Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:37 (4141): wrapper (7.7.26015): starting
09:35:37 (4141): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 09:35:37] Arguments: --nthreads 8
[2025-07-26 09:35:37] Threads: 8
[2025-07-26 09:35:37] Checking for CVMFS
[2025-07-26 09:35:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:35:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:35:37] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:35:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:35:37] 2.11.2.0 2800 110629 108120 148778 0 56 13646335 20275201 1 130560 0 29821308 99.953 11102144 11509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 09:35:37] CVMFS is ok
[2025-07-26 09:35:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:35:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:35:37] Further information can be found at the LHC@home message board.
[2025-07-26 09:35:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:35:37] Checking for apptainer binary...
[2025-07-26 09:35:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:35:37] Running /usr/bin/apptainer --version
[2025-07-26 09:35:37] apptainer version 1.3.2-1.el7
[2025-07-26 09:35:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:35:39] c-204-36.aglt2.org
[2025-07-26 09:35:39] apptainer works
[2025-07-26 09:35:39] Set ATHENA_PROC_NUMBER=8
[2025-07-26 09:35:39] Set ATHENA_CORE_NUMBER=8
[2025-07-26 09:35:39] Starting ATLAS job with PandaID=6745133407
[2025-07-26 09:35:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:00:02]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:00:02] 2025-07-26 15:59:25,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:00:02] 2025-07-26 15:59:28,292 | INFO     | monitor loop #634: job 0:6745133407 is in state 'finished'
[2025-07-26 12:00:02] 2025-07-26 15:59:28,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:00:02] 2025-07-26 15:59:28,418 | INFO     | PID=7752 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 12:00:02] 2025-07-26 15:59:29,802 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 12:00:02] 2025-07-26 15:59:29,806 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-07-26 12:00:02] 2025-07-26 15:59:29,808 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745133407/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,809 | INFO     | extracted standard info from prmon json
[2025-07-26 12:00:02] 2025-07-26 15:59:29,809 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:00:02] 2025-07-26 15:59:29,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:00:02] 2025-07-26 15:59:29,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:00:02] 2025-07-26 15:59:29,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:00:02] 2025-07-26 15:59:29,813 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:00:02] 2025-07-26 15:59:29,814 | INFO     | sum of square deviations: 869188390.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,815 | INFO     | sum of deviations: 2171424930.000004
[2025-07-26 12:00:02] 2025-07-26 15:59:29,815 | INFO     | mean x: 1753541256.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,815 | INFO     | mean y: 2525913.7730496456
[2025-07-26 12:00:02] 2025-07-26 15:59:29,815 | INFO     | -- intersect: -4378208162.831355
[2025-07-26 12:00:02] 2025-07-26 15:59:29,815 | INFO     | intersect: -4378208162.831355
[2025-07-26 12:00:02] 2025-07-26 15:59:29,816 | INFO     | chi2: 1.555937986706708
[2025-07-26 12:00:02] 2025-07-26 15:59:29,816 | INFO     | sum of square deviations: 779958810.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,817 | INFO     | sum of deviations: 2156812959.4999976
[2025-07-26 12:00:02] 2025-07-26 15:59:29,817 | INFO     | mean x: 1753541103.5
[2025-07-26 12:00:02] 2025-07-26 15:59:29,817 | INFO     | mean y: 2525893.8161764704
