Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:04 (1436188): wrapper (7.7.26015): starting
09:58:04 (1436188): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 09:58:04] Arguments: --nthreads 8
[2025-07-26 09:58:04] Threads: 8
[2025-07-26 09:58:04] Checking for CVMFS
[2025-07-26 09:58:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:58:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:58:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:58:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:58:04] 2.13.0.0 1483043 17030 253400 148778 0 478 38887484 40960000 17372 16776704 0 77466027 99.680 93080401 19252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 09:58:04] CVMFS is ok
[2025-07-26 09:58:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:58:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:58:04] Further information can be found at the LHC@home message board.
[2025-07-26 09:58:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:58:04] Checking for apptainer binary...
[2025-07-26 09:58:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:58:04] Running /usr/bin/apptainer --version
[2025-07-26 09:58:04] apptainer version 1.4.1-1.el9
[2025-07-26 09:58:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:58:04] c7-4-30.aglt2.org
[2025-07-26 09:58:04] apptainer works
[2025-07-26 09:58:04] Set ATHENA_PROC_NUMBER=8
[2025-07-26 09:58:04] Set ATHENA_CORE_NUMBER=8
[2025-07-26 09:58:04] Starting ATLAS job with PandaID=6745094817
[2025-07-26 09:58:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 11:24:19]  *** The last 200 lines of the pilot log: ***
[2025-07-26 11:24:19]  is_tar=False
[2025-07-26 11:24:19]  lfn=log.45743349._031334.job.log.tgz.1
[2025-07-26 11:24:19]  mtime=0
[2025-07-26 11:24:19]  protocol_id=None
[2025-07-26 11:24:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 11:24:19]  replicas=None
[2025-07-26 11:24:19]  scope=mc23_13p6TeV
[2025-07-26 11:24:19]  status=None
[2025-07-26 11:24:19]  status_code=0
[2025-07-26 11:24:19]  storage_token=
[2025-07-26 11:24:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745094817/log.45743349._031334.job.log.tgz.1
[2025-07-26 11:24:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/4c/log.45743349._031334.job.log.tgz.1
[2025-07-26 11:24:19]  workdir=None
[2025-07-26 11:24:19] ]
[2025-07-26 11:24:19] 2025-07-26 15:23:38,658 | INFO     | transferring file log.45743349._031334.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745094817/log.45743349._031334.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 11:24:19] 2025-07-26 15:23:38,658 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745094817/log.45743349._031334.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._031334.job
[2025-07-26 11:24:19] 2025-07-26 15:23:38,677 | INFO     | monitor loop #368: job 0:6745094817 is in state 'stageout'
[2025-07-26 11:24:19] 2025-07-26 15:23:38,678 | WARNING  | aborting job monitor tasks since payload process 1455184 is not running
[2025-07-26 11:24:19] 2025-07-26 15:23:38,683 | INFO     | adding to output.list: log.45743349._031334.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/4c/log.45743349._031334.job.log.tg
[2025-07-26 11:24:19] 2025-07-26 15:23:38,683 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 11:24:19] 2025-07-26 15:23:38,683 | INFO     | summary of transferred files:
[2025-07-26 11:24:19] 2025-07-26 15:23:38,683 | INFO     |  -- lfn=log.45743349._031334.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 11:24:19] 2025-07-26 15:23:38,684 | INFO     | stage-out finished correctly
[2025-07-26 11:24:19] 2025-07-26 15:23:39,583 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 11:24:19] 2025-07-26 15:23:39,648 | INFO     | job 6745094817 has state=finished
[2025-07-26 11:24:19] 2025-07-26 15:23:39,648 | INFO     | preparing for final server update for job 6745094817 in state='finished'
[2025-07-26 11:24:19] 2025-07-26 15:23:39,648 | INFO     | this job has now completed (state=finished)
[2025-07-26 11:24:19] 2025-07-26 15:23:39,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 11:24:19] 2025-07-26 15:23:39,649 | INFO     | log transfer has been attempted: DONE
[2025-07-26 11:24:19] 2025-07-26 15:23:39,649 | INFO     | job 6745094817 has finished - writing final server update
[2025-07-26 11:24:19] 2025-07-26 15:23:39,649 | INFO     | total number of processed events: 400 (read)
[2025-07-26 11:24:19] 2025-07-26 15:23:39,649 | INFO     | executing command: lscpu
[2025-07-26 11:24:19] 2025-07-26 15:23:39,706 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 11:24:19] 2025-07-26 15:23:41,180 | INFO     | monitor loop #369: job 0:6745094817 is in state 'finished'
[2025-07-26 11:24:19] 2025-07-26 15:23:41,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:24:19] 2025-07-26 15:23:43,684 | INFO     | monitor loop #370: job 0:6745094817 is in state 'finished'
[2025-07-26 11:24:19] 2025-07-26 15:23:43,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,429 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 11:24:19] 2025-07-26 15:23:45,449 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2993.726666666667
