Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:56 (1281058): wrapper (7.7.26015): starting
11:02:56 (1281058): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 11:02:56] Arguments: --nthreads 12
[2025-07-26 11:02:56] Threads: 12
[2025-07-26 11:02:56] Checking for CVMFS
[2025-07-26 11:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 11:02:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 11:02:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 11:02:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 11:02:56] 2.12.6.0 1267368 17076 337108 148780 0 228 28935083 32935937 10908 16776704 0 32071292 99.702 62661127 29658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 11:02:56] CVMFS is ok
[2025-07-26 11:02:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 11:02:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 11:02:56] Further information can be found at the LHC@home message board.
[2025-07-26 11:02:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 11:02:56] Checking for apptainer binary...
[2025-07-26 11:02:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 11:02:56] Running /usr/bin/apptainer --version
[2025-07-26 11:02:56] apptainer version 1.4.1-1.el9
[2025-07-26 11:02:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 11:02:57] c6-2-29-3.aglt2.org
[2025-07-26 11:02:57] apptainer works
[2025-07-26 11:02:57] Set ATHENA_PROC_NUMBER=12
[2025-07-26 11:02:57] Set ATHENA_CORE_NUMBER=12
[2025-07-26 11:02:57] Starting ATLAS job with PandaID=6745096131
[2025-07-26 11:02:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:44:13]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:44:13]  replicas=None
[2025-07-26 12:44:13]  scope=mc23_13p6TeV
[2025-07-26 12:44:13]  status=None
[2025-07-26 12:44:13]  status_code=0
[2025-07-26 12:44:13]  storage_token=
[2025-07-26 12:44:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745096131/log.45743349._032234.job.log.tgz.1
[2025-07-26 12:44:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/d5/log.45743349._032234.job.log.tgz.1
[2025-07-26 12:44:13]  workdir=None
[2025-07-26 12:44:13] ]
[2025-07-26 12:44:13] 2025-07-26 16:43:32,626 | INFO     | transferring file log.45743349._032234.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745096131/log.45743349._032234.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 12:44:13] 2025-07-26 16:43:32,626 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745096131/log.45743349._032234.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._032234.job
[2025-07-26 12:44:13] 2025-07-26 16:43:32,655 | INFO     | adding to output.list: log.45743349._032234.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/d5/log.45743349._032234.job.log.tg
[2025-07-26 12:44:13] 2025-07-26 16:43:32,656 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 12:44:13] 2025-07-26 16:43:32,656 | INFO     | summary of transferred files:
[2025-07-26 12:44:13] 2025-07-26 16:43:32,656 | INFO     |  -- lfn=log.45743349._032234.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 12:44:13] 2025-07-26 16:43:32,657 | INFO     | stage-out finished correctly
[2025-07-26 12:44:13] 2025-07-26 16:43:32,866 | INFO     | PID=1286503 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 12:44:13] 2025-07-26 16:43:32,866 | INFO     | .. there are 11 such processes running
[2025-07-26 12:44:13] 2025-07-26 16:43:33,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 12:44:13] 2025-07-26 16:43:33,694 | INFO     | monitor loop #405: job 0:6745096131 is in state 'finished'
[2025-07-26 12:44:13] 2025-07-26 16:43:33,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:44:13] 2025-07-26 16:43:34,704 | INFO     | job 6745096131 has state=finished
[2025-07-26 12:44:13] 2025-07-26 16:43:34,705 | INFO     | preparing for final server update for job 6745096131 in state='finished'
[2025-07-26 12:44:13] 2025-07-26 16:43:34,706 | INFO     | this job has now completed (state=finished)
[2025-07-26 12:44:13] 2025-07-26 16:43:34,706 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 12:44:13] 2025-07-26 16:43:34,706 | INFO     | log transfer has been attempted: DONE
[2025-07-26 12:44:13] 2025-07-26 16:43:34,707 | INFO     | job 6745096131 has finished - writing final server update
[2025-07-26 12:44:13] 2025-07-26 16:43:34,707 | INFO     | total number of processed events: 400 (read)
[2025-07-26 12:44:13] 2025-07-26 16:43:34,708 | INFO     | executing command: lscpu
[2025-07-26 12:44:13] 2025-07-26 16:43:34,779 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 12:44:13] 2025-07-26 16:43:36,197 | INFO     | monitor loop #406: job 0:6745096131 is in state 'finished'
[2025-07-26 12:44:13] 2025-07-26 16:43:36,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:44:13] 2025-07-26 16:43:38,703 | INFO     | monitor loop #407: job 0:6745096131 is in state 'finished'
[2025-07-26 12:44:13] 2025-07-26 16:43:38,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,043 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 12:44:13] 2025-07-26 16:43:41,052 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2705.125160714285
[2025-07-26 12:44:13] 2025-07-26 16:43:41,063 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745096131/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,065 | INFO     | extracted standard info from prmon json