[2025-07-26 12:00:02] 2025-07-26 15:59:29,817 | INFO     | -- intersect: -4846525272.161072
[2025-07-26 12:00:02] 2025-07-26 15:59:29,818 | INFO     | intersect: -4846525272.161072
[2025-07-26 12:00:02] 2025-07-26 15:59:29,818 | INFO     | chi2: 1.5566157960905767
[2025-07-26 12:00:02] 2025-07-26 15:59:29,818 | INFO     | current chi2=1.5566157960905767 (change=-0.0435627505504433 %)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,818 | INFO     | right removable region: 135
[2025-07-26 12:00:02] 2025-07-26 15:59:29,818 | INFO     | sum of square deviations: 779958810.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,819 | INFO     | sum of deviations: -18500375392.499996
[2025-07-26 12:00:02] 2025-07-26 15:59:29,819 | INFO     | mean x: 1753541408.5
[2025-07-26 12:00:02] 2025-07-26 15:59:29,819 | INFO     | mean y: 2560658.007352941
[2025-07-26 12:00:02] 2025-07-26 15:59:29,819 | INFO     | -- intersect: 41596006244.631584
[2025-07-26 12:00:02] 2025-07-26 15:59:29,819 | INFO     | intersect: 41596006244.631584
[2025-07-26 12:00:02] 2025-07-26 15:59:29,820 | INFO     | chi2: 0.13843736292989345
[2025-07-26 12:00:02] 2025-07-26 15:59:29,820 | INFO     | current chi2=0.13843736292989345 (change=91.10264264304587 %)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,820 | INFO     | sum of square deviations: 697054930.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,821 | INFO     | sum of deviations: -17627981117.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,821 | INFO     | mean x: 1753541561.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,821 | INFO     | mean y: 2558944.755725191
[2025-07-26 12:00:02] 2025-07-26 15:59:29,821 | INFO     | -- intersect: 44348271448.6221
[2025-07-26 12:00:02] 2025-07-26 15:59:29,821 | INFO     | intersect: 44348271448.6221
[2025-07-26 12:00:02] 2025-07-26 15:59:29,822 | INFO     | chi2: 0.11949083787647953
[2025-07-26 12:00:02] 2025-07-26 15:59:29,822 | INFO     | current chi2=0.11949083787647953 (change=13.685991016029893 %)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,822 | INFO     | left removable region: 20
[2025-07-26 12:00:02] 2025-07-26 15:59:29,822 | INFO     | sum of square deviations: 471562330.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | sum of deviations: -9110125154.000002
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | mean x: 1753541683.0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | mean y: 2542888.9565217393
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | -- intersect: 33879261147.78308
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | intersect: 33879261147.78308
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | chi2: 0.09345205967998362
[2025-07-26 12:00:02] 2025-07-26 15:59:29,823 | INFO     | -- intersect: 33879261147.78308
[2025-07-26 12:00:02] 2025-07-26 15:59:29,824 | INFO     | current memory leak: -19.32 B/s (using 115 data points, chi2=0.09)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,824 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,824 | INFO     | ..............................
[2025-07-26 12:00:02] 2025-07-26 15:59:29,824 | INFO     | . Timing measurements:
[2025-07-26 12:00:02] 2025-07-26 15:59:29,824 | INFO     | . get job = 0 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,824 | INFO     | . initial setup = 2 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,825 | INFO     | . payload setup = 10 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,825 | INFO     | . stage-in = 0 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,825 | INFO     | . payload execution = 8574 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,825 | INFO     | . stage-out = 0 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,825 | INFO     | . log creation = 0 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,825 | INFO     | ..............................
