Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:25:03 (14659): wrapper (7.7.26015): starting
05:25:03 (14659): wrapper: running run_atlas (--nthreads 8)
[2025-07-27 05:25:03] Arguments: --nthreads 8
[2025-07-27 05:25:03] Threads: 8
[2025-07-27 05:25:03] Checking for CVMFS
[2025-07-27 05:25:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 05:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 05:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 05:25:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 05:25:05] 2.11.2.0 20081 109000 105856 148799 1 109 18498237 25165824 4353 130560 0 72421273 99.872 47407743 3190 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-27 05:25:05] CVMFS is ok
[2025-07-27 05:25:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 05:25:05] Checking for apptainer binary...
[2025-07-27 05:25:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 05:25:05] Running /usr/bin/apptainer --version
[2025-07-27 05:25:05] apptainer version 1.3.2-1.el7
[2025-07-27 05:25:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 05:25:06] cg-vwn273.simple-grid.lan
[2025-07-27 05:25:06] apptainer works
[2025-07-27 05:25:06] Set ATHENA_PROC_NUMBER=8
[2025-07-27 05:25:06] Set ATHENA_CORE_NUMBER=8
[2025-07-27 05:25:07] Starting ATLAS job with PandaID=6745099278
[2025-07-27 05:25:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 12:23:29]  *** The last 200 lines of the pilot log: ***
[2025-07-27 12:23:29] 2025-07-27 08:05:46,621 | INFO     | fitting pss+swap vs Time
[2025-07-27 12:23:29] 2025-07-27 08:05:46,622 | INFO     | sum of square deviations: 6309000152.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,628 | INFO     | sum of deviations: -36909415546.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,628 | INFO     | mean x: 1753595085.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,628 | INFO     | mean y: 2515956.3113553114
[2025-07-27 12:23:29] 2025-07-27 08:05:46,628 | INFO     | -- intersect: 10261537692.294378
[2025-07-27 12:23:29] 2025-07-27 08:05:46,628 | INFO     | intersect: 10261537692.294378
[2025-07-27 12:23:29] 2025-07-27 08:05:46,629 | INFO     | chi2: 2.6997750238353095
[2025-07-27 12:23:29] 2025-07-27 08:05:46,629 | INFO     | sum of square deviations: 5968658887.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,635 | INFO     | sum of deviations: -18103561181.499973
[2025-07-27 12:23:29] 2025-07-27 08:05:46,636 | INFO     | mean x: 1753594932.5
[2025-07-27 12:23:29] 2025-07-27 08:05:46,636 | INFO     | mean y: 2524261.630597015
[2025-07-27 12:23:29] 2025-07-27 08:05:46,636 | INFO     | -- intersect: 5321359488.958954
[2025-07-27 12:23:29] 2025-07-27 08:05:46,636 | INFO     | intersect: 5321359488.958954
[2025-07-27 12:23:29] 2025-07-27 08:05:46,637 | INFO     | chi2: 1.9268352361699568
[2025-07-27 12:23:29] 2025-07-27 08:05:46,637 | INFO     | current chi2=1.9268352361699568 (change=28.62978510584604 %)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,637 | INFO     | sum of square deviations: 5640782972.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,643 | INFO     | sum of deviations: -17822745577.000008
[2025-07-27 12:23:29] 2025-07-27 08:05:46,643 | INFO     | mean x: 1753594780.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,644 | INFO     | mean y: 2524392.2433460075
[2025-07-27 12:23:29] 2025-07-27 08:05:46,644 | INFO     | -- intersect: 5543222157.825685
[2025-07-27 12:23:29] 2025-07-27 08:05:46,644 | INFO     | intersect: 5543222157.825685
[2025-07-27 12:23:29] 2025-07-27 08:05:46,647 | INFO     | chi2: 1.9256121277299385
