Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:58 (3392511): wrapper (7.7.26015): starting
09:20:58 (3392511): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 09:20:58] Arguments: --nthreads 8
[2025-07-26 09:20:58] Threads: 8
[2025-07-26 09:20:58] Checking for CVMFS
[2025-07-26 09:20:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:20:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:21:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:21:00] 2.12.6.0 83837 25880 292208 148778 3 34 26600019 32935936 30639 16776704 1 221592941 99.540 284249953 20515 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 09:21:00] CVMFS is ok
[2025-07-26 09:21:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:21:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:21:00] Further information can be found at the LHC@home message board.
[2025-07-26 09:21:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:21:00] Checking for apptainer binary...
[2025-07-26 09:21:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:21:00] Running /usr/bin/apptainer --version
[2025-07-26 09:21:00] apptainer version 1.4.1-1.el9
[2025-07-26 09:21:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:21:00] c7-2-10.aglt2.org
[2025-07-26 09:21:00] apptainer works
[2025-07-26 09:21:00] Set ATHENA_PROC_NUMBER=8
[2025-07-26 09:21:00] Set ATHENA_CORE_NUMBER=8
[2025-07-26 09:21:01] Starting ATLAS job with PandaID=6745096282
[2025-07-26 09:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:50:24]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:50:24] 2025-07-26 15:37:55,032 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3211.143645833334
[2025-07-26 12:50:24] 2025-07-26 15:37:55,367 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745096282/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:50:24] 2025-07-26 15:37:55,368 | INFO     | extracted standard info from prmon json
[2025-07-26 12:50:24] 2025-07-26 15:37:55,368 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:50:24] 2025-07-26 15:37:55,368 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:50:24] 2025-07-26 15:37:55,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:50:24] 2025-07-26 15:37:55,410 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:50:24] 2025-07-26 15:37:55,412 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:50:24] 2025-07-26 15:37:55,412 | INFO     | sum of square deviations: 713128858.9697001
[2025-07-26 12:50:24] 2025-07-26 15:37:55,413 | INFO     | sum of deviations: 29694663975.151527
[2025-07-26 12:50:24] 2025-07-26 15:37:55,545 | INFO     | mean x: 1753540240.5151515
[2025-07-26 12:50:24] 2025-07-26 15:37:55,546 | INFO     | mean y: 2109722.1742424243
[2025-07-26 12:50:24] 2025-07-26 15:37:55,546 | INFO     | -- intersect: -73015252503.54411
[2025-07-26 12:50:24] 2025-07-26 15:37:55,546 | INFO     | intersect: -73015252503.54411
[2025-07-26 12:50:24] 2025-07-26 15:37:55,546 | INFO     | chi2: 3.4191484953528466
[2025-07-26 12:50:24] 2025-07-26 15:37:55,546 | INFO     | sum of square deviations: 635118703.9685051
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | sum of deviations: 35257275150.96851
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | mean x: 1753540088.015748
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | mean y: 2120164.0157480314
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | -- intersect: -97341958958.69673
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | intersect: -97341958958.69673
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | chi2: 2.761960975253303
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | current chi2=2.761960975253303 (change=19.22079491407768 %)
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | right removable region: 126
[2025-07-26 12:50:24] 2025-07-26 15:37:55,547 | INFO     | sum of square deviations: 635117483.9685051
[2025-07-26 12:50:24] 2025-07-26 15:37:55,548 | INFO     | sum of deviations: 1446557122.0236206
[2025-07-26 12:50:24] 2025-07-26 15:37:55,548 | INFO     | mean x: 1753540393.015748
[2025-07-26 12:50:24] 2025-07-26 15:37:55,548 | INFO     | mean y: 2164573.4881889764
[2025-07-26 12:50:24] 2025-07-26 15:37:55,548 | INFO     | -- intersect: -3991736410.662354
[2025-07-26 12:50:24] 2025-07-26 15:37:55,548 | INFO     | intersect: -3991736410.662354
[2025-07-26 12:50:24] 2025-07-26 15:37:55,548 | INFO     | chi2: 0.8630852447046327
[2025-07-26 12:50:24] 2025-07-26 15:37:55,549 | INFO     | current chi2=0.8630852447046327 (change=74.7573044611049 %)
[2025-07-26 12:50:24] 2025-07-26 15:37:55,549 | INFO     | sum of square deviations: 563013196.4672145
[2025-07-26 12:50:24] 2025-07-26 15:37:55,772 | INFO     | sum of deviations: -4176715713.090164
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | mean x: 1753540545.5163934
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | mean y: 2176287.795081967
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | -- intersect: 13010824035.22939
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | intersect: 13010824035.22939
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | chi2: 0.7304798795625362
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | current chi2=0.7304798795625362 (change=15.364109855391744 %)
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | left removable region: 20
[2025-07-26 12:50:24] 2025-07-26 15:37:55,773 | INFO     | sum of square deviations: 369281342.5
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | sum of deviations: 382774664.49999994
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | mean x: 1753540667.5
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | mean y: 2194614.952830189
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | -- intersect: -1815419392.1491358
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | intersect: -1815419392.1491358
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | chi2: 0.028638152034718346
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | -- intersect: -1815419392.1491358
[2025-07-26 12:50:24] 2025-07-26 15:37:55,774 | INFO     | current memory leak: 1.04 B/s (using 106 data points, chi2=0.03)
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | could have reported an average CPU frequency of 3264 MHz (8 samples)
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | ..............................