[2025-07-26 11:24:19] 2025-07-26 15:23:45,477 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745094817/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,478 | INFO     | extracted standard info from prmon json
[2025-07-26 11:24:19] 2025-07-26 15:23:45,478 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 11:24:19] 2025-07-26 15:23:45,478 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 11:24:19] 2025-07-26 15:23:45,479 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 11:24:19] 2025-07-26 15:23:45,479 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 11:24:19] 2025-07-26 15:23:45,481 | INFO     | fitting pss+swap vs Time
[2025-07-26 11:24:19] 2025-07-26 15:23:45,481 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,481 | INFO     | sum of deviations: -162043998.99999982
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | mean x: 1753540963.0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | mean y: 2292901.1818181816
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | -- intersect: 2009866722.1106787
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | intersect: 2009866722.1106787
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | chi2: 0.017703853136281887
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | -- intersect: 2009866722.1106787
[2025-07-26 11:24:19] 2025-07-26 15:23:45,482 | INFO     | current memory leak: -1.14 B/s (using 77 data points, chi2=0.02)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | could have reported an average CPU frequency of 2951 MHz (6 samples)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | ..............................
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . Timing measurements:
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . get job = 0 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . initial setup = 4 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . payload setup = 11 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . stage-in = 0 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . payload execution = 5081 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . stage-out = 0 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | . log creation = 0 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,483 | INFO     | ..............................
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | 
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | job summary report
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | --------------------------------------------------
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | PanDA job id: 6745094817
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | task id: 45743349
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | errors: (none)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | pilot state: finished 
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | transexitcode: 0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | exeerrorcode: 0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | exeerrordiag: 
[2025-07-26 11:24:19] 2025-07-26 15:23:45,568 | INFO     | exitcode: 0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | exitmsg: OK
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | cpuconsumptiontime: 37325 s
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | nevents: 400
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | neventsw: 0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | pid: 1455184
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | pgrp: 1455184
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | corecount: 8
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | event service: False
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | sizes: {0: 2397302, 1: 2397501, 8: 2397763, 11: 2397791, 5096: 2423982, 5098: 2432980, 5099: 2433164, 5105: 2433358}
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | --------------------------------------------------
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | 
[2025-07-26 11:24:19] 2025-07-26 15:23:45,569 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 11:24:19] 2025-07-26 15:23:45,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | job 6745094817 has completed (purged errors)
[2025-07-26 11:24:19] 2025-07-26 15:23:45,598 | INFO     | overall cleanup function is called
[2025-07-26 11:24:19] 2025-07-26 15:23:46,607 | INFO     | --- collectZombieJob: --- 10, [1455184]
[2025-07-26 11:24:19] 2025-07-26 15:23:46,608 | INFO     | zombie collector waiting for pid 1455184
[2025-07-26 11:24:19] 2025-07-26 15:23:46,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 11:24:19] 2025-07-26 15:23:46,608 | INFO     | collected zombie processes
[2025-07-26 11:24:19] 2025-07-26 15:23:46,608 | INFO     | will attempt to kill all subprocesses of pid=1455184
[2025-07-26 11:24:19] 2025-07-26 15:23:47,068 | INFO     | process IDs to be killed: [1455184] (in reverse order)
[2025-07-26 11:24:19] 2025-07-26 15:23:47,239 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 11:24:19] 2025-07-26 15:23:47,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 11:24:19] 2025-07-26 15:23:47,262 | INFO     | did not find any defunct processes belonging to 1455184
[2025-07-26 11:24:19] 2025-07-26 15:23:47,283 | INFO     | did not find any defunct processes belonging to 1455184
