Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:19 (3699607): wrapper (7.7.26015): starting
10:16:19 (3699607): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 10:16:19] Arguments: --nthreads 12
[2025-07-26 10:16:19] Threads: 12
[2025-07-26 10:16:19] Checking for CVMFS
[2025-07-26 10:16:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:16:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:16:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:16:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:16:20] 2.12.6.0 18753 17050 297724 148779 0 66 17993284 32935937 9078 16776704 0 30565895 99.639 68387907 27659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 10:16:20] CVMFS is ok
[2025-07-26 10:16:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:16:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:16:20] Further information can be found at the LHC@home message board.
[2025-07-26 10:16:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:16:20] Checking for apptainer binary...
[2025-07-26 10:16:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:16:20] Running /usr/bin/apptainer --version
[2025-07-26 10:16:20] apptainer version 1.4.1-1.el9
[2025-07-26 10:16:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:16:20] c6-1-24-4.aglt2.org
[2025-07-26 10:16:20] apptainer works
[2025-07-26 10:16:20] Set ATHENA_PROC_NUMBER=12
[2025-07-26 10:16:20] Set ATHENA_CORE_NUMBER=12
[2025-07-26 10:16:20] Starting ATLAS job with PandaID=6745099054
[2025-07-26 10:16:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 11:33:41]  *** The last 200 lines of the pilot log: ***
[2025-07-26 11:33:41]  mtime=0
[2025-07-26 11:33:41]  protocol_id=None
[2025-07-26 11:33:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 11:33:41]  replicas=None
[2025-07-26 11:33:41]  scope=mc23_13p6TeV
[2025-07-26 11:33:41]  status=None
[2025-07-26 11:33:41]  status_code=0
[2025-07-26 11:33:41]  storage_token=
[2025-07-26 11:33:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745099054/log.45743349._034014.job.log.tgz.1
[2025-07-26 11:33:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/c9/log.45743349._034014.job.log.tgz.1
[2025-07-26 11:33:41]  workdir=None
[2025-07-26 11:33:41] ]
[2025-07-26 11:33:41] 2025-07-26 15:33:01,287 | INFO     | transferring file log.45743349._034014.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745099054/log.45743349._034014.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 11:33:41] 2025-07-26 15:33:01,287 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745099054/log.45743349._034014.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._034014.job
[2025-07-26 11:33:41] 2025-07-26 15:33:01,307 | INFO     | adding to output.list: log.45743349._034014.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/c9/log.45743349._034014.job.log.tg
[2025-07-26 11:33:41] 2025-07-26 15:33:01,308 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 11:33:41] 2025-07-26 15:33:01,308 | INFO     | summary of transferred files:
[2025-07-26 11:33:41] 2025-07-26 15:33:01,308 | INFO     |  -- lfn=log.45743349._034014.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 11:33:41] 2025-07-26 15:33:01,309 | INFO     | stage-out finished correctly
[2025-07-26 11:33:41] 2025-07-26 15:33:01,390 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 11:33:41] 2025-07-26 15:33:02,303 | INFO     | monitor loop #340: job 0:6745099054 is in state 'finished'
[2025-07-26 11:33:41] 2025-07-26 15:33:02,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:33:41] 2025-07-26 15:33:04,453 | INFO     | job 6745099054 has state=finished
[2025-07-26 11:33:41] 2025-07-26 15:33:04,453 | INFO     | preparing for final server update for job 6745099054 in state='finished'
[2025-07-26 11:33:41] 2025-07-26 15:33:04,512 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 11:33:41] 2025-07-26 15:33:04,512 | INFO     | this job has now completed (state=finished)
[2025-07-26 11:33:41] 2025-07-26 15:33:04,513 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 11:33:41] 2025-07-26 15:33:04,513 | INFO     | log transfer has been attempted: DONE
[2025-07-26 11:33:41] 2025-07-26 15:33:04,513 | INFO     | job 6745099054 has finished - writing final server update
[2025-07-26 11:33:41] 2025-07-26 15:33:04,513 | INFO     | total number of processed events: 400 (read)
[2025-07-26 11:33:41] 2025-07-26 15:33:04,514 | INFO     | executing command: lscpu
[2025-07-26 11:33:41] 2025-07-26 15:33:04,585 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 11:33:41] 2025-07-26 15:33:04,806 | INFO     | monitor loop #341: job 0:6745099054 is in state 'finished'
[2025-07-26 11:33:41] 2025-07-26 15:33:04,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:33:41] 2025-07-26 15:33:07,309 | INFO     | monitor loop #342: job 0:6745099054 is in state 'finished'
[2025-07-26 11:33:41] 2025-07-26 15:33:07,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 11:33:41] 2025-07-26 15:33:08,874 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 11:33:41] 2025-07-26 15:33:08,878 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2547.4447142857143
[2025-07-26 11:33:41] 2025-07-26 15:33:08,889 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745099054/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 11:33:41] 2025-07-26 15:33:08,890 | INFO     | extracted standard info from prmon json
