFO     | job.realtimelogging is not enabled
[2025-07-26 13:23:02] 2025-07-26 17:22:42,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:23:02] 2025-07-26 17:22:43,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577065969472)>', '<ExcThread(monitor, started 140576334792448)>']
[2025-07-26 13:23:02] 2025-07-26 17:22:48,626 | INFO     | all workflow threads have been joined
[2025-07-26 13:23:02] 2025-07-26 17:22:48,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:23:02] 2025-07-26 17:22:48,626 | INFO     | traces error code: 0
[2025-07-26 13:23:02] 2025-07-26 17:22:48,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:23:02] 2025-07-26 17:23:02,240 | INFO     | PID=3863641 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:23:02] 2025-07-26 17:23:02,241 | INFO     | .. there are 20 such processes running
[2025-07-26 13:23:02] 2025-07-26 17:23:02,242 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:23:02] 2025-07-26 17:23:02,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:23:02] 2025-07-26 17:23:02,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:23:02] 2025-07-26 17:23:02,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:23:02] 2025-07-26 17:23:02,242 | INFO     | [monitor] control thread has ended
[2025-07-26 13:23:02] 2025-07-26 17:23:02,493 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:23:02] 2025-07-26 17:23:02,498 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:23:02] 2025-07-26 17:23:02,501 [wrapper] pilotpid: 3863641
[2025-07-26 13:23:02] 2025-07-26 17:23:02,505 [wrapper] Pilot exit status: 0
[2025-07-26 13:23:02] 2025-07-26 17:23:02,522 [wrapper] pandaids: 6745100203
[2025-07-26 13:23:02] 2025-07-26 17:23:02,593 [wrapper] cleanup supervisor_pilot   78985 3863642
[2025-07-26 13:23:02] 2025-07-26 17:23:02,599 [wrapper] Test setup, not cleaning
[2025-07-26 13:23:02] 2025-07-26 17:23:02,602 [wrapper] apfmon messages muted
[2025-07-26 13:23:02] 2025-07-26 17:23:02,606 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:23:02] 2025-07-26 17:23:02,609 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:23:02]  *** Error codes and diagnostics ***
[2025-07-26 13:23:02]     "exeErrorCode": 0,
[2025-07-26 13:23:02]     "exeErrorDiag": "",
[2025-07-26 13:23:02]     "pilotErrorCode": 0,
[2025-07-26 13:23:02]     "pilotErrorDiag": "",
[2025-07-26 13:23:02]  *** Listing of results directory ***
[2025-07-26 13:23:02] total 360840
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 04:04 pilot3.tar.gz
[2025-07-26 13:23:02] -rwx------. 1 boincer umatlas     36292 Jul 26 04:24 runpilot2-wrapper.sh
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 04:24 queuedata.json
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:23:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:32 run_atlas
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:32 job.xml
[2025-07-26 13:23:02] -rw-r--r--. 2 boincer umatlas 147174619 Jul 26 11:32 EVNT.45743347._001975.pool.root.1
[2025-07-26 13:23:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:32 start_atlas.sh
[2025-07-26 13:23:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:32 shared
[2025-07-26 13:23:02] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 11:32 input.tar.gz
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:32 boinc_lockfile
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 11:32 pandaJob.out
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas    980133 Jul 26 11:32 agis_schedconf.cvmfs.json
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:32 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:23:02] drwx------. 4 boincer umatlas      4096 Jul 26 11:32 pilot3
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas 216461898 Jul 26 13:21 HITS.45743349._034823.pool.root.1
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:21 boinc_task_state.xml
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas      1039 Jul 26 13:22 memory_monitor_summary.json
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas    380171 Jul 26 13:22 log.45743349._034823.job.log.tgz.1
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas      6841 Jul 26 13:22 init_data.xml
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas      7824 Jul 26 13:22 heartbeat.json
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:22 boinc_mmap_file
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:22 wrapper_checkpoint.txt
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas       823 Jul 26 13:23 pilotlog.txt
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas        95 Jul 26 13:23 pilot_heartbeat.json
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas    613839 Jul 26 13:23 log.45743349._034823.job.log.1
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas       357 Jul 26 13:23 output.list
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:23 runtime_log
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas   1013760 Jul 26 13:23 result.tar.gz
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 13:23 runtime_log.err
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas       655 Jul 26 13:23 BsmNDmkNpz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkcRLDm3YpdGm.diag
[2025-07-26 13:23:02] -rw-r--r--. 1 boincer umatlas     21296 Jul 26 13:23 stderr.txt
[2025-07-26 13:23:02] HITS file was successfully produced:
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas 216461898 Jul 26 13:21 shared/HITS.pool.root.1
[2025-07-26 13:23:02]  *** Contents of shared directory: ***
[2025-07-26 13:23:02] total 356664
[2025-07-26 13:23:02] -rw-r--r--. 2 boincer umatlas 147174619 Jul 26 11:32 ATLAS.root_0
[2025-07-26 13:23:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:32 start_atlas.sh
[2025-07-26 13:23:02] -rw-r--r--. 2 boincer umatlas    542894 Jul 26 11:32 input.tar.gz
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas 216461898 Jul 26 13:21 HITS.pool.root.1
[2025-07-26 13:23:02] -rw-------. 1 boincer umatlas   1013760 Jul 26 13:23 result.tar.gz
13:23:04 (3859840): run_atlas exited; CPU time 50046.141268
13:23:04 (3859840): called boinc_finish(0)

</stderr_txt>
]]>

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