[2025-07-26 12:00:02] 2025-07-26 15:59:29,919 | INFO     | 
[2025-07-26 12:00:02] 2025-07-26 15:59:29,919 | INFO     | job summary report
[2025-07-26 12:00:02] 2025-07-26 15:59:29,919 | INFO     | --------------------------------------------------
[2025-07-26 12:00:02] 2025-07-26 15:59:29,919 | INFO     | PanDA job id: 6745133407
[2025-07-26 12:00:02] 2025-07-26 15:59:29,920 | INFO     | task id: 45743349
[2025-07-26 12:00:02] 2025-07-26 15:59:29,920 | INFO     | errors: (none)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,920 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:00:02] 2025-07-26 15:59:29,920 | INFO     | pilot state: finished 
[2025-07-26 12:00:02] 2025-07-26 15:59:29,920 | INFO     | transexitcode: 0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,920 | INFO     | exeerrorcode: 0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,921 | INFO     | exeerrordiag: 
[2025-07-26 12:00:02] 2025-07-26 15:59:29,921 | INFO     | exitcode: 0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,921 | INFO     | exitmsg: OK
[2025-07-26 12:00:02] 2025-07-26 15:59:29,921 | INFO     | cpuconsumptiontime: 64268 s
[2025-07-26 12:00:02] 2025-07-26 15:59:29,921 | INFO     | nevents: 400
[2025-07-26 12:00:02] 2025-07-26 15:59:29,921 | INFO     | neventsw: 0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,922 | INFO     | pid: 14344
[2025-07-26 12:00:02] 2025-07-26 15:59:29,922 | INFO     | pgrp: 14344
[2025-07-26 12:00:02] 2025-07-26 15:59:29,922 | INFO     | corecount: 8
[2025-07-26 12:00:02] 2025-07-26 15:59:29,922 | INFO     | event service: False
[2025-07-26 12:00:02] 2025-07-26 15:59:29,922 | INFO     | sizes: {0: 2397469, 1: 2397497, 6: 2397759, 11: 2397787, 8588: 2425776, 8589: 2425775, 8590: 2434957, 8591: 2435013, 8599: 2435207}
[2025-07-26 12:00:02] 2025-07-26 15:59:29,923 | INFO     | --------------------------------------------------
[2025-07-26 12:00:02] 2025-07-26 15:59:29,923 | INFO     | 
[2025-07-26 12:00:02] 2025-07-26 15:59:29,923 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 12:00:02] 2025-07-26 15:59:29,948 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,948 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,948 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,949 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,951 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:00:02] 2025-07-26 15:59:29,952 | INFO     | job 6745133407 has completed (purged errors)
[2025-07-26 12:00:02] 2025-07-26 15:59:29,952 | INFO     | overall cleanup function is called
[2025-07-26 12:00:02] 2025-07-26 15:59:30,960 | INFO     | --- collectZombieJob: --- 10, [14344]
[2025-07-26 12:00:02] 2025-07-26 15:59:30,960 | INFO     | zombie collector waiting for pid 14344
[2025-07-26 12:00:02] 2025-07-26 15:59:30,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:00:02] 2025-07-26 15:59:30,961 | INFO     | collected zombie processes
[2025-07-26 12:00:02] 2025-07-26 15:59:30,961 | INFO     | will attempt to kill all subprocesses of pid=14344
[2025-07-26 12:00:02] 2025-07-26 15:59:31,054 | INFO     | process IDs to be killed: [14344] (in reverse order)
[2025-07-26 12:00:02] 2025-07-26 15:59:31,109 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:00:02] 2025-07-26 15:59:31,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:00:02] 2025-07-26 15:59:31,114 | INFO     | did not find any defunct processes belonging to 14344
[2025-07-26 12:00:02] 2025-07-26 15:59:31,118 | INFO     | did not find any defunct processes belonging to 14344
[2025-07-26 12:00:02] 2025-07-26 15:59:31,118 | INFO     | ready for new job
[2025-07-26 12:00:02] 2025-07-26 15:59:31,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:00:02] 2025-07-26 15:59:31,119 | INFO     | ***************************************
[2025-07-26 12:00:02] 2025-07-26 15:59:31,120 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:00:02] 2025-07-26 15:59:31,120 | INFO     | ***************************************
[2025-07-26 12:00:02] 2025-07-26 15:59:31,120 | INFO     | 
[2025-07-26 12:00:02] 2025-07-26 15:59:31,120 | INFO     | architecture information:
[2025-07-26 12:00:02] 2025-07-26 15:59:31,121 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:00:02] 2025-07-26 15:59:31,137 | INFO     | cat /etc/os-release:
[2025-07-26 12:00:02] NAME="CentOS Linux"
[2025-07-26 12:00:02] VERSION="7 (Core)"
[2025-07-26 12:00:02] ID="centos"
[2025-07-26 12:00:02] ID_LIKE="rhel fedora"
[2025-07-26 12:00:02] VERSION_ID="7"
[2025-07-26 12:00:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:00:02] ANSI_COLOR="0;31"
