Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:50 (661372): wrapper (7.7.26015): starting
10:57:50 (661372): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 10:57:50] Arguments: --nthreads 12
[2025-07-26 10:57:50] Threads: 12
[2025-07-26 10:57:50] Checking for CVMFS
[2025-07-26 10:57:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:57:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:57:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:57:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:57:51] 2.12.6.0 3046116 17074 302916 148780 2 67 27560353 32935937 9140 16776704 1 54947676 99.757 53477700 28973 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 10:57:51] CVMFS is ok
[2025-07-26 10:57:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:57:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:57:51] Further information can be found at the LHC@home message board.
[2025-07-26 10:57:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:57:51] Checking for apptainer binary...
[2025-07-26 10:57:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:57:51] Running /usr/bin/apptainer --version
[2025-07-26 10:57:51] apptainer version 1.4.1-1.el9
[2025-07-26 10:57:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:57:51] c6-1-26-4.aglt2.org
[2025-07-26 10:57:51] apptainer works
[2025-07-26 10:57:51] Set ATHENA_PROC_NUMBER=12
[2025-07-26 10:57:51] Set ATHENA_CORE_NUMBER=12
[2025-07-26 10:57:51] Starting ATLAS job with PandaID=6745056955
[2025-07-26 10:57:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:11:43]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:11:43]  is_tar=False
[2025-07-26 12:11:43]  lfn=log.45743349._022760.job.log.tgz.1
[2025-07-26 12:11:43]  mtime=0
[2025-07-26 12:11:43]  protocol_id=None
[2025-07-26 12:11:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 12:11:43]  replicas=None
[2025-07-26 12:11:43]  scope=mc23_13p6TeV
[2025-07-26 12:11:43]  status=None
[2025-07-26 12:11:43]  status_code=0
[2025-07-26 12:11:43]  storage_token=
[2025-07-26 12:11:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745056955/log.45743349._022760.job.log.tgz.1
[2025-07-26 12:11:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/54/log.45743349._022760.job.log.tgz.1
[2025-07-26 12:11:43]  workdir=None
[2025-07-26 12:11:43] ]
[2025-07-26 12:11:43] 2025-07-26 16:11:18,172 | INFO     | transferring file log.45743349._022760.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745056955/log.45743349._022760.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:11:43] 2025-07-26 16:11:18,172 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745056955/log.45743349._022760.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._022760.job
[2025-07-26 12:11:43] 2025-07-26 16:11:18,192 | INFO     | adding to output.list: log.45743349._022760.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/54/log.45743349._022760.job.log.tg
[2025-07-26 12:11:43] 2025-07-26 16:11:18,193 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:11:43] 2025-07-26 16:11:18,193 | INFO     | summary of transferred files:
[2025-07-26 12:11:43] 2025-07-26 16:11:18,194 | INFO     |  -- lfn=log.45743349._022760.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:11:43] 2025-07-26 16:11:18,194 | INFO     | stage-out finished correctly
[2025-07-26 12:11:43] 2025-07-26 16:11:18,872 | INFO     | PID=664982 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:11:43] 2025-07-26 16:11:18,872 | INFO     | .. there are 13 such processes running
[2025-07-26 12:11:43] 2025-07-26 16:11:19,143 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:11:43] 2025-07-26 16:11:19,212 | INFO     | job 6745056955 has state=finished
[2025-07-26 12:11:43] 2025-07-26 16:11:19,212 | INFO     | preparing for final server update for job 6745056955 in state='finished'
[2025-07-26 12:11:43] 2025-07-26 16:11:19,212 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:11:43] 2025-07-26 16:11:19,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:11:43] 2025-07-26 16:11:19,213 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:11:43] 2025-07-26 16:11:19,213 | INFO     | job 6745056955 has finished - writing final server update
[2025-07-26 12:11:43] 2025-07-26 16:11:19,213 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:11:43] 2025-07-26 16:11:19,214 | INFO     | executing command: lscpu
[2025-07-26 12:11:43] 2025-07-26 16:11:19,267 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:11:43] 2025-07-26 16:11:20,251 | INFO     | monitor loop #326: job 0:6745056955 is in state 'finished'
[2025-07-26 12:11:43] 2025-07-26 16:11:20,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:11:43] 2025-07-26 16:11:22,753 | INFO     | monitor loop #327: job 0:6745056955 is in state 'finished'
[2025-07-26 12:11:43] 2025-07-26 16:11:22,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,811 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 12:11:43] 2025-07-26 16:11:23,814 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2645.300035714286
