Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:28:19 (3523068): wrapper (7.7.26015): starting
01:28:19 (3523068): wrapper: running run_atlas (--nthreads 3)
[2025-07-27 01:28:19] Arguments: --nthreads 3
[2025-07-27 01:28:19] Threads: 3
[2025-07-27 01:28:19] Checking for CVMFS
[2025-07-27 01:28:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 01:28:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 01:28:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 01:28:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 01:28:19] 2.9.2.0 1693042 7196 84112 148793 0 57 11484815 36864000 0 130560 0 4830378 99.988 268077 2644 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-27 01:28:19] CVMFS is ok
[2025-07-27 01:28:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 01:28:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 01:28:19] Further information can be found at the LHC@home message board.
[2025-07-27 01:28:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 01:28:19] Checking for apptainer binary...
[2025-07-27 01:28:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 01:28:19] Running /usr/bin/apptainer --version
[2025-07-27 01:28:19] apptainer version 1.4.1-1.1
[2025-07-27 01:28:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 01:28:19] magicA250a
[2025-07-27 01:28:19] apptainer works
[2025-07-27 01:28:19] Set ATHENA_PROC_NUMBER=3
[2025-07-27 01:28:19] Set ATHENA_CORE_NUMBER=3
[2025-07-27 01:28:19] Starting ATLAS job with PandaID=6745099316
[2025-07-27 01:28:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 03:00:03]  *** The last 200 lines of the pilot log: ***
[2025-07-27 03:00:03]  filetype=log
[2025-07-27 03:00:03]  guid=85d7abb4-2e6e-4490-b416-2a7a737390e4
[2025-07-27 03:00:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-27 03:00:03]  is_altstaged=None
[2025-07-27 03:00:03]  is_tar=False
[2025-07-27 03:00:03]  lfn=log.45743349._034135.job.log.tgz.1
[2025-07-27 03:00:03]  mtime=0
[2025-07-27 03:00:03]  protocol_id=None
[2025-07-27 03:00:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 03:00:03]  replicas=None
[2025-07-27 03:00:03]  scope=mc23_13p6TeV
[2025-07-27 03:00:03]  status=None
[2025-07-27 03:00:03]  status_code=0
[2025-07-27 03:00:03]  storage_token=
[2025-07-27 03:00:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745099316/log.45743349._034135.job.log.tgz.1
[2025-07-27 03:00:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/aa/log.45743349._034135.job.log.tgz.1
[2025-07-27 03:00:03]  workdir=None
[2025-07-27 03:00:03] ]
[2025-07-27 03:00:03] 2025-07-27 00:59:29,500 | INFO     | transferring file log.45743349._034135.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745099316/log.45743349._034135.job.log.tgz.1 to /local/data/boinc/
[2025-07-27 03:00:03] 2025-07-27 00:59:29,501 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745099316/log.45743349._034135.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0341
[2025-07-27 03:00:03] 2025-07-27 00:59:29,512 | INFO     | adding to output.list: log.45743349._034135.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/aa/log.45743349._034135.job.log.tg
[2025-07-27 03:00:03] 2025-07-27 00:59:29,513 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 03:00:03] 2025-07-27 00:59:29,513 | INFO     | summary of transferred files:
[2025-07-27 03:00:03] 2025-07-27 00:59:29,513 | INFO     |  -- lfn=log.45743349._034135.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 03:00:03] 2025-07-27 00:59:29,513 | INFO     | stage-out finished correctly
[2025-07-27 03:00:03] 2025-07-27 00:59:29,543 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 03:00:03] 2025-07-27 00:59:29,821 | INFO     | job 6745099316 has state=finished
[2025-07-27 03:00:03] 2025-07-27 00:59:29,821 | INFO     | preparing for final server update for job 6745099316 in state='finished'
[2025-07-27 03:00:03] 2025-07-27 00:59:29,822 | INFO     | this job has now completed (state=finished)
[2025-07-27 03:00:03] 2025-07-27 00:59:29,822 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 03:00:03] 2025-07-27 00:59:29,822 | INFO     | log transfer has been attempted: DONE
[2025-07-27 03:00:03] 2025-07-27 00:59:29,822 | INFO     | job 6745099316 has finished - writing final server update
[2025-07-27 03:00:03] 2025-07-27 00:59:29,822 | INFO     | total number of processed events: 400 (read)
[2025-07-27 03:00:03] 2025-07-27 00:59:29,822 | INFO     | executing command: lscpu
[2025-07-27 03:00:03] 2025-07-27 00:59:29,836 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 03:00:03] 2025-07-27 00:59:30,638 | INFO     | monitor loop #422: job 0:6745099316 is in state 'finished'
[2025-07-27 03:00:03] 2025-07-27 00:59:30,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 03:00:03] 2025-07-27 00:59:31,966 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 03:00:03] 2025-07-27 00:59:31,967 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3772.5670000000005
[2025-07-27 03:00:03] 2025-07-27 00:59:31,968 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745099316/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 03:00:03] 2025-07-27 00:59:31,968 | INFO     | extracted standard info from prmon json
[2025-07-27 03:00:03] 2025-07-27 00:59:31,968 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 03:00:03] 2025-07-27 00:59:31,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 03:00:03] 2025-07-27 00:59:31,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 03:00:03] 2025-07-27 00:59:31,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 03:00:03] 2025-07-27 00:59:31,969 | INFO     | fitting pss+swap vs Time
[2025-07-27 03:00:03] 2025-07-27 00:59:31,969 | INFO     | sum of square deviations: 177275882.0
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | sum of deviations: -12404817931.000002
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | mean x: 1753575330.0
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | mean y: 2469013.108433735
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | -- intersect: 122708290310.01358
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | intersect: 122708290310.01358
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | chi2: 0.0643807142462949
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | -- intersect: 122708290310.01358
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | current memory leak: -69.97 B/s (using 83 data points, chi2=0.06)
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | could have reported an average CPU frequency of 3802 MHz (7 samples)
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | ..............................