[2025-07-27 12:23:29] 2025-07-27 08:05:46,648 | INFO     | current chi2=1.9256121277299385 (change=0.06347758319229678 %)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,648 | INFO     | right removable region: 262
[2025-07-27 12:23:29] 2025-07-27 08:05:46,649 | INFO     | sum of square deviations: 5968658887.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,651 | INFO     | sum of deviations: -85737839868.49998
[2025-07-27 12:23:29] 2025-07-27 08:05:46,651 | INFO     | mean x: 1753595237.5
[2025-07-27 12:23:29] 2025-07-27 08:05:46,652 | INFO     | mean y: 2537688.1156716417
[2025-07-27 12:23:29] 2025-07-27 08:05:46,652 | INFO     | -- intersect: 25192361820.033634
[2025-07-27 12:23:29] 2025-07-27 08:05:46,652 | INFO     | intersect: 25192361820.033634
[2025-07-27 12:23:29] 2025-07-27 08:05:46,652 | INFO     | chi2: 1.0272645403001257
[2025-07-27 12:23:29] 2025-07-27 08:05:46,652 | INFO     | current chi2=1.0272645403001257 (change=61.94999467619379 %)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,653 | INFO     | sum of square deviations: 5640782972.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,659 | INFO     | sum of deviations: -81716930410.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,659 | INFO     | mean x: 1753595390.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,660 | INFO     | mean y: 2535800.437262357
[2025-07-27 12:23:29] 2025-07-27 08:05:46,660 | INFO     | -- intersect: 25406532579.472855
[2025-07-27 12:23:29] 2025-07-27 08:05:46,660 | INFO     | intersect: 25406532579.472855
[2025-07-27 12:23:29] 2025-07-27 08:05:46,661 | INFO     | chi2: 1.018498033017946
[2025-07-27 12:23:29] 2025-07-27 08:05:46,661 | INFO     | current chi2=1.018498033017946 (change=0.8533836162220128 %)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,661 | INFO     | left removable region: 20
[2025-07-27 12:23:29] 2025-07-27 08:05:46,662 | INFO     | sum of square deviations: 4394577280.5
[2025-07-27 12:23:29] 2025-07-27 08:05:46,667 | INFO     | sum of deviations: -46349505194.0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,667 | INFO     | mean x: 1753595359.5
[2025-07-27 12:23:29] 2025-07-27 08:05:46,668 | INFO     | mean y: 2537307.4462809917
[2025-07-27 12:23:29] 2025-07-27 08:05:46,668 | INFO     | -- intersect: 18497667108.434097
[2025-07-27 12:23:29] 2025-07-27 08:05:46,668 | INFO     | intersect: 18497667108.434097
[2025-07-27 12:23:29] 2025-07-27 08:05:46,668 | INFO     | chi2: 0.20072167520723927
[2025-07-27 12:23:29] 2025-07-27 08:05:46,668 | INFO     | -- intersect: 18497667108.434097
[2025-07-27 12:23:29] 2025-07-27 08:05:46,669 | INFO     | current memory leak: -10.55 B/s (using 242 data points, chi2=0.20)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,669 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,670 | INFO     | ..............................
[2025-07-27 12:23:29] 2025-07-27 08:05:46,670 | INFO     | . Timing measurements:
[2025-07-27 12:23:29] 2025-07-27 08:05:46,670 | INFO     | . get job = 0 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,673 | INFO     | . initial setup = 1 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,673 | INFO     | . payload setup = 12 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,674 | INFO     | . stage-in = 0 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,674 | INFO     | . payload execution = 16669 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,674 | INFO     | . stage-out = 3 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,674 | INFO     | . log creation = 1 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,674 | INFO     | ..............................