[2025-07-26 12:44:13] 2025-07-26 16:43:41,065 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:44:13] 2025-07-26 16:43:41,065 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:44:13] 2025-07-26 16:43:41,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:44:13] 2025-07-26 16:43:41,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:44:13] 2025-07-26 16:43:41,068 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:44:13] 2025-07-26 16:43:41,069 | INFO     | sum of square deviations: 241461127.91304326
[2025-07-26 12:44:13] 2025-07-26 16:43:41,069 | INFO     | sum of deviations: -4221732668.30435
[2025-07-26 12:44:13] 2025-07-26 16:43:41,069 | INFO     | mean x: 1753545308.6086957
[2025-07-26 12:44:13] 2025-07-26 16:43:41,070 | INFO     | mean y: 2382290.8804347827
[2025-07-26 12:44:13] 2025-07-26 16:43:41,070 | INFO     | -- intersect: 30661559520.315006
[2025-07-26 12:44:13] 2025-07-26 16:43:41,070 | INFO     | intersect: 30661559520.315006
[2025-07-26 12:44:13] 2025-07-26 16:43:41,070 | INFO     | chi2: 0.12654129973478415
[2025-07-26 12:44:13] 2025-07-26 16:43:41,070 | INFO     | -- intersect: 30661559520.315006
[2025-07-26 12:44:13] 2025-07-26 16:43:41,070 | INFO     | current memory leak: -17.48 B/s (using 92 data points, chi2=0.13)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | could have reported an average CPU frequency of 2626 MHz (7 samples)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | ..............................
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . Timing measurements:
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . get job = 0 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . initial setup = 10 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . payload setup = 8 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . stage-in = 0 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . payload execution = 5984 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . stage-out = 1 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | . log creation = 0 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,071 | INFO     | ..............................
[2025-07-26 12:44:13] 2025-07-26 16:43:41,183 | INFO     | 
[2025-07-26 12:44:13] 2025-07-26 16:43:41,183 | INFO     | job summary report
[2025-07-26 12:44:13] 2025-07-26 16:43:41,183 | INFO     | --------------------------------------------------
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | PanDA job id: 6745096131
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | task id: 45743349
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | errors: (none)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | pilot state: finished 
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | transexitcode: 0
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | exeerrorcode: 0
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | exeerrordiag: 
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | exitcode: 0
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | exitmsg: OK
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | cpuconsumptiontime: 47594 s
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | nevents: 400
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | neventsw: 0
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | pid: 1294360
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | pgrp: 1294360
[2025-07-26 12:44:13] 2025-07-26 16:43:41,184 | INFO     | corecount: 12
[2025-07-26 12:44:13] 2025-07-26 16:43:41,185 | INFO     | event service: False
[2025-07-26 12:44:13] 2025-07-26 16:43:41,185 | INFO     | sizes: {0: 2397360, 1: 2397502, 6: 2397764, 11: 2397792, 5996: 2424501, 5997: 2424500, 5998: 2433682, 5999: 2433738, 6006: 2433932}
[2025-07-26 12:44:13] 2025-07-26 16:43:41,185 | INFO     | --------------------------------------------------
[2025-07-26 12:44:13] 2025-07-26 16:43:41,185 | INFO     | 
[2025-07-26 12:44:13] 2025-07-26 16:43:41,185 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 12:44:13] 2025-07-26 16:43:41,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | job 6745096131 has completed (purged errors)
[2025-07-26 12:44:13] 2025-07-26 16:43:41,211 | INFO     | overall cleanup function is called
[2025-07-26 12:44:13] 2025-07-26 16:43:42,221 | INFO     | --- collectZombieJob: --- 10, [1294360]
[2025-07-26 12:44:13] 2025-07-26 16:43:42,221 | INFO     | zombie collector waiting for pid 1294360
[2025-07-26 12:44:13] 2025-07-26 16:43:42,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:44:13] 2025-07-26 16:43:42,221 | INFO     | collected zombie processes
[2025-07-26 12:44:13] 2025-07-26 16:43:42,221 | INFO     | will attempt to kill all subprocesses of pid=1294360
[2025-07-26 12:44:13] 2025-07-26 16:43:42,521 | INFO     | process IDs to be killed: [1294360] (in reverse order)
[2025-07-26 12:44:13] 2025-07-26 16:43:42,638 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:44:13] 2025-07-26 16:43:42,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:44:13] 2025-07-26 16:43:42,653 | INFO     | did not find any defunct processes belonging to 1294360