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . Timing measurements:
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . get job = 0 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . initial setup = 1 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . payload setup = 3 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . stage-in = 0 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . payload execution = 5444 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . stage-out = 0 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | . log creation = 0 s
[2025-07-27 03:00:03] 2025-07-27 00:59:31,970 | INFO     | ..............................
[2025-07-27 03:00:03] 2025-07-27 00:59:32,000 | INFO     | 
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | job summary report
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | --------------------------------------------------
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | PanDA job id: 6745099316
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | task id: 45743349
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | errors: (none)
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | pilot state: finished 
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | transexitcode: 0
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | exeerrorcode: 0
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | exeerrordiag: 
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | exitcode: 0
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | exitmsg: OK
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | cpuconsumptiontime: 15730 s
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | nevents: 400
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | neventsw: 0
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | pid: 3533193
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | pgrp: 3533193
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | corecount: 3
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | event service: False
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | sizes: {0: 2397427, 2: 2397689, 11: 2397717, 5450: 2424478, 5451: 2433538, 5454: 2433676}
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | --------------------------------------------------
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | 
[2025-07-27 03:00:03] 2025-07-27 00:59:32,001 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | job 6745099316 has completed (purged errors)
[2025-07-27 03:00:03] 2025-07-27 00:59:32,013 | INFO     | overall cleanup function is called
[2025-07-27 03:00:03] 2025-07-27 00:59:33,019 | INFO     | --- collectZombieJob: --- 10, [3533193]
[2025-07-27 03:00:03] 2025-07-27 00:59:33,019 | INFO     | zombie collector waiting for pid 3533193
[2025-07-27 03:00:03] 2025-07-27 00:59:33,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 03:00:03] 2025-07-27 00:59:33,020 | INFO     | collected zombie processes
[2025-07-27 03:00:03] 2025-07-27 00:59:33,020 | INFO     | will attempt to kill all subprocesses of pid=3533193
[2025-07-27 03:00:03] 2025-07-27 00:59:33,060 | INFO     | process IDs to be killed: [3533193] (in reverse order)
[2025-07-27 03:00:03] 2025-07-27 00:59:33,083 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 03:00:03] 2025-07-27 00:59:33,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 03:00:03] 2025-07-27 00:59:33,084 | INFO     | did not find any defunct processes belonging to 3533193
[2025-07-27 03:00:03] 2025-07-27 00:59:33,085 | INFO     | did not find any defunct processes belonging to 3533193
[2025-07-27 03:00:03] 2025-07-27 00:59:33,085 | INFO     | ready for new job
[2025-07-27 03:00:03] 2025-07-27 00:59:33,085 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 03:00:03] 2025-07-27 00:59:33,086 | INFO     | ***************************************
[2025-07-27 03:00:03] 2025-07-27 00:59:33,086 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 03:00:03] 2025-07-27 00:59:33,086 | INFO     | ***************************************
[2025-07-27 03:00:03] 2025-07-27 00:59:33,086 | INFO     | 
[2025-07-27 03:00:03] 2025-07-27 00:59:33,086 | INFO     | architecture information:
[2025-07-27 03:00:03] 2025-07-27 00:59:33,086 | INFO     | executing command: cat /etc/os-release
[2025-07-27 03:00:03] 2025-07-27 00:59:33,094 | INFO     | cat /etc/os-release:
[2025-07-27 03:00:03] NAME="CentOS Linux"
[2025-07-27 03:00:03] VERSION="7 (Core)"
[2025-07-27 03:00:03] ID="centos"
[2025-07-27 03:00:03] ID_LIKE="rhel fedora"
[2025-07-27 03:00:03] VERSION_ID="7"
[2025-07-27 03:00:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 03:00:03] ANSI_COLOR="0;31"