[2025-07-26 11:24:19] 2025-07-26 15:23:47,283 | INFO     | ready for new job
[2025-07-26 11:24:19] 2025-07-26 15:23:47,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 11:24:19] 2025-07-26 15:23:47,284 | INFO     | ***************************************
[2025-07-26 11:24:19] 2025-07-26 15:23:47,285 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 11:24:19] 2025-07-26 15:23:47,285 | INFO     | ***************************************
[2025-07-26 11:24:19] 2025-07-26 15:23:47,285 | INFO     | 
[2025-07-26 11:24:19] 2025-07-26 15:23:47,303 | INFO     | architecture information:
[2025-07-26 11:24:19] 2025-07-26 15:23:47,304 | INFO     | executing command: cat /etc/os-release
[2025-07-26 11:24:19] 2025-07-26 15:23:47,325 | INFO     | cat /etc/os-release:
[2025-07-26 11:24:19] NAME="CentOS Linux"
[2025-07-26 11:24:19] VERSION="7 (Core)"
[2025-07-26 11:24:19] ID="centos"
[2025-07-26 11:24:19] ID_LIKE="rhel fedora"
[2025-07-26 11:24:19] VERSION_ID="7"
[2025-07-26 11:24:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 11:24:19] ANSI_COLOR="0;31"
[2025-07-26 11:24:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 11:24:19] HOME_URL="https://www.centos.org/"
[2025-07-26 11:24:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 11:24:19] 
[2025-07-26 11:24:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 11:24:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 11:24:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 11:24:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 11:24:19] 
[2025-07-26 11:24:19] 2025-07-26 15:23:47,325 | INFO     | ***************************************
[2025-07-26 11:24:19] 2025-07-26 15:23:47,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 11:24:19] 2025-07-26 15:23:47,844 | INFO     | sufficient remaining disk space (129158348800 B)
[2025-07-26 11:24:19] 2025-07-26 15:23:47,845 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 11:24:19] 2025-07-26 15:23:47,845 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 11:24:19] 2025-07-26 15:23:47,845 | INFO     | update_server=False
[2025-07-26 11:24:19] 2025-07-26 15:23:47,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 11:24:19] 2025-07-26 15:23:47,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:24:19] 2025-07-26 15:23:47,845 | INFO     | aborting loop
[2025-07-26 11:24:19] 2025-07-26 15:23:48,156 | INFO     | all data control threads have been joined
[2025-07-26 11:24:19] 2025-07-26 15:23:48,225 | INFO     | all job control threads have been joined
[2025-07-26 11:24:19] 2025-07-26 15:23:48,350 | INFO     | all payload control threads have been joined
[2025-07-26 11:24:19] 2025-07-26 15:23:48,850 | INFO     | [job] job monitor thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:48,851 | INFO     | [job] retrieve thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:48,956 | INFO     | [job] validate thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,153 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,159 | INFO     | [data] control thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,211 | INFO     | [payload] failed_post thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,231 | INFO     | [job] control thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 11:24:19] 2025-07-26 15:23:49,354 | INFO     | [payload] control thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,482 | INFO     | [payload] validate_post thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:49,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:50,124 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:50,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 11:24:19] 2025-07-26 15:23:50,158 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:50,263 | INFO     | [data] copytool_in thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:50,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:24:19] 2025-07-26 15:23:51,262 | INFO     | [data] copytool_out thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:51,583 | INFO     | [job] queue monitor thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:54,161 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 11:24:19] 2025-07-26 15:23:54,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466096641856)>', '<ExcThread(monitor, started 140465605166848)>']
[2025-07-26 11:24:19] 2025-07-26 15:23:59,828 | INFO     | all workflow threads have been joined
[2025-07-26 11:24:19] 2025-07-26 15:23:59,828 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 11:24:19] 2025-07-26 15:23:59,828 | INFO     | traces error code: 0
[2025-07-26 11:24:19] 2025-07-26 15:23:59,828 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 11:24:19] 2025-07-26 15:24:19,011 | INFO     | PID=1440484 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 11:24:19] 2025-07-26 15:24:19,012 | INFO     | .. there are 19 such processes running
[2025-07-26 11:24:19] 2025-07-26 15:24:19,012 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 11:24:19] 2025-07-26 15:24:19,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 11:24:19] 2025-07-26 15:24:19,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 11:24:19] 2025-07-26 15:24:19,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 11:24:19] 2025-07-26 15:24:19,012 | INFO     | [monitor] control thread has ended
