Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:25:53 (3476519): wrapper (7.7.26015): starting
09:25:53 (3476519): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 09:25:53] Arguments: --nthreads 8
[2025-07-26 09:25:53] Threads: 8
[2025-07-26 09:25:53] Checking for CVMFS
[2025-07-26 09:25:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 09:25:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 09:25:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 09:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 09:25:55] 2.12.6.0 83837 25885 303268 148778 2 372 27056328 32935936 31464 16776704 1 221763949 99.540 284249954 20515 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 09:25:55] CVMFS is ok
[2025-07-26 09:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 09:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 09:25:55] Further information can be found at the LHC@home message board.
[2025-07-26 09:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 09:25:55] Checking for apptainer binary...
[2025-07-26 09:25:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 09:25:55] Running /usr/bin/apptainer --version
[2025-07-26 09:25:56] apptainer version 1.4.1-1.el9
[2025-07-26 09:25:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 09:25:56] c7-2-10.aglt2.org
[2025-07-26 09:25:56] apptainer works
[2025-07-26 09:25:56] Set ATHENA_PROC_NUMBER=8
[2025-07-26 09:25:56] Set ATHENA_CORE_NUMBER=8
[2025-07-26 09:25:56] Starting ATLAS job with PandaID=6745099492
[2025-07-26 09:25:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 13:58:51]  *** The last 200 lines of the pilot log: ***
[2025-07-26 13:58:51] 2025-07-26 17:58:12,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 13:58:51] 2025-07-26 17:58:12,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 13:58:51] 2025-07-26 17:58:12,024 | INFO     | fitting pss+swap vs Time
[2025-07-26 13:58:51] 2025-07-26 17:58:12,025 | INFO     | sum of square deviations: 5705120925.939434
[2025-07-26 13:58:51] 2025-07-26 17:58:12,027 | INFO     | sum of deviations: 163650387138.22736
[2025-07-26 13:58:51] 2025-07-26 17:58:12,035 | INFO     | mean x: 1753544604.6515152
[2025-07-26 13:58:51] 2025-07-26 17:58:12,035 | INFO     | mean y: 2073483.5568181819
[2025-07-26 13:58:51] 2025-07-26 17:58:12,035 | INFO     | -- intersect: -50298044102.13952
[2025-07-26 13:58:51] 2025-07-26 17:58:12,035 | INFO     | intersect: -50298044102.13952
[2025-07-26 13:58:51] 2025-07-26 17:58:12,035 | INFO     | chi2: 5.551292116219926
[2025-07-26 13:58:51] 2025-07-26 17:58:12,036 | INFO     | sum of square deviations: 5387062045.822414
[2025-07-26 13:58:51] 2025-07-26 17:58:12,037 | INFO     | sum of deviations: 174246347711.28192
[2025-07-26 13:58:51] 2025-07-26 17:58:12,038 | INFO     | mean x: 1753544452.1544402
[2025-07-26 13:58:51] 2025-07-26 17:58:12,038 | INFO     | mean y: 2078448.667953668
[2025-07-26 13:58:51] 2025-07-26 17:58:12,038 | INFO     | -- intersect: -56716911185.81016
[2025-07-26 13:58:51] 2025-07-26 17:58:12,038 | INFO     | intersect: -56716911185.81016
[2025-07-26 13:58:51] 2025-07-26 17:58:12,044 | INFO     | chi2: 4.780881493876084
[2025-07-26 13:58:51] 2025-07-26 17:58:12,045 | INFO     | current chi2=4.780881493876084 (change=13.878041476016623 %)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,045 | INFO     | right removable region: 258
[2025-07-26 13:58:51] 2025-07-26 17:58:12,045 | INFO     | sum of square deviations: 5387037645.822414