[2025-07-26 12:00:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:00:02] HOME_URL="https://www.centos.org/"
[2025-07-26 12:00:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:00:02] 
[2025-07-26 12:00:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:00:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:00:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:00:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:00:02] 
[2025-07-26 12:00:02] 2025-07-26 15:59:31,137 | INFO     | ***************************************
[2025-07-26 12:00:02] 2025-07-26 15:59:31,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 12:00:02] 2025-07-26 15:59:31,661 | INFO     | sufficient remaining disk space (18710790144 B)
[2025-07-26 12:00:02] 2025-07-26 15:59:31,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:00:02] 2025-07-26 15:59:31,662 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:00:02] 2025-07-26 15:59:31,662 | INFO     | update_server=False
[2025-07-26 12:00:02] 2025-07-26 15:59:31,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:00:02] 2025-07-26 15:59:31,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:00:02] 2025-07-26 15:59:31,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:00:02] 2025-07-26 15:59:31,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:00:02] 2025-07-26 15:59:31,795 | INFO     | aborting loop
[2025-07-26 12:00:02] 2025-07-26 15:59:32,489 | INFO     | all data control threads have been joined
[2025-07-26 12:00:02] 2025-07-26 15:59:32,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:00:02] 2025-07-26 15:59:32,668 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:32,669 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:32,685 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:32,797 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:32,925 | INFO     | all payload control threads have been joined
[2025-07-26 12:00:02] 2025-07-26 15:59:32,949 | INFO     | all job control threads have been joined
[2025-07-26 12:00:02] 2025-07-26 15:59:32,981 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,020 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,026 | INFO     | [job] validate thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,303 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,494 | INFO     | [data] control thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,668 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,684 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,851 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,928 | INFO     | [payload] control thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:33,954 | INFO     | [job] control thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:36,588 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:42,551 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:00:02] 2025-07-26 15:59:43,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:00:02] 2025-07-26 15:59:43,646 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604678596416)>', '<ExcThread(monitor, started 140603874604800)>']
[2025-07-26 12:00:02] 2025-07-26 15:59:48,654 | INFO     | all workflow threads have been joined
[2025-07-26 12:00:02] 2025-07-26 15:59:48,654 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:00:02] 2025-07-26 15:59:48,655 | INFO     | traces error code: 0
[2025-07-26 12:00:02] 2025-07-26 15:59:48,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:00:02] 2025-07-26 16:00:02,621 | INFO     | PID=7752 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 12:00:02] 2025-07-26 16:00:02,621 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:00:02] 2025-07-26 16:00:02,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:00:02] 2025-07-26 16:00:02,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:00:02] 2025-07-26 16:00:02,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:00:02] 2025-07-26 16:00:02,622 | INFO     | [monitor] control thread has ended
[2025-07-26 12:00:02] 2025-07-26 16:00:02,721 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:00:02] 2025-07-26 16:00:02,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:00:02] 2025-07-26 16:00:02,729 [wrapper] pilotpid: 7752
[2025-07-26 12:00:02] 2025-07-26 16:00:02,733 [wrapper] Pilot exit status: 0
[2025-07-26 12:00:02] 2025-07-26 16:00:02,751 [wrapper] pandaids: 6745133407
[2025-07-26 12:00:02] 2025-07-26 16:00:02,794 [wrapper] cleanup supervisor_pilot 21711 7753
[2025-07-26 12:00:02] 2025-07-26 16:00:02,798 [wrapper] Test setup, not cleaning