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . Timing measurements:
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . get job = 0 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . initial setup = 6 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . payload setup = 49 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . stage-in = 0 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . payload execution = 8030 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . stage-out = 3 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,775 | INFO     | . log creation = 0 s
[2025-07-26 12:50:24] 2025-07-26 15:37:55,776 | INFO     | ..............................
[2025-07-26 12:50:24] 2025-07-26 15:37:57,415 | INFO     | 
[2025-07-26 12:50:24] 2025-07-26 15:37:57,415 | INFO     | job summary report
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | --------------------------------------------------
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | PanDA job id: 6745096282
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | task id: 45743349
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | errors: (none)
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | pilot state: finished 
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | transexitcode: 0
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | exeerrorcode: 0
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | exeerrordiag: 
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | exitcode: 0
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | exitmsg: OK
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | cpuconsumptiontime: 35782 s
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | nevents: 400
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | neventsw: 0
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | pid: 3433042
[2025-07-26 12:50:24] 2025-07-26 15:37:57,416 | INFO     | pgrp: 3433042
[2025-07-26 12:50:24] 2025-07-26 15:37:57,417 | INFO     | corecount: 8
[2025-07-26 12:50:24] 2025-07-26 15:37:57,417 | INFO     | event service: False
[2025-07-26 12:50:24] 2025-07-26 15:37:57,417 | INFO     | sizes: {0: 2397246, 1: 2397330, 2: 2397529, 13: 2397529, 23: 2397847, 24: 2397875, 8084: 2425310, 8087: 2434308, 8090: 2434364, 8104: 2434586}
[2025-07-26 12:50:24] 2025-07-26 15:37:57,417 | INFO     | --------------------------------------------------
[2025-07-26 12:50:24] 2025-07-26 15:37:57,417 | INFO     | 
[2025-07-26 12:50:24] 2025-07-26 15:37:57,417 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:50:24] 2025-07-26 15:37:57,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,662 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:50:24] 2025-07-26 15:37:57,662 | INFO     | job 6745096282 has completed (purged errors)
[2025-07-26 12:50:24] 2025-07-26 15:37:57,662 | INFO     | overall cleanup function is called
[2025-07-26 12:50:24] 2025-07-26 15:37:58,797 | INFO     | --- collectZombieJob: --- 10, [3433042]
[2025-07-26 12:50:24] 2025-07-26 15:37:58,798 | INFO     | zombie collector waiting for pid 3433042
[2025-07-26 12:50:24] 2025-07-26 15:37:58,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:50:24] 2025-07-26 15:37:58,798 | INFO     | collected zombie processes
[2025-07-26 12:50:24] 2025-07-26 15:37:58,798 | INFO     | will attempt to kill all subprocesses of pid=3433042
[2025-07-26 12:50:24] 2025-07-26 15:38:04,988 | INFO     | number of running child processes to parent process 3433042: 1
[2025-07-26 12:50:24] 2025-07-26 15:38:04,989 | INFO     | maximum number of monitored processes: 6
[2025-07-26 12:50:24] 2025-07-26 15:38:04,989 | INFO     | aborting job monitoring since job object (job id=6745096282) has expired
[2025-07-26 12:50:24] 2025-07-26 15:38:08,839 | INFO     | PID=3404674 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 12:50:24] 2025-07-26 15:38:08,839 | INFO     | .. there are 62 such processes running
[2025-07-26 12:50:24] 2025-07-26 15:38:09,545 | INFO     | process IDs to be killed: [3433042] (in reverse order)
[2025-07-26 12:50:24] 2025-07-26 15:38:10,850 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:50:24] 2025-07-26 15:38:10,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:50:24] 2025-07-26 15:38:10,973 | INFO     | did not find any defunct processes belonging to 3433042
[2025-07-26 12:50:24] 2025-07-26 15:38:11,094 | INFO     | did not find any defunct processes belonging to 3433042
[2025-07-26 12:50:24] 2025-07-26 15:38:11,094 | INFO     | ready for new job
[2025-07-26 12:50:24] 2025-07-26 15:38:11,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:50:24] 2025-07-26 15:38:11,096 | INFO     | ***************************************
[2025-07-26 12:50:24] 2025-07-26 15:38:11,096 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:50:24] 2025-07-26 15:38:11,096 | INFO     | ***************************************