[2025-07-26 12:44:13] 2025-07-26 16:43:42,668 | INFO     | did not find any defunct processes belonging to 1294360
[2025-07-26 12:44:13] 2025-07-26 16:43:42,668 | INFO     | ready for new job
[2025-07-26 12:44:13] 2025-07-26 16:43:42,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:44:13] 2025-07-26 16:43:42,671 | INFO     | ***************************************
[2025-07-26 12:44:13] 2025-07-26 16:43:42,671 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:44:13] 2025-07-26 16:43:42,671 | INFO     | ***************************************
[2025-07-26 12:44:13] 2025-07-26 16:43:42,671 | INFO     | 
[2025-07-26 12:44:13] 2025-07-26 16:43:42,687 | INFO     | architecture information:
[2025-07-26 12:44:13] 2025-07-26 16:43:42,688 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:44:13] 2025-07-26 16:43:42,704 | INFO     | cat /etc/os-release:
[2025-07-26 12:44:13] NAME="CentOS Linux"
[2025-07-26 12:44:13] VERSION="7 (Core)"
[2025-07-26 12:44:13] ID="centos"
[2025-07-26 12:44:13] ID_LIKE="rhel fedora"
[2025-07-26 12:44:13] VERSION_ID="7"
[2025-07-26 12:44:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:44:13] ANSI_COLOR="0;31"
[2025-07-26 12:44:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:44:13] HOME_URL="https://www.centos.org/"
[2025-07-26 12:44:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:44:13] 
[2025-07-26 12:44:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:44:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:44:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:44:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:44:13] 
[2025-07-26 12:44:13] 2025-07-26 16:43:42,705 | INFO     | ***************************************
[2025-07-26 12:44:13] 2025-07-26 16:43:43,207 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 12:44:13] 2025-07-26 16:43:43,232 | INFO     | sufficient remaining disk space (76541853696 B)
[2025-07-26 12:44:13] 2025-07-26 16:43:43,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:44:13] 2025-07-26 16:43:43,232 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:44:13] 2025-07-26 16:43:43,232 | INFO     | update_server=False
[2025-07-26 12:44:13] 2025-07-26 16:43:43,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:44:13] 2025-07-26 16:43:43,309 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:44:13] 2025-07-26 16:43:43,642 | INFO     | all job control threads have been joined
[2025-07-26 12:44:13] 2025-07-26 16:43:43,718 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 12:44:13] 2025-07-26 16:43:43,718 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 12:44:13] 2025-07-26 16:43:43,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:44:13] 2025-07-26 16:43:43,718 | INFO     | will abort loop
[2025-07-26 12:44:13] 2025-07-26 16:43:43,744 | INFO     | all payload control threads have been joined
[2025-07-26 12:44:13] 2025-07-26 16:43:44,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:44:13] 2025-07-26 16:43:44,237 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:44,253 | INFO     | all data control threads have been joined
[2025-07-26 12:44:13] 2025-07-26 16:43:44,354 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:44,647 | INFO     | [job] control thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:44,724 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:44,750 | INFO     | [payload] control thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,073 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,162 | INFO     | [job] validate thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,177 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,259 | INFO     | [data] control thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,315 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,321 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,562 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:45,653 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:46,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:44:13] 2025-07-26 16:43:47,206 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:48,222 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:53,832 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:44:13] 2025-07-26 16:43:54,837 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:44:13] 2025-07-26 16:43:56,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422385280832)>', '<ExcThread(monitor, started 140421539821312)>']
[2025-07-26 12:44:13] 2025-07-26 16:44:01,950 | INFO     | all workflow threads have been joined
[2025-07-26 12:44:13] 2025-07-26 16:44:01,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:44:13] 2025-07-26 16:44:01,951 | INFO     | traces error code: 0
[2025-07-26 12:44:13] 2025-07-26 16:44:01,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:44:13] 2025-07-26 16:44:13,367 | INFO     | PID=1286503 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:44:13] 2025-07-26 16:44:13,367 | INFO     | .. there are 11 such processes running
[2025-07-26 12:44:13] 2025-07-26 16:44:13,368 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:44:13] 2025-07-26 16:44:13,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:44:13] 2025-07-26 16:44:13,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:44:13] 2025-07-26 16:44:13,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:44:13] 2025-07-26 16:44:13,369 | INFO     | [monitor] control thread has ended