[2025-07-26 12:00:02] 2025-07-26 16:00:02,803 [wrapper] apfmon messages muted
[2025-07-26 12:00:02] 2025-07-26 16:00:02,808 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:00:02] 2025-07-26 16:00:02,812 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:00:02]  *** Error codes and diagnostics ***
[2025-07-26 12:00:02]     "exeErrorCode": 0,
[2025-07-26 12:00:02]     "exeErrorDiag": "",
[2025-07-26 12:00:02]     "pilotErrorCode": 0,
[2025-07-26 12:00:02]     "pilotErrorDiag": "",
[2025-07-26 12:00:02]  *** Listing of results directory ***
[2025-07-26 12:00:02] total 351148
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 06:53 pilot3.tar.gz
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 07:01 queuedata.json
[2025-07-26 12:00:02] -rwx------ 1 boincer umatlas     36292 Jul 26 07:01 runpilot2-wrapper.sh
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas       100 Jul 26 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:00:02] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 09:35 run_atlas
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas       105 Jul 26 09:35 job.xml
[2025-07-26 12:00:02] -rw-r--r-- 2 boincer umatlas 143588561 Jul 26 09:35 EVNT.45743347._002092.pool.root.1
[2025-07-26 12:00:02] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 09:35 start_atlas.sh
[2025-07-26 12:00:02] drwxrwx--x 2 boincer umatlas      4096 Jul 26 09:35 shared
[2025-07-26 12:00:02] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 09:35 input.tar.gz
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas         0 Jul 26 09:35 boinc_lockfile
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas      2560 Jul 26 09:35 pandaJob.out
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas    980133 Jul 26 09:35 agis_schedconf.cvmfs.json
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas   1593052 Jul 26 09:35 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:00:02] drwx------ 4 boincer umatlas      4096 Jul 26 09:35 pilot3
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas      5904 Jul 26 11:57 init_data.xml
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas 209897122 Jul 26 11:58 HITS.45743349._036666.pool.root.1
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas       529 Jul 26 11:59 boinc_task_state.xml
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas      1050 Jul 26 11:59 memory_monitor_summary.json
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas    326062 Jul 26 11:59 log.45743349._036666.job.log.tgz.1
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas      7839 Jul 26 11:59 heartbeat.json
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas        27 Jul 26 11:59 wrapper_checkpoint.txt
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 11:59 boinc_mmap_file
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas        95 Jul 26 12:00 pilot_heartbeat.json
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas       744 Jul 26 12:00 pilotlog.txt
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas    779774 Jul 26 12:00 log.45743349._036666.job.log.1
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas       357 Jul 26 12:00 output.list
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas       620 Jul 26 12:00 runtime_log
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas   1126400 Jul 26 12:00 result.tar.gz
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas       660 Jul 26 12:00 yt9KDm1prz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6tRLDmU9L6Ao.diag
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas      8660 Jul 26 12:00 runtime_log.err
[2025-07-26 12:00:02] -rw-r--r-- 1 boincer umatlas     21248 Jul 26 12:00 stderr.txt
[2025-07-26 12:00:02] HITS file was successfully produced:
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas 209897122 Jul 26 11:58 shared/HITS.pool.root.1
[2025-07-26 12:00:02]  *** Contents of shared directory: ***
[2025-07-26 12:00:02] total 346860
[2025-07-26 12:00:02] -rw-r--r-- 2 boincer umatlas 143588561 Jul 26 09:35 ATLAS.root_0
[2025-07-26 12:00:02] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 09:35 start_atlas.sh
[2025-07-26 12:00:02] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 09:35 input.tar.gz
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas 209897122 Jul 26 11:58 HITS.pool.root.1
[2025-07-26 12:00:02] -rw------- 1 boincer umatlas   1126400 Jul 26 12:00 result.tar.gz
12:00:04 (4141): run_atlas exited; CPU time 64206.068121
12:00:04 (4141): called boinc_finish(0)

</stderr_txt>
]]>

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