[2025-07-26 11:24:19] 2025-07-26 15:24:19,149 [wrapper] ==== pilot stdout END ====
[2025-07-26 11:24:19] 2025-07-26 15:24:19,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 11:24:19] 2025-07-26 15:24:19,156 [wrapper] pilotpid: 1440484
[2025-07-26 11:24:19] 2025-07-26 15:24:19,160 [wrapper] Pilot exit status: 0
[2025-07-26 11:24:19] 2025-07-26 15:24:19,177 [wrapper] pandaids: 6745094817
[2025-07-26 11:24:19] 2025-07-26 15:24:19,300 [wrapper] cleanup supervisor_pilot 2159802 1440485
[2025-07-26 11:24:19] 2025-07-26 15:24:19,306 [wrapper] Test setup, not cleaning
[2025-07-26 11:24:19] 2025-07-26 15:24:19,311 [wrapper] apfmon messages muted
[2025-07-26 11:24:19] 2025-07-26 15:24:19,316 [wrapper] ==== wrapper stdout END ====
[2025-07-26 11:24:19] 2025-07-26 15:24:19,320 [wrapper] ==== wrapper stderr END ====
[2025-07-26 11:24:19]  *** Error codes and diagnostics ***
[2025-07-26 11:24:19]     "exeErrorCode": 0,
[2025-07-26 11:24:19]     "exeErrorDiag": "",
[2025-07-26 11:24:19]     "pilotErrorCode": 0,
[2025-07-26 11:24:19]     "pilotErrorDiag": "",
[2025-07-26 11:24:19]  *** Listing of results directory ***
[2025-07-26 11:24:19] total 341600
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 23:10 pilot3.tar.gz
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 23:15 queuedata.json
[2025-07-26 11:24:19] -rwx------. 1 boincer umatlas     36292 Jul 25 23:15 runpilot2-wrapper.sh
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas       100 Jul 26 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 11:24:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 09:58 run_atlas
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas       105 Jul 26 09:58 job.xml
[2025-07-26 11:24:19] -rw-r--r--. 2 boincer umatlas 141877337 Jul 26 09:58 EVNT.45743347._001753.pool.root.1
[2025-07-26 11:24:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 09:58 start_atlas.sh
[2025-07-26 11:24:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 09:58 shared
[2025-07-26 11:24:19] -rw-r--r--. 2 boincer umatlas    542888 Jul 26 09:58 input.tar.gz
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas         0 Jul 26 09:58 boinc_lockfile
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 09:58 pandaJob.out
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas    980133 Jul 26 09:58 agis_schedconf.cvmfs.json
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas   1593052 Jul 26 09:58 agis_ddmendpoints.agis.ALL.json
[2025-07-26 11:24:19] drwx------. 4 boincer umatlas      4096 Jul 26 09:58 pilot3
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas      6935 Jul 26 11:21 init_data.xml
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas 202457904 Jul 26 11:23 HITS.45743349._031334.pool.root.1
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas       530 Jul 26 11:23 boinc_task_state.xml
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas        95 Jul 26 11:23 pilot_heartbeat.json
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas      1045 Jul 26 11:23 memory_monitor_summary.json
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas    295021 Jul 26 11:23 log.45743349._031334.job.log.tgz.1
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas      7768 Jul 26 11:23 heartbeat.json
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 11:24 boinc_mmap_file
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas        27 Jul 26 11:24 wrapper_checkpoint.txt
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas       823 Jul 26 11:24 pilotlog.txt
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas    495790 Jul 26 11:24 log.45743349._031334.job.log.1
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas       357 Jul 26 11:24 output.list
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas       620 Jul 26 11:24 runtime_log
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas    808960 Jul 26 11:24 result.tar.gz
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas       652 Jul 26 11:24 x2RKDmuYkz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY3zKDmiPoeCn.diag
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 11:24 runtime_log.err
[2025-07-26 11:24:19] -rw-r--r--. 1 boincer umatlas     21610 Jul 26 11:24 stderr.txt
[2025-07-26 11:24:19] HITS file was successfully produced:
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas 202457904 Jul 26 11:23 shared/HITS.pool.root.1
[2025-07-26 11:24:19]  *** Contents of shared directory: ***
[2025-07-26 11:24:19] total 337616
[2025-07-26 11:24:19] -rw-r--r--. 2 boincer umatlas 141877337 Jul 26 09:58 ATLAS.root_0
[2025-07-26 11:24:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 09:58 start_atlas.sh
[2025-07-26 11:24:19] -rw-r--r--. 2 boincer umatlas    542888 Jul 26 09:58 input.tar.gz
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas 202457904 Jul 26 11:23 HITS.pool.root.1
[2025-07-26 11:24:19] -rw-------. 1 boincer umatlas    808960 Jul 26 11:24 result.tar.gz
11:24:20 (1436188): run_atlas exited; CPU time 37528.529813
11:24:20 (1436188): called boinc_finish(0)

</stderr_txt>
]]>

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