[2025-07-26 12:44:13] 2025-07-26 16:44:13,558 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:44:13] 2025-07-26 16:44:13,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:44:13] 2025-07-26 16:44:13,564 [wrapper] pilotpid: 1286503
[2025-07-26 12:44:13] 2025-07-26 16:44:13,567 [wrapper] Pilot exit status: 0
[2025-07-26 12:44:13] 2025-07-26 16:44:13,578 [wrapper] pandaids: 6745096131
[2025-07-26 12:44:13] 2025-07-26 16:44:13,657 [wrapper] cleanup supervisor_pilot 1593523 1286504
[2025-07-26 12:44:13] 2025-07-26 16:44:13,663 [wrapper] Test setup, not cleaning
[2025-07-26 12:44:13] 2025-07-26 16:44:13,666 [wrapper] apfmon messages muted
[2025-07-26 12:44:13] 2025-07-26 16:44:13,672 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:44:13] 2025-07-26 16:44:13,681 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:44:13]  *** Error codes and diagnostics ***
[2025-07-26 12:44:13]     "exeErrorCode": 0,
[2025-07-26 12:44:13]     "exeErrorDiag": "",
[2025-07-26 12:44:13]     "pilotErrorCode": 0,
[2025-07-26 12:44:13]     "pilotErrorDiag": "",
[2025-07-26 12:44:13]  *** Listing of results directory ***
[2025-07-26 12:44:13] total 347496
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 00:24 pilot3.tar.gz
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 00:43 queuedata.json
[2025-07-26 12:44:13] -rwx------. 1 boincer umatlas     36292 Jul 26 00:44 runpilot2-wrapper.sh
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas       100 Jul 26 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:44:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 11:02 run_atlas
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas       105 Jul 26 11:02 job.xml
[2025-07-26 12:44:13] -rw-r--r--. 2 boincer umatlas 144354879 Jul 26 11:02 EVNT.45743347._001812.pool.root.1
[2025-07-26 12:44:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:02 start_atlas.sh
[2025-07-26 12:44:13] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 11:02 shared
[2025-07-26 12:44:13] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 11:02 input.tar.gz
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas         0 Jul 26 11:02 boinc_lockfile
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 11:02 pandaJob.out
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas    980133 Jul 26 11:03 agis_schedconf.cvmfs.json
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:03 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:44:13] drwx------. 4 boincer umatlas      4096 Jul 26 11:03 pilot3
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas      6842 Jul 26 12:36 init_data.xml
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas 205765493 Jul 26 12:42 HITS.45743349._032234.pool.root.1
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:43 boinc_task_state.xml
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas      1052 Jul 26 12:43 memory_monitor_summary.json
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas    367342 Jul 26 12:43 log.45743349._032234.job.log.tgz.1
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas      7821 Jul 26 12:43 heartbeat.json
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:44 boinc_mmap_file
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:44 wrapper_checkpoint.txt
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas       823 Jul 26 12:44 pilotlog.txt
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas        95 Jul 26 12:44 pilot_heartbeat.json
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas    555974 Jul 26 12:44 log.45743349._032234.job.log.1
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas       357 Jul 26 12:44 output.list
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:44 runtime_log
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas    942080 Jul 26 12:44 result.tar.gz
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 12:44 runtime_log.err
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas       654 Jul 26 12:44 JKQNDmvwlz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoGRLDmByy8Xm.diag
[2025-07-26 12:44:13] -rw-r--r--. 1 boincer umatlas     21976 Jul 26 12:44 stderr.txt
[2025-07-26 12:44:13] HITS file was successfully produced:
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas 205765493 Jul 26 12:42 shared/HITS.pool.root.1
[2025-07-26 12:44:13]  *** Contents of shared directory: ***
[2025-07-26 12:44:13] total 343388
[2025-07-26 12:44:13] -rw-r--r--. 2 boincer umatlas 144354879 Jul 26 11:02 ATLAS.root_0
[2025-07-26 12:44:13] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 11:02 start_atlas.sh
[2025-07-26 12:44:13] -rw-r--r--. 2 boincer umatlas    542891 Jul 26 11:02 input.tar.gz
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas 205765493 Jul 26 12:42 HITS.pool.root.1
[2025-07-26 12:44:13] -rw-------. 1 boincer umatlas    942080 Jul 26 12:44 result.tar.gz
12:44:15 (1281058): run_atlas exited; CPU time 47672.950100
12:44:15 (1281058): called boinc_finish(0)

</stderr_txt>
]]>

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