[2025-07-26 12:50:24] 2025-07-26 15:38:11,096 | INFO     | 
[2025-07-26 12:50:24] 2025-07-26 15:38:11,117 | INFO     | architecture information:
[2025-07-26 12:50:24] 2025-07-26 15:38:11,125 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:50:24] 2025-07-26 15:38:11,227 | INFO     | cat /etc/os-release:
[2025-07-26 12:50:24] NAME="CentOS Linux"
[2025-07-26 12:50:24] VERSION="7 (Core)"
[2025-07-26 12:50:24] ID="centos"
[2025-07-26 12:50:24] ID_LIKE="rhel fedora"
[2025-07-26 12:50:24] VERSION_ID="7"
[2025-07-26 12:50:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:50:24] ANSI_COLOR="0;31"
[2025-07-26 12:50:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:50:24] HOME_URL="https://www.centos.org/"
[2025-07-26 12:50:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:50:24] 
[2025-07-26 12:50:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:50:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:50:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:50:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:50:24] 
[2025-07-26 12:50:24] 2025-07-26 15:38:11,228 | INFO     | ***************************************
[2025-07-26 12:50:24] 2025-07-26 15:38:11,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-26 12:50:24] 2025-07-26 15:38:11,868 | INFO     | sufficient remaining disk space (73001861120 B)
[2025-07-26 12:50:24] 2025-07-26 15:38:11,868 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:50:24] 2025-07-26 15:38:11,868 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:50:24] 2025-07-26 15:38:11,868 | INFO     | update_server=False
[2025-07-26 12:50:24] 2025-07-26 15:38:11,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:50:24] 2025-07-26 15:38:11,869 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:50:24] 2025-07-26 15:38:11,869 | INFO     | aborting loop
[2025-07-26 12:50:24] 2025-07-26 15:38:11,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:50:24] 2025-07-26 15:38:12,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:50:24] 2025-07-26 15:38:12,467 | INFO     | all payload control threads have been joined
[2025-07-26 12:50:24] 2025-07-26 15:38:12,763 | INFO     | all data control threads have been joined
[2025-07-26 12:50:24] 2025-07-26 15:38:12,875 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:12,876 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:12,980 | INFO     | all job control threads have been joined
[2025-07-26 12:50:24] 2025-07-26 15:38:13,044 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,045 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,244 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,301 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,416 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,475 | INFO     | [payload] control thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,570 | INFO     | [job] validate thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,769 | INFO     | [data] control thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,900 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:13,986 | INFO     | [job] control thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:14,075 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:14,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:50:24] 2025-07-26 15:38:15,807 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:16,059 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:50:24] 2025-07-26 15:38:16,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858728838976)>', '<ExcThread(monitor, started 139857993119488)>']
[2025-07-26 12:50:24] 2025-07-26 15:38:21,165 | INFO     | all workflow threads have been joined
[2025-07-26 12:50:24] 2025-07-26 15:38:21,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:50:24] 2025-07-26 15:38:21,166 | INFO     | traces error code: 0
[2025-07-26 12:50:24] 2025-07-26 15:38:21,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:50:24] 2025-07-26 15:38:49,503 | INFO     | PID=3404674 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:50:24] 2025-07-26 15:38:49,504 | INFO     | .. there are 61 such processes running
[2025-07-26 12:50:24] 2025-07-26 15:38:49,505 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:50:24] 2025-07-26 15:38:49,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:50:24] 2025-07-26 15:38:49,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:50:24] 2025-07-26 15:38:49,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:50:24] 2025-07-26 15:38:49,506 | INFO     | [monitor] control thread has ended
[2025-07-26 12:50:24] 2025-07-26 15:38:50,143 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:50:24] 2025-07-26 15:38:50,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:50:24] 2025-07-26 15:38:50,152 [wrapper] pilotpid: 3404674