[2025-07-26 12:11:43] 2025-07-26 16:11:23,823 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745056955/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,824 | INFO     | extracted standard info from prmon json
[2025-07-26 12:11:43] 2025-07-26 16:11:23,824 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:11:43] 2025-07-26 16:11:23,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:11:43] 2025-07-26 16:11:23,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:11:43] 2025-07-26 16:11:23,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:11:43] 2025-07-26 16:11:23,826 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:11:43] 2025-07-26 16:11:23,826 | INFO     | sum of square deviations: 85136480.0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | sum of deviations: -6337980824.999999
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | mean x: 1753544169.0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | mean y: 2464376.2615384613
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | -- intersect: 130544968822.21182
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | intersect: 130544968822.21182
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | chi2: 0.14530765507316826
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | -- intersect: 130544968822.21182
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | current memory leak: -74.44 B/s (using 65 data points, chi2=0.15)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | could have reported an average CPU frequency of 2761 MHz (6 samples)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | ..............................
[2025-07-26 12:11:43] 2025-07-26 16:11:23,827 | INFO     | . Timing measurements:
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . get job = 0 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . initial setup = 3 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . payload setup = 7 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . stage-in = 0 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . payload execution = 4365 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . stage-out = 0 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | . log creation = 0 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,828 | INFO     | ..............................
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | 
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | job summary report
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | --------------------------------------------------
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | PanDA job id: 6745056955
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | task id: 45743349
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | errors: (none)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | pilot state: finished 
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | transexitcode: 0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | exeerrorcode: 0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,903 | INFO     | exeerrordiag: 
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | exitcode: 0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | exitmsg: OK
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | cpuconsumptiontime: 47196 s
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | nevents: 400
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | neventsw: 0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | pid: 671821
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | pgrp: 671821
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | corecount: 12
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | event service: False
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | sizes: {0: 2397246, 1: 2397501, 6: 2397763, 12: 2397791, 4376: 2423784, 4378: 2432782, 4379: 2432966, 4384: 2433160}
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | --------------------------------------------------
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | 
[2025-07-26 12:11:43] 2025-07-26 16:11:23,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 12:11:43] 2025-07-26 16:11:23,922 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:11:43] 2025-07-26 16:11:23,924 | INFO     | job 6745056955 has completed (purged errors)
[2025-07-26 12:11:43] 2025-07-26 16:11:23,924 | INFO     | overall cleanup function is called
[2025-07-26 12:11:43] 2025-07-26 16:11:24,930 | INFO     | --- collectZombieJob: --- 10, [671821]
[2025-07-26 12:11:43] 2025-07-26 16:11:24,931 | INFO     | zombie collector waiting for pid 671821
[2025-07-26 12:11:43] 2025-07-26 16:11:24,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:11:43] 2025-07-26 16:11:24,931 | INFO     | collected zombie processes
[2025-07-26 12:11:43] 2025-07-26 16:11:24,931 | INFO     | will attempt to kill all subprocesses of pid=671821
[2025-07-26 12:11:43] 2025-07-26 16:11:25,185 | INFO     | process IDs to be killed: [671821] (in reverse order)
[2025-07-26 12:11:43] 2025-07-26 16:11:25,288 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:11:43] 2025-07-26 16:11:25,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:11:43] 2025-07-26 16:11:25,298 | INFO     | did not find any defunct processes belonging to 671821