[2025-07-27 03:00:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 03:00:03] HOME_URL="https://www.centos.org/"
[2025-07-27 03:00:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 03:00:03] 
[2025-07-27 03:00:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 03:00:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 03:00:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 03:00:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 03:00:03] 
[2025-07-27 03:00:03] 2025-07-27 00:59:33,094 | INFO     | ***************************************
[2025-07-27 03:00:03] 2025-07-27 00:59:33,597 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-27 03:00:03] 2025-07-27 00:59:33,608 | INFO     | sufficient remaining disk space (349324705792 B)
[2025-07-27 03:00:03] 2025-07-27 00:59:33,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 03:00:03] 2025-07-27 00:59:33,609 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 03:00:03] 2025-07-27 00:59:33,609 | INFO     | update_server=False
[2025-07-27 03:00:03] 2025-07-27 00:59:33,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 03:00:03] 2025-07-27 00:59:33,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:00:03] 2025-07-27 00:59:34,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 03:00:03] 2025-07-27 00:59:34,148 | INFO     | aborting loop
[2025-07-27 03:00:03] 2025-07-27 00:59:34,197 | INFO     | all payload control threads have been joined
[2025-07-27 03:00:03] 2025-07-27 00:59:34,212 | INFO     | all data control threads have been joined
[2025-07-27 03:00:03] 2025-07-27 00:59:34,213 | INFO     | all job control threads have been joined
[2025-07-27 03:00:03] 2025-07-27 00:59:34,614 | INFO     | [job] retrieve thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:34,615 | INFO     | [job] queue monitor thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:34,828 | INFO     | [data] copytool_in thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 03:00:03] 2025-07-27 00:59:35,074 | INFO     | [payload] failed_post thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,153 | INFO     | [job] job monitor thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,203 | INFO     | [payload] control thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,218 | INFO     | [data] control thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,219 | INFO     | [job] control thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,324 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,426 | INFO     | [job] validate thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,510 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,550 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:35,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 03:00:03] 2025-07-27 00:59:35,754 | INFO     | [payload] validate_post thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:37,057 | INFO     | [data] copytool_out thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:39,584 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:44,472 | INFO     | job.realtimelogging is not enabled
[2025-07-27 03:00:03] 2025-07-27 00:59:45,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 03:00:03] 2025-07-27 00:59:47,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973592008512)>', '<ExcThread(monitor, started 139973101606656)>']
[2025-07-27 03:00:03] 2025-07-27 00:59:52,083 | INFO     | all workflow threads have been joined
[2025-07-27 03:00:03] 2025-07-27 00:59:52,084 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 03:00:03] 2025-07-27 00:59:52,084 | INFO     | traces error code: 0
[2025-07-27 03:00:03] 2025-07-27 00:59:52,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 03:00:03] 2025-07-27 01:00:03,164 | INFO     | PID=3526706 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 03:00:03] 2025-07-27 01:00:03,164 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 03:00:03] 2025-07-27 01:00:03,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 03:00:03] 2025-07-27 01:00:03,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 03:00:03] 2025-07-27 01:00:03,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 03:00:03] 2025-07-27 01:00:03,164 | INFO     | [monitor] control thread has ended
[2025-07-27 03:00:03] 2025-07-27 01:00:03,210 [wrapper] ==== pilot stdout END ====
[2025-07-27 03:00:03] 2025-07-27 01:00:03,212 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 03:00:03] 2025-07-27 01:00:03,214 [wrapper] pilotpid: 3526706
[2025-07-27 03:00:03] 2025-07-27 01:00:03,216 [wrapper] Pilot exit status: 0
[2025-07-27 03:00:03] 2025-07-27 01:00:03,223 [wrapper] pandaids: 6745099316