[2025-07-26 11:33:41] 2025-07-26 15:33:08,890 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 11:33:41] 2025-07-26 15:33:08,890 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 11:33:41] 2025-07-26 15:33:08,890 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 11:33:41] 2025-07-26 15:33:08,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 11:33:41] 2025-07-26 15:33:08,893 | INFO     | fitting pss+swap vs Time
[2025-07-26 11:33:41] 2025-07-26 15:33:08,893 | INFO     | sum of square deviations: 97479037.0
[2025-07-26 11:33:41] 2025-07-26 15:33:08,894 | INFO     | sum of deviations: -7877194465.500001
[2025-07-26 11:33:41] 2025-07-26 15:33:08,894 | INFO     | mean x: 1753541776.5
[2025-07-26 11:33:41] 2025-07-26 15:33:08,894 | INFO     | mean y: 2709283.220588235
[2025-07-26 11:33:41] 2025-07-26 15:33:08,894 | INFO     | -- intersect: 141704863941.03528
[2025-07-26 11:33:41] 2025-07-26 15:33:08,894 | INFO     | intersect: 141704863941.03528
[2025-07-26 11:33:41] 2025-07-26 15:33:08,894 | INFO     | chi2: 0.17635637976315363
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | -- intersect: 141704863941.03528
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | current memory leak: -80.81 B/s (using 68 data points, chi2=0.18)
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | could have reported an average CPU frequency of 2618 MHz (6 samples)
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | ..............................
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | . Timing measurements:
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | . get job = 0 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,895 | INFO     | . initial setup = 4 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,896 | INFO     | . payload setup = 9 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,896 | INFO     | . stage-in = 0 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,896 | INFO     | . payload execution = 4554 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,896 | INFO     | . stage-out = 0 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,896 | INFO     | . log creation = 0 s
[2025-07-26 11:33:41] 2025-07-26 15:33:08,896 | INFO     | ..............................
[2025-07-26 11:33:41] 2025-07-26 15:33:09,232 | INFO     | 
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | job summary report
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | --------------------------------------------------
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | PanDA job id: 6745099054
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | task id: 45743349
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | errors: (none)
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | pilot state: finished 
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | transexitcode: 0
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | exeerrorcode: 0
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | exeerrordiag: 
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | exitcode: 0
[2025-07-26 11:33:41] 2025-07-26 15:33:09,233 | INFO     | exitmsg: OK
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | cpuconsumptiontime: 49319 s
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | nevents: 400
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | neventsw: 0
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | pid: 3710379
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | pgrp: 3710379
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | corecount: 12
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | event service: False
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | sizes: {0: 2397247, 1: 2397502, 7: 2397764, 12: 2397792, 4567: 2423839, 4569: 2433021, 4576: 2433159}
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | --------------------------------------------------
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | 
[2025-07-26 11:33:41] 2025-07-26 15:33:09,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 11:33:41] 2025-07-26 15:33:09,256 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | job 6745099054 has completed (purged errors)
[2025-07-26 11:33:41] 2025-07-26 15:33:09,258 | INFO     | overall cleanup function is called
[2025-07-26 11:33:41] 2025-07-26 15:33:10,265 | INFO     | --- collectZombieJob: --- 10, [3710379]
[2025-07-26 11:33:41] 2025-07-26 15:33:10,266 | INFO     | zombie collector waiting for pid 3710379
[2025-07-26 11:33:41] 2025-07-26 15:33:10,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 11:33:41] 2025-07-26 15:33:10,266 | INFO     | collected zombie processes
[2025-07-26 11:33:41] 2025-07-26 15:33:10,266 | INFO     | will attempt to kill all subprocesses of pid=3710379
[2025-07-26 11:33:41] 2025-07-26 15:33:10,505 | INFO     | process IDs to be killed: [3710379] (in reverse order)
[2025-07-26 11:33:41] 2025-07-26 15:33:10,600 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 11:33:41] 2025-07-26 15:33:10,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 11:33:41] 2025-07-26 15:33:10,611 | INFO     | did not find any defunct processes belonging to 3710379
[2025-07-26 11:33:41] 2025-07-26 15:33:10,620 | INFO     | did not find any defunct processes belonging to 3710379
[2025-07-26 11:33:41] 2025-07-26 15:33:10,621 | INFO     | ready for new job
[2025-07-26 11:33:41] 2025-07-26 15:33:10,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 11:33:41] 2025-07-26