[2025-07-26 12:11:43] 2025-07-26 16:11:25,309 | INFO     | did not find any defunct processes belonging to 671821
[2025-07-26 12:11:43] 2025-07-26 16:11:25,309 | INFO     | ready for new job
[2025-07-26 12:11:43] 2025-07-26 16:11:25,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:11:43] 2025-07-26 16:11:25,311 | INFO     | ***************************************
[2025-07-26 12:11:43] 2025-07-26 16:11:25,311 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:11:43] 2025-07-26 16:11:25,311 | INFO     | ***************************************
[2025-07-26 12:11:43] 2025-07-26 16:11:25,311 | INFO     | 
[2025-07-26 12:11:43] 2025-07-26 16:11:25,326 | INFO     | architecture information:
[2025-07-26 12:11:43] 2025-07-26 16:11:25,327 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:11:43] 2025-07-26 16:11:25,343 | INFO     | cat /etc/os-release:
[2025-07-26 12:11:43] NAME="CentOS Linux"
[2025-07-26 12:11:43] VERSION="7 (Core)"
[2025-07-26 12:11:43] ID="centos"
[2025-07-26 12:11:43] ID_LIKE="rhel fedora"
[2025-07-26 12:11:43] VERSION_ID="7"
[2025-07-26 12:11:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:11:43] ANSI_COLOR="0;31"
[2025-07-26 12:11:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:11:43] HOME_URL="https://www.centos.org/"
[2025-07-26 12:11:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:11:43] 
[2025-07-26 12:11:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:11:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:11:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:11:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:11:43] 
[2025-07-26 12:11:43] 2025-07-26 16:11:25,344 | INFO     | ***************************************
[2025-07-26 12:11:43] 2025-07-26 16:11:25,847 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 12:11:43] 2025-07-26 16:11:25,865 | INFO     | sufficient remaining disk space (76357304320 B)
[2025-07-26 12:11:43] 2025-07-26 16:11:25,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:11:43] 2025-07-26 16:11:25,866 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:11:43] 2025-07-26 16:11:25,866 | INFO     | update_server=False
[2025-07-26 12:11:43] 2025-07-26 16:11:25,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:11:43] 2025-07-26 16:11:25,867 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 12:11:43] 2025-07-26 16:11:25,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:11:43] 2025-07-26 16:11:25,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:11:43] 2025-07-26 16:11:25,867 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:11:43] 2025-07-26 16:11:25,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:11:43] 2025-07-26 16:11:25,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:11:43] 2025-07-26 16:11:25,882 | INFO     | all payload control threads have been joined
[2025-07-26 12:11:43] 2025-07-26 16:11:26,183 | INFO     | all data control threads have been joined
[2025-07-26 12:11:43] 2025-07-26 16:11:26,261 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:11:43] 2025-07-26 16:11:26,262 | INFO     | aborting loop
[2025-07-26 12:11:43] 2025-07-26 16:11:26,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:11:43] 2025-07-26 16:11:26,795 | INFO     | all job control threads have been joined
[2025-07-26 12:11:43] 2025-07-26 16:11:26,872 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:26,873 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:26,873 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:26,888 | INFO     | [payload] control thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,159 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,165 | INFO     | [job] validate thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,189 | INFO     | [data] control thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,267 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,410 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,703 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,703 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,800 | INFO     | [job] control thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:27,969 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:28,275 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:29,872 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:36,858 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:11:43] 2025-07-26 16:11:37,863 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:11:43] 2025-07-26 16:11:38,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568910833472)>', '<ExcThread(monitor, started 140568407553792)>']
[2025-07-26 12:11:43] 2025-07-26 16:11:38,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:11:43] 2025-07-26 16:11:38,933 | INFO     | [monitor] control thread has ended
[2025-07-26 12:11:43] 2025-07-26 16:11:43,410 | INFO     | all workflow threads have been joined
[2025-07-26 12:11:43] 2025-07-26 16:11:43,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:11:43] 2025-07-26 16:11:43,411 | INFO     | traces error code: 0