[2025-07-26 13:58:51] 2025-07-26 17:58:12,047 | INFO     | sum of deviations: 93994168266.08496
[2025-07-26 13:58:51] 2025-07-26 17:58:12,047 | INFO     | mean x: 1753544757.1544402
[2025-07-26 13:58:51] 2025-07-26 17:58:12,047 | INFO     | mean y: 2106821.447876448
[2025-07-26 13:58:51] 2025-07-26 17:58:12,047 | INFO     | -- intersect: -30594111694.660667
[2025-07-26 13:58:51] 2025-07-26 17:58:12,047 | INFO     | intersect: -30594111694.660667
[2025-07-26 13:58:51] 2025-07-26 17:58:12,048 | INFO     | chi2: 1.8523963122921967
[2025-07-26 13:58:51] 2025-07-26 17:58:12,048 | INFO     | current chi2=1.8523963122921967 (change=66.6312585698776 %)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,048 | INFO     | sum of square deviations: 5081016657.511812
[2025-07-26 13:58:51] 2025-07-26 17:58:12,057 | INFO     | sum of deviations: 61911100471.81105
[2025-07-26 13:58:51] 2025-07-26 17:58:12,057 | INFO     | mean x: 1753544909.6535432
[2025-07-26 13:58:51] 2025-07-26 17:58:12,057 | INFO     | mean y: 2122799.0433070865
[2025-07-26 13:58:51] 2025-07-26 17:58:12,057 | INFO     | -- intersect: -21364446610.425503
[2025-07-26 13:58:51] 2025-07-26 17:58:12,057 | INFO     | intersect: -21364446610.425503
[2025-07-26 13:58:51] 2025-07-26 17:58:12,058 | INFO     | chi2: 1.2227085958484216
[2025-07-26 13:58:51] 2025-07-26 17:58:12,058 | INFO     | current chi2=1.2227085958484216 (change=33.99314241046968 %)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,058 | INFO     | sum of square deviations: 4786840952.795142
[2025-07-26 13:58:51] 2025-07-26 17:58:12,069 | INFO     | sum of deviations: 42756451975.77109
[2025-07-26 13:58:51] 2025-07-26 17:58:12,069 | INFO     | mean x: 1753545062.1445782
[2025-07-26 13:58:51] 2025-07-26 17:58:12,069 | INFO     | mean y: 2132707.200803213
[2025-07-26 13:58:51] 2025-07-26 17:58:12,069 | INFO     | -- intersect: -15660674136.873556
[2025-07-26 13:58:51] 2025-07-26 17:58:12,070 | INFO     | intersect: -15660674136.873556
[2025-07-26 13:58:51] 2025-07-26 17:58:12,070 | INFO     | chi2: 0.9999885985627761
[2025-07-26 13:58:51] 2025-07-26 17:58:12,070 | INFO     | current chi2=0.9999885985627761 (change=18.215296599849534 %)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,070 | INFO     | left removable region: 30
[2025-07-26 13:58:51] 2025-07-26 17:58:12,070 | INFO     | sum of square deviations: 3675019871.561406
[2025-07-26 13:58:51] 2025-07-26 17:58:12,072 | INFO     | sum of deviations: 37718501160.394745
[2025-07-26 13:58:51] 2025-07-26 17:58:12,072 | INFO     | mean x: 1753545336.622807
[2025-07-26 13:58:51] 2025-07-26 17:58:12,072 | INFO     | mean y: 2148533.039473684
[2025-07-26 13:58:51] 2025-07-26 17:58:12,072 | INFO     | -- intersect: -17995332875.438126
[2025-07-26 13:58:51] 2025-07-26 17:58:12,079 | INFO     | intersect: -17995332875.438126
[2025-07-26 13:58:51] 2025-07-26 17:58:12,080 | INFO     | chi2: 0.1079632525988237
[2025-07-26 13:58:51] 2025-07-26 17:58:12,080 | INFO     | -- intersect: -17995332875.438126
[2025-07-26 13:58:51] 2025-07-26 17:58:12,080 | INFO     | current memory leak: 10.26 B/s (using 228 data points, chi2=0.11)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,081 | INFO     | could have reported an average CPU frequency of 3283 MHz (12 samples)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,081 | INFO     | ..............................