[2025-07-27 12:23:29] 2025-07-27 08:05:46,951 | INFO     | 
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | job summary report
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | --------------------------------------------------
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | PanDA job id: 6745099278
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | task id: 45743349
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | errors: (none)
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | pilot state: finished 
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | transexitcode: 0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,952 | INFO     | exeerrorcode: 0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | exeerrordiag: 
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | exitcode: 0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | exitmsg: OK
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | cpuconsumptiontime: 64007 s
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | nevents: 400
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | neventsw: 0
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | pid: 25259
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | pgrp: 25259
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | corecount: 8
[2025-07-27 12:23:29] 2025-07-27 08:05:46,953 | INFO     | event service: False
[2025-07-27 12:23:29] 2025-07-27 08:05:46,954 | INFO     | sizes: {0: 2396647, 1: 2397504, 2: 2397504, 10: 2397794, 12: 2397822, 16687: 2429009, 16688: 2429136, 16691: 2438192, 16693: 2438248, 16792: 2438442}
[2025-07-27 12:23:29] 2025-07-27 08:05:46,954 | INFO     | --------------------------------------------------
[2025-07-27 12:23:29] 2025-07-27 08:05:46,954 | INFO     | 
[2025-07-27 12:23:29] 2025-07-27 08:05:46,954 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-07-27 12:23:29] 2025-07-27 08:05:47,167 | INFO     | PID=18670 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:23:29] 2025-07-27 08:05:47,167 | INFO     | .. there are 9 such processes running
[2025-07-27 12:23:29] 2025-07-27 08:05:47,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | job 6745099278 has completed (purged errors)
[2025-07-27 12:23:29] 2025-07-27 08:05:47,384 | INFO     | overall cleanup function is called
[2025-07-27 12:23:29] 2025-07-27 08:05:48,393 | INFO     | --- collectZombieJob: --- 10, [25259]
[2025-07-27 12:23:29] 2025-07-27 08:05:48,394 | INFO     | zombie collector waiting for pid 25259
[2025-07-27 12:23:29] 2025-07-27 08:05:48,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 12:23:29] 2025-07-27 08:05:48,394 | INFO     | collected zombie processes
[2025-07-27 12:23:29] 2025-07-27 08:05:48,394 | INFO     | will attempt to kill all subprocesses of pid=25259
[2025-07-27 12:23:29] 2025-07-27 08:05:48,498 | INFO     | process IDs to be killed: [25259] (in reverse order)
[2025-07-27 12:23:29] 2025-07-27 08:05:49,498 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 12:23:29] 2025-07-27 08:05:49,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 12:23:29] 2025-07-27 08:05:49,501 | INFO     | did not find any defunct processes belonging to 25259
[2025-07-27 12:23:29] 2025-07-27 08:05:49,504 | INFO     | did not find any defunct processes belonging to 25259
[2025-07-27 12:23:29] 2025-07-27 08:05:49,505 | INFO     | ready for new job
[2025-07-27 12:23:29] 2025-07-27 08:05:49,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 12:23:29] 2025-07-27 08:05:49,507 | INFO     | ***************************************
[2025-07-27 12:23:29] 2025-07-27 08:05:49,507 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 12:23:29] 2025-07-27 08:05:49,507 | INFO     | ***************************************
[2025-07-27 12:23:29] 2025-07-27 08:05:49,507 | INFO     | 
[2025-07-27 12:23:29] 2025-07-27 08:05:49,508 | INFO     | pilot is running in a VM
[2025-07-27 12:23:29] 2025-07-27 08:05:49,508 | INFO     | architecture information:
[2025-07-27 12:23:29] 2025-07-27 08:05:49,512 | INFO     | executing command: cat /etc/os-release
[2025-07-27 12:23:29] 2025-07-27 08:05:49,671 | INFO     | cat /etc/os-release:
[2025-07-27 12:23:29] NAME="CentOS Linux"
[2025-07-27 12:23:29] VERSION="7 (Core)"
[2025-07-27 12:23:29] ID="centos"
[2025-07-27 12:23:29] ID_LIKE="rhel fedora"
[2025-07-27 12:23:29] VERSION_ID="7"
[2025-07-27 12:23:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 12:23:29] ANSI_COLOR="0;31"
[2025-07-27 12:23:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 12:23:29] HOME_URL="https://www.centos.org/"
[2025-07-27 12:23:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 12:23:29] 