[2025-07-27 03:00:03] 2025-07-27 01:00:03,238 [wrapper] cleanup supervisor_pilot 3545319 3526707
[2025-07-27 03:00:03] 2025-07-27 01:00:03,240 [wrapper] Test setup, not cleaning
[2025-07-27 03:00:03] 2025-07-27 01:00:03,243 [wrapper] apfmon messages muted
[2025-07-27 03:00:03] 2025-07-27 01:00:03,245 [wrapper] ==== wrapper stdout END ====
[2025-07-27 03:00:03] 2025-07-27 01:00:03,247 [wrapper] ==== wrapper stderr END ====
[2025-07-27 03:00:03]  *** Error codes and diagnostics ***
[2025-07-27 03:00:03]     "exeErrorCode": 0,
[2025-07-27 03:00:03]     "exeErrorDiag": "",
[2025-07-27 03:00:03]     "pilotErrorCode": 0,
[2025-07-27 03:00:03]     "pilotErrorDiag": "",
[2025-07-27 03:00:03]  *** Listing of results directory ***
[2025-07-27 03:00:03] total 344748
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc    530466 Jul 26 09:16 pilot3.tar.gz
[2025-07-27 03:00:03] -rwx------ 1 boinc boinc     36292 Jul 26 09:24 runpilot2-wrapper.sh
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc      5112 Jul 26 09:24 queuedata.json
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc       100 Jul 27 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 03:00:03] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 01:28 run_atlas
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc       105 Jul 27 01:28 job.xml
[2025-07-27 03:00:03] -rw-r--r-- 2 boinc boinc 146476398 Jul 27 01:28 EVNT.45743347._001930.pool.root.1
[2025-07-27 03:00:03] -rw-r--r-- 2 boinc boinc    542894 Jul 27 01:28 input.tar.gz
[2025-07-27 03:00:03] -rw-r--r-- 2 boinc boinc     15095 Jul 27 01:28 start_atlas.sh
[2025-07-27 03:00:03] drwxrwx--x 2 boinc boinc      4096 Jul 27 01:28 shared
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc         0 Jul 27 01:28 boinc_setup_complete
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc      6445 Jul 27 01:28 init_data.xml
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc         0 Jul 27 01:28 boinc_lockfile
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc      2562 Jul 27 01:28 pandaJob.out
[2025-07-27 03:00:03] -rw------- 1 boinc boinc    980117 Jul 27 01:28 agis_schedconf.cvmfs.json
[2025-07-27 03:00:03] -rw------- 1 boinc boinc   1593052 Jul 27 01:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 03:00:03] drwx------ 4 boinc boinc      4096 Jul 27 01:28 pilot3
[2025-07-27 03:00:03] -rw------- 1 boinc boinc 201151743 Jul 27 02:59 HITS.45743349._034135.pool.root.1
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc       529 Jul 27 02:59 boinc_task_state.xml
[2025-07-27 03:00:03] -rw------- 1 boinc boinc      1024 Jul 27 02:59 memory_monitor_summary.json
[2025-07-27 03:00:03] -rw------- 1 boinc boinc    227011 Jul 27 02:59 log.45743349._034135.job.log.tgz.1
[2025-07-27 03:00:03] -rw------- 1 boinc boinc      7775 Jul 27 02:59 heartbeat.json
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc      8192 Jul 27 02:59 boinc_mmap_file
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc        27 Jul 27 02:59 wrapper_checkpoint.txt
[2025-07-27 03:00:03] -rw------- 1 boinc boinc       747 Jul 27 03:00 pilotlog.txt
[2025-07-27 03:00:03] -rw------- 1 boinc boinc        95 Jul 27 03:00 pilot_heartbeat.json
[2025-07-27 03:00:03] -rw------- 1 boinc boinc    529356 Jul 27 03:00 log.45743349._034135.job.log.1
[2025-07-27 03:00:03] -rw------- 1 boinc boinc       357 Jul 27 03:00 output.list
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc       620 Jul 27 03:00 runtime_log
[2025-07-27 03:00:03] -rw------- 1 boinc boinc    778240 Jul 27 03:00 result.tar.gz
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc      8754 Jul 27 03:00 runtime_log.err
[2025-07-27 03:00:03] -rw------- 1 boinc boinc       663 Jul 27 03:00 FBjMDmeRoz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUM0KDmcmwvNn.diag
[2025-07-27 03:00:03] -rw-r--r-- 1 boinc boinc     21270 Jul 27 03:00 stderr.txt
[2025-07-27 03:00:03] HITS file was successfully produced:
[2025-07-27 03:00:03] -rw------- 1 boinc boinc 201151743 Jul 27 02:59 shared/HITS.pool.root.1
[2025-07-27 03:00:03]  *** Contents of shared directory: ***
[2025-07-27 03:00:03] total 340800
[2025-07-27 03:00:03] -rw-r--r-- 2 boinc boinc 146476398 Jul 27 01:28 ATLAS.root_0
[2025-07-27 03:00:03] -rw-r--r-- 2 boinc boinc    542894 Jul 27 01:28 input.tar.gz
[2025-07-27 03:00:03] -rw-r--r-- 2 boinc boinc     15095 Jul 27 01:28 start_atlas.sh
[2025-07-27 03:00:03] -rw------- 1 boinc boinc 201151743 Jul 27 02:59 HITS.pool.root.1
[2025-07-27 03:00:03] -rw------- 1 boinc boinc    778240 Jul 27 03:00 result.tar.gz
03:00:04 (3523068): run_atlas exited; CPU time 15747.124683
03:00:04 (3523068): called boinc_finish(0)

</stderr_txt>
]]>

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