[2025-07-26 13:58:51] 2025-07-26 17:58:12,081 | INFO     | . Timing measurements:
[2025-07-26 13:58:51] 2025-07-26 17:58:12,081 | INFO     | . get job = 0 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,081 | INFO     | . initial setup = 7 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,081 | INFO     | . payload setup = 61 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,082 | INFO     | . stage-in = 0 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,082 | INFO     | . payload execution = 16114 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,082 | INFO     | . stage-out = 3 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,082 | INFO     | . log creation = 0 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,082 | INFO     | ..............................
[2025-07-26 13:58:51] 2025-07-26 17:58:12,841 | INFO     | 
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | job summary report
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | --------------------------------------------------
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | PanDA job id: 6745099492
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | task id: 45743349
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | errors: (none)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | pilot state: finished 
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | transexitcode: 0
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | exeerrorcode: 0
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | exeerrordiag: 
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | exitcode: 0
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | exitmsg: OK
[2025-07-26 13:58:51] 2025-07-26 17:58:12,842 | INFO     | cpuconsumptiontime: 37586 s
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | nevents: 400
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | neventsw: 0
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | pid: 3541911
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | pgrp: 3541911
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | corecount: 8
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | event service: False
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | sizes: {0: 2396647, 1: 2397248, 2: 2397360, 3: 2397531, 4: 2397559, 15: 2397587, 26: 2397743, 34: 2398033, 37: 2398061, 16181: 2429138, 16182: 2429137, 16187: 2438
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | --------------------------------------------------
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | 
[2025-07-26 13:58:51] 2025-07-26 17:58:12,843 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | job 6745099492 has completed (purged errors)
[2025-07-26 13:58:51] 2025-07-26 17:58:12,881 | INFO     | overall cleanup function is called
[2025-07-26 13:58:51] 2025-07-26 17:58:13,942 | INFO     | --- collectZombieJob: --- 10, [3541911]
[2025-07-26 13:58:51] 2025-07-26 17:58:13,942 | INFO     | zombie collector waiting for pid 3541911
[2025-07-26 13:58:51] 2025-07-26 17:58:13,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 13:58:51] 2025-07-26 17:58:13,943 | INFO     | collected zombie processes
[2025-07-26 13:58:51] 2025-07-26 17:58:13,943 | INFO     | will attempt to kill all subprocesses of pid=3541911
[2025-07-26 13:58:51] 2025-07-26 17:58:15,956 | INFO     | PID=3501692 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 13:58:51] 2025-07-26 17:58:15,956 | INFO     | .. there are 58 such processes running
[2025-07-26 13:58:51] 2025-07-26 17:58:17,022 | INFO     | process IDs to be killed: [3541911] (in reverse order)
[2025-07-26 13:58:51] 2025-07-26 17:58:17,315 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 13:58:51] 2025-07-26 17:58:17,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 13:58:51] 2025-07-26 17:58:17,421 | INFO     | did not find any defunct processes belonging to 3541911
[2025-07-26 13:58:51] 2025-07-26 17:58:17,473 | INFO     | did not find any defunct processes belonging to 3541911
[2025-07-26 13:58:51] 2025-07-26 17:58:17,473 | INFO     | ready for new job
[2025-07-26 13:58:51] 2025-07-26 17:58:17,473 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 13:58:51] 2025-07-26 17:58:17,475 | INFO     | ***************************************
[2025-07-26 13:58:51] 2025-07-26 17:58:17,475 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 13:58:51] 2025-07-26 17:58:17,475 | INFO     | ***************************************
[2025-07-26 13:58:51] 2025-07-26 17:58:17,475 | INFO     | 
[2025-07-26 13:58:51] 2025-07-26 17:58:17,501 | INFO     | architecture information:
[2025-07-26 13:58:51] 2025-07-26 17:58:17,502 | INFO     | executing command: cat /etc/os-release
[2025-07-26 13:58:51] 2025-07-26 17:58:17,530 | INFO     | cat /etc/os-release:
[2025-07-26 13:58:51] NAME="CentOS Linux"