[2025-07-27 12:23:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 12:23:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 12:23:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 12:23:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 12:23:29] 
[2025-07-27 12:23:29] 2025-07-27 08:05:49,671 | INFO     | ***************************************
[2025-07-27 12:23:29] 2025-07-27 08:05:50,175 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-07-27 12:23:29] 2025-07-27 08:05:50,341 | INFO     | sufficient remaining disk space (496627613696 B)
[2025-07-27 12:23:29] 2025-07-27 08:05:50,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 12:23:29] 2025-07-27 08:05:50,341 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 12:23:29] 2025-07-27 08:05:50,342 | INFO     | update_server=False
[2025-07-27 12:23:29] 2025-07-27 08:05:50,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 12:23:29] 2025-07-27 08:05:50,342 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:23:29] 2025-07-27 08:05:50,343 | INFO     | aborting loop
[2025-07-27 12:23:29] 2025-07-27 08:05:50,764 | INFO     | all job control threads have been joined
[2025-07-27 12:23:29] 2025-07-27 08:05:50,876 | INFO     | all data control threads have been joined
[2025-07-27 12:23:29] 2025-07-27 08:05:51,347 | INFO     | [job] retrieve thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,348 | INFO     | [job] job monitor thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,372 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,549 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,605 | INFO     | [data] copytool_in thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,749 | INFO     | all payload control threads have been joined
[2025-07-27 12:23:29] 2025-07-27 08:05:51,770 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 12:23:29] 2025-07-27 08:05:51,773 | INFO     | [job] control thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,802 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,824 | INFO     | [job] validate thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:51,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 12:23:29] 2025-07-27 08:05:51,881 | INFO     | [data] control thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:52,180 | INFO     | [payload] failed_post thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:52,630 | INFO     | [payload] validate_post thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:52,755 | INFO     | [payload] control thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:52,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 12:23:29] 2025-07-27 08:05:52,886 | INFO     | [job] queue monitor thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:53,777 | INFO     | [data] copytool_out thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:56,830 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 12:23:29] 2025-07-27 08:05:57,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644574422848)>', '<ExcThread(monitor, started 140644005705472)>']
[2025-07-27 12:23:29] 2025-07-27 08:06:03,024 | INFO     | all workflow threads have been joined
[2025-07-27 12:23:29] 2025-07-27 08:06:03,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 12:23:29] 2025-07-27 08:06:03,025 | INFO     | traces error code: 0
[2025-07-27 12:23:29] 2025-07-27 08:06:03,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 12:23:29] 2025-07-27 08:06:19,315 | INFO     | PID=18670 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 12:23:29] 2025-07-27 08:06:19,315 | INFO     | .. there are 9 such processes running
[2025-07-27 12:23:29] 2025-07-27 08:06:19,317 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 12:23:29] 2025-07-27 08:06:19,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 12:23:29] 2025-07-27 08:06:19,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 12:23:29] 2025-07-27 08:06:19,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 12:23:29] 2025-07-27 08:06:19,317 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 12:23:29] 2025-07-27 08:06:19,317 | INFO     | [monitor] control thread has ended
[2025-07-27 12:23:29] 2025-07-27 08:06:19,679 [wrapper] ==== pilot stdout END ====
[2025-07-27 12:23:29] 2025-07-27 08:06:19,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 12:23:29] 2025-07-27 08:06:19,822 [wrapper] pilotpid: 18670
[2025-07-27 12:23:29] 2025-07-27 08:06:19,913 [wrapper] Pilot exit status: 0
[2025-07-27 12:23:29] 2025-07-27 08:06:20,307 [wrapper] pandaids: 6745099278
[2025-07-27 12:23:29] 2025-07-27 08:06:20,630 [wrapper] cleanup supervisor_pilot 20536 18671