[2025-07-26 12:50:24] 2025-07-26 15:38:50,154 [wrapper] Pilot exit status: 0
[2025-07-26 12:50:24] 2025-07-26 15:38:50,174 [wrapper] pandaids: 6745096282
[2025-07-26 12:50:24] 2025-07-26 15:38:50,359 [wrapper] cleanup supervisor_pilot  788473 3404675
[2025-07-26 12:50:24] 2025-07-26 15:38:50,368 [wrapper] Test setup, not cleaning
[2025-07-26 12:50:24] 2025-07-26 15:38:50,370 [wrapper] apfmon messages muted
[2025-07-26 12:50:24] 2025-07-26 15:38:50,372 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:50:24] 2025-07-26 15:38:50,375 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:50:24]  *** Error codes and diagnostics ***
[2025-07-26 12:50:24]     "exeErrorCode": 0,
[2025-07-26 12:50:24]     "exeErrorDiag": "",
[2025-07-26 12:50:24]     "pilotErrorCode": 0,
[2025-07-26 12:50:24]     "pilotErrorDiag": "",
[2025-07-26 12:50:24]  *** Listing of results directory ***
[2025-07-26 12:50:24] total 356192
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 00:47 queuedata.json
[2025-07-26 12:50:24] -rwx------. 1 boincer umatlas     36292 Jul 26 00:48 runpilot2-wrapper.sh
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 00:48 pilot3.tar.gz
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas       100 Jul 26 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:50:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 09:20 run_atlas
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas       105 Jul 26 09:20 job.xml
[2025-07-26 12:50:24] -rw-r--r--. 2 boincer umatlas 149651390 Jul 26 09:20 EVNT.45743347._001817.pool.root.1
[2025-07-26 12:50:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 09:20 start_atlas.sh
[2025-07-26 12:50:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 09:20 shared
[2025-07-26 12:50:24] -rw-r--r--. 2 boincer umatlas    542887 Jul 26 09:20 input.tar.gz
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas         0 Jul 26 09:20 boinc_lockfile
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 09:21 pandaJob.out
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas    980133 Jul 26 09:21 agis_schedconf.cvmfs.json
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas   1593052 Jul 26 09:21 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:50:24] drwx------. 4 boincer umatlas      4096 Jul 26 09:21 pilot3
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas 209435671 Jul 26 11:37 HITS.45743349._032309.pool.root.1
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas       528 Jul 26 11:37 boinc_task_state.xml
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas      1030 Jul 26 11:37 memory_monitor_summary.json
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas    316317 Jul 26 11:37 log.45743349._032309.job.log.tgz.1
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas      7770 Jul 26 11:37 heartbeat.json
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas        95 Jul 26 11:38 pilot_heartbeat.json
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas       823 Jul 26 11:38 pilotlog.txt
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas    576448 Jul 26 11:38 log.45743349._032309.job.log.1
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas       357 Jul 26 11:38 output.list
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas       620 Jul 26 11:38 runtime_log
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas    911360 Jul 26 11:38 result.tar.gz
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 11:38 runtime_log.err
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas       652 Jul 26 11:38 rMAMDmq0lz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjHRLDmdCPeon.diag
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas      6930 Jul 26 12:46 init_data.xml
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas        26 Jul 26 12:50 wrapper_checkpoint.txt
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:50 boinc_mmap_file
[2025-07-26 12:50:24] -rw-r--r--. 1 boincer umatlas     14638 Jul 26 12:50 stderr.txt
[2025-07-26 12:50:24] HITS file was successfully produced:
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas 209435671 Jul 26 11:37 shared/HITS.pool.root.1
[2025-07-26 12:50:24]  *** Contents of shared directory: ***
[2025-07-26 12:50:24] total 352120
[2025-07-26 12:50:24] -rw-r--r--. 2 boincer umatlas 149651390 Jul 26 09:20 ATLAS.root_0
[2025-07-26 12:50:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 09:20 start_atlas.sh
[2025-07-26 12:50:24] -rw-r--r--. 2 boincer umatlas    542887 Jul 26 09:20 input.tar.gz
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas 209435671 Jul 26 11:37 HITS.pool.root.1
[2025-07-26 12:50:24] -rw-------. 1 boincer umatlas    911360 Jul 26 11:38 result.tar.gz
12:50:26 (3392511): run_atlas exited; CPU time 35921.282904
12:50:26 (3392511): called boinc_finish(0)

</stderr_txt>
]]>

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