[2025-07-26 13:58:51] VERSION="7 (Core)"
[2025-07-26 13:58:51] ID="centos"
[2025-07-26 13:58:51] ID_LIKE="rhel fedora"
[2025-07-26 13:58:51] VERSION_ID="7"
[2025-07-26 13:58:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 13:58:51] ANSI_COLOR="0;31"
[2025-07-26 13:58:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 13:58:51] HOME_URL="https://www.centos.org/"
[2025-07-26 13:58:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 13:58:51] 
[2025-07-26 13:58:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 13:58:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 13:58:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 13:58:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 13:58:51] 
[2025-07-26 13:58:51] 2025-07-26 17:58:17,530 | INFO     | ***************************************
[2025-07-26 13:58:51] 2025-07-26 17:58:18,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-07-26 13:58:51] 2025-07-26 17:58:18,068 | INFO     | sufficient remaining disk space (75066507264 B)
[2025-07-26 13:58:51] 2025-07-26 17:58:18,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 13:58:51] 2025-07-26 17:58:18,069 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 13:58:51] 2025-07-26 17:58:18,069 | INFO     | update_server=False
[2025-07-26 13:58:51] 2025-07-26 17:58:18,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 13:58:51] 2025-07-26 17:58:18,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:58:51] 2025-07-26 17:58:18,113 | INFO     | all payload control threads have been joined
[2025-07-26 13:58:51] 2025-07-26 17:58:18,520 | INFO     | all data control threads have been joined
[2025-07-26 13:58:51] 2025-07-26 17:58:18,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 13:58:51] 2025-07-26 17:58:18,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 13:58:51] 2025-07-26 17:58:18,918 | INFO     | aborting loop
[2025-07-26 13:58:51] 2025-07-26 17:58:18,928 | INFO     | all job control threads have been joined
[2025-07-26 13:58:51] 2025-07-26 17:58:19,074 | INFO     | [job] retrieve thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,078 | INFO     | [job] queue monitor thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,121 | INFO     | [payload] control thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,139 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,165 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,219 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,432 | INFO     | [job] validate thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,433 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,439 | INFO     | [payload] validate_post thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,462 | INFO     | [data] copytool_in thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,526 | INFO     | [data] control thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,923 | INFO     | [job] job monitor thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:19,934 | INFO     | [job] control thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:20,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 13:58:51] 2025-07-26 17:58:20,466 | INFO     | [payload] failed_post thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:20,727 | INFO     | [data] copytool_out thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:24,483 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 13:58:51] 2025-07-26 17:58:26,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932249847616)>', '<ExcThread(monitor, started 139931603150592)>']
[2025-07-26 13:58:51] 2025-07-26 17:58:31,479 | INFO     | all workflow threads have been joined
[2025-07-26 13:58:51] 2025-07-26 17:58:31,480 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 13:58:51] 2025-07-26 17:58:31,480 | INFO     | traces error code: 0
[2025-07-26 13:58:51] 2025-07-26 17:58:31,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 13:58:51] 2025-07-26 17:58:50,509 | INFO     | PID=3501692 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 13:58:51] 2025-07-26 17:58:50,510 | INFO     | .. there are 58 such processes running
[2025-07-26 13:58:51] 2025-07-26 17:58:50,510 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 13:58:51] 2025-07-26 17:58:50,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 13:58:51] 2025-07-26 17:58:50,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 13:58:51] 2025-07-26 17:58:50,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 13:58:51] 2025-07-26 17:58:50,510 | INFO     | [monitor] control thread has ended
[2025-07-26 13:58:51] 2025-07-26 17:58:51,312 [wrapper] ==== pilot stdout END ====
[2025-07-26 13:58:51] 2025-07-26 17:58:51,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 13:58:51] 2025-07-26 17:58:51,320 [wrapper] pilotpid: 3501692
[2025-07-26 13:58:51] 2025-07-26 17:58:51,325 [wrapper] Pilot exit status: 0