[2025-07-27 12:23:29] 2025-07-27 08:06:20,688 [wrapper] Test setup, not cleaning
[2025-07-27 12:23:29] 2025-07-27 08:06:20,794 [wrapper] apfmon messages muted
[2025-07-27 12:23:29] 2025-07-27 08:06:20,899 [wrapper] ==== wrapper stdout END ====
[2025-07-27 12:23:29] 2025-07-27 08:06:20,977 [wrapper] ==== wrapper stderr END ====
[2025-07-27 12:23:29]  *** Error codes and diagnostics ***
[2025-07-27 12:23:29]     "exeErrorCode": 0,
[2025-07-27 12:23:29]     "exeErrorDiag": "",
[2025-07-27 12:23:29]     "pilotErrorCode": 0,
[2025-07-27 12:23:29]     "pilotErrorDiag": "",
[2025-07-27 12:23:29]  *** Listing of results directory ***
[2025-07-27 12:23:29] total 356396
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc    530466 Jul 26 09:16 pilot3.tar.gz
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc      5112 Jul 26 09:19 queuedata.json
[2025-07-27 12:23:29] -rwx------. 1 boinc boinc     36292 Jul 26 09:19 runpilot2-wrapper.sh
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc       100 Jul 27 05:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 12:23:29] -rwxr-xr-x. 1 boinc boinc      7986 Jul 27 05:25 run_atlas
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc       105 Jul 27 05:25 job.xml
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc      6391 Jul 27 05:25 init_data.xml
[2025-07-27 12:23:29] -rw-r--r--. 2 boinc boinc 146715161 Jul 27 05:25 EVNT.45743347._001927.pool.root.1
[2025-07-27 12:23:29] -rw-r--r--. 2 boinc boinc     15095 Jul 27 05:25 start_atlas.sh
[2025-07-27 12:23:29] drwxrwx--x. 2 boinc boinc        68 Jul 27 05:25 shared
[2025-07-27 12:23:29] -rw-r--r--. 2 boinc boinc    542894 Jul 27 05:25 input.tar.gz
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc         0 Jul 27 05:25 boinc_lockfile
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc      2563 Jul 27 05:25 pandaJob.out
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc    980125 Jul 27 05:25 agis_schedconf.cvmfs.json
[2025-07-27 12:23:29] drwx------. 4 boinc boinc      4096 Jul 27 05:25 pilot3
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc 210659481 Jul 27 10:02 HITS.45743349._034097.pool.root.1
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc       531 Jul 27 10:02 boinc_task_state.xml
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc      1018 Jul 27 10:03 memory_monitor_summary.json
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc   1593052 Jul 27 10:04 agis_ddmendpoints.agis.ALL.json
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc    411760 Jul 27 10:04 log.45743349._034097.job.log.tgz.1
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc      7782 Jul 27 10:05 heartbeat.json
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc        95 Jul 27 10:06 pilot_heartbeat.json
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc       890 Jul 27 10:06 pilotlog.txt
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc   1442257 Jul 27 10:06 log.45743349._034097.job.log.1
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc       357 Jul 27 10:06 output.list
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc       620 Jul 27 10:06 runtime_log
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc   1873920 Jul 27 10:06 result.tar.gz
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc      8674 Jul 27 10:06 runtime_log.err
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc       657 Jul 27 10:06 BWrLDmrMoz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2WRLDm2VDRWn.diag
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc      8192 Jul 27 12:23 boinc_mmap_file
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc        28 Jul 27 12:23 wrapper_checkpoint.txt
[2025-07-27 12:23:29] -rw-r--r--. 1 boinc boinc     20658 Jul 27 12:23 stderr.txt
[2025-07-27 12:23:29] HITS file was successfully produced:
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc 210659481 Jul 27 10:02 shared/HITS.pool.root.1
[2025-07-27 12:23:29]  *** Contents of shared directory: ***
[2025-07-27 12:23:29] total 351384
[2025-07-27 12:23:29] -rw-r--r--. 2 boinc boinc 146715161 Jul 27 05:25 ATLAS.root_0
[2025-07-27 12:23:29] -rw-r--r--. 2 boinc boinc     15095 Jul 27 05:25 start_atlas.sh
[2025-07-27 12:23:29] -rw-r--r--. 2 boinc boinc    542894 Jul 27 05:25 input.tar.gz
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc 210659481 Jul 27 10:02 HITS.pool.root.1
[2025-07-27 12:23:29] -rw-------. 1 boinc boinc   1873920 Jul 27 10:06 result.tar.gz
12:23:31 (14659): run_atlas exited; CPU time 64222.963634
12:23:31 (14659): called boinc_finish(0)

</stderr_txt>
]]>

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