[2025-07-26 12:11:43] 2025-07-26 16:11:43,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:11:43] 2025-07-26 16:11:43,584 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:11:43] 2025-07-26 16:11:43,587 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:11:43] 2025-07-26 16:11:43,591 [wrapper] pilotpid: 664982
[2025-07-26 12:11:43] 2025-07-26 16:11:43,594 [wrapper] Pilot exit status: 0
[2025-07-26 12:11:43] 2025-07-26 16:11:43,609 [wrapper] pandaids: 6745056955
[2025-07-26 12:11:43] 2025-07-26 16:11:43,682 [wrapper] cleanup supervisor_pilot 1019841 664983
[2025-07-26 12:11:43] 2025-07-26 16:11:43,686 [wrapper] Test setup, not cleaning
[2025-07-26 12:11:43] 2025-07-26 16:11:43,689 [wrapper] apfmon messages muted
[2025-07-26 12:11:43] 2025-07-26 16:11:43,693 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:11:43] 2025-07-26 16:11:43,697 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:11:43]  *** Error codes and diagnostics ***
[2025-07-26 12:11:43]     "exeErrorCode": 0,
[2025-07-26 12:11:43]     "exeErrorDiag": "",
[2025-07-26 12:11:43]     "pilotErrorCode": 0,
[2025-07-26 12:11:43]     "pilotErrorDiag": "",
[2025-07-26 12:11:43]  *** Listing of results directory ***
[2025-07-26 12:11:43] total 429180
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 10:33 pilot3.tar.gz
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 10:57 queuedata.json
[2025-07-26 12:11:43] -rwx------. 1 boincer umatlas     36292 Jul 25 11:00 runpilot2-wrapper.sh
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas       100 Jul 26 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:11:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 10:57 run_atlas
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas       105 Jul 26 10:57 job.xml
[2025-07-26 12:11:43] -rw-r--r--. 2 boincer umatlas 227958001 Jul 26 10:57 EVNT.45743347._001284.pool.root.1
[2025-07-26 12:11:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:57 start_atlas.sh
[2025-07-26 12:11:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 10:57 shared
[2025-07-26 12:11:43] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 10:57 input.tar.gz
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas         0 Jul 26 10:57 boinc_lockfile
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 10:57 pandaJob.out
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas    980133 Jul 26 10:58 agis_schedconf.cvmfs.json
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas   1593052 Jul 26 10:58 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:11:43] drwx------. 4 boincer umatlas      4096 Jul 26 10:58 pilot3
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas      6840 Jul 26 12:10 init_data.xml
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas        95 Jul 26 12:10 pilot_heartbeat.json
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas 206008189 Jul 26 12:10 HITS.45743349._022760.pool.root.1
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:10 boinc_task_state.xml
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas      1052 Jul 26 12:11 memory_monitor_summary.json
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas    377733 Jul 26 12:11 log.45743349._022760.job.log.tgz.1
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas      7828 Jul 26 12:11 heartbeat.json
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:11 wrapper_checkpoint.txt
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:11 boinc_mmap_file
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas      4552 Jul 26 12:11 pilotlog.txt
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas    439102 Jul 26 12:11 log.45743349._022760.job.log.1
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas       357 Jul 26 12:11 output.list
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:11 runtime_log
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas    839680 Jul 26 12:11 result.tar.gz
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 12:11 runtime_log.err
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas       654 Jul 26 12:11 Dj9MDmA5Yz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHnPLDmMheBln.diag
[2025-07-26 12:11:43] -rw-r--r--. 1 boincer umatlas     21582 Jul 26 12:11 stderr.txt
[2025-07-26 12:11:43] HITS file was successfully produced:
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas 206008189 Jul 26 12:10 shared/HITS.pool.root.1
[2025-07-26 12:11:43]  *** Contents of shared directory: ***
[2025-07-26 12:11:43] total 425168
[2025-07-26 12:11:43] -rw-r--r--. 2 boincer umatlas 227958001 Jul 26 10:57 ATLAS.root_0
[2025-07-26 12:11:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:57 start_atlas.sh
[2025-07-26 12:11:43] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 10:57 input.tar.gz
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas 206008189 Jul 26 12:10 HITS.pool.root.1
[2025-07-26 12:11:43] -rw-------. 1 boincer umatlas    839680 Jul 26 12:11 result.tar.gz
12:11:44 (661372): run_atlas exited; CPU time 47242.298784
12:11:44 (661372): called boinc_finish(0)

</stderr_txt>
]]>

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