[2025-07-26 13:58:51] 2025-07-26 17:58:51,348 [wrapper] pandaids: 6745099492
[2025-07-26 13:58:51] 2025-07-26 17:58:51,511 [wrapper] cleanup supervisor_pilot 3143294 3501693
[2025-07-26 13:58:51] 2025-07-26 17:58:51,530 [wrapper] Test setup, not cleaning
[2025-07-26 13:58:51] 2025-07-26 17:58:51,542 [wrapper] apfmon messages muted
[2025-07-26 13:58:51] 2025-07-26 17:58:51,555 [wrapper] ==== wrapper stdout END ====
[2025-07-26 13:58:51] 2025-07-26 17:58:51,565 [wrapper] ==== wrapper stderr END ====
[2025-07-26 13:58:51]  *** Error codes and diagnostics ***
[2025-07-26 13:58:51]     "exeErrorCode": 0,
[2025-07-26 13:58:51]     "exeErrorDiag": "",
[2025-07-26 13:58:51]     "pilotErrorCode": 0,
[2025-07-26 13:58:51]     "pilotErrorDiag": "",
[2025-07-26 13:58:51]  *** Listing of results directory ***
[2025-07-26 13:58:51] total 353748
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 03:16 pilot3.tar.gz
[2025-07-26 13:58:51] -rwx------. 1 boincer umatlas     36292 Jul 26 03:28 runpilot2-wrapper.sh
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 03:28 queuedata.json
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas       100 Jul 26 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 13:58:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 09:25 run_atlas
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas       105 Jul 26 09:25 job.xml
[2025-07-26 13:58:51] -rw-r--r--. 2 boincer umatlas 144620081 Jul 26 09:25 EVNT.45743347._001941.pool.root.1
[2025-07-26 13:58:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 09:25 start_atlas.sh
[2025-07-26 13:58:51] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 09:25 shared
[2025-07-26 13:58:51] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 09:25 input.tar.gz
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas         0 Jul 26 09:25 boinc_lockfile
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 09:25 pandaJob.out
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas    980133 Jul 26 09:26 agis_schedconf.cvmfs.json
[2025-07-26 13:58:51] drwx------. 4 boincer umatlas      4096 Jul 26 09:27 pilot3
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas 210524839 Jul 26 13:56 HITS.45743349._034311.pool.root.1
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas       529 Jul 26 13:56 boinc_task_state.xml
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas      1046 Jul 26 13:57 memory_monitor_summary.json
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas   1593052 Jul 26 13:57 agis_ddmendpoints.agis.ALL.json
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas    420435 Jul 26 13:57 log.45743349._034311.job.log.tgz.1
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas      7790 Jul 26 13:58 heartbeat.json
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas      6931 Jul 26 13:58 init_data.xml
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas        27 Jul 26 13:58 wrapper_checkpoint.txt
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 13:58 boinc_mmap_file
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas        95 Jul 26 13:58 pilot_heartbeat.json
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas       823 Jul 26 13:58 pilotlog.txt
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas   1188969 Jul 26 13:58 log.45743349._034311.job.log.1
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas       357 Jul 26 13:58 output.list
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas       620 Jul 26 13:58 runtime_log
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas   1628160 Jul 26 13:58 result.tar.gz
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas       657 Jul 26 13:58 s6BMDmZVoz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDYRLDmQTTMCo.diag
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas      8656 Jul 26 13:58 runtime_log.err
[2025-07-26 13:58:51] -rw-r--r--. 1 boincer umatlas     21151 Jul 26 13:58 stderr.txt
[2025-07-26 13:58:51] HITS file was successfully produced:
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas 210524839 Jul 26 13:56 shared/HITS.pool.root.1
[2025-07-26 13:58:51]  *** Contents of shared directory: ***
[2025-07-26 13:58:51] total 348968
[2025-07-26 13:58:51] -rw-r--r--. 2 boincer umatlas 144620081 Jul 26 09:25 ATLAS.root_0
[2025-07-26 13:58:51] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 09:25 start_atlas.sh
[2025-07-26 13:58:51] -rw-r--r--. 2 boincer umatlas    542896 Jul 26 09:25 input.tar.gz
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas 210524839 Jul 26 13:56 HITS.pool.root.1
[2025-07-26 13:58:51] -rw-------. 1 boincer umatlas   1628160 Jul 26 13:58 result.tar.gz
13:58:53 (3476519): run_atlas exited; CPU time 38377.166606
13:58:53 (3476519): called boinc_finish(0)

</stderr_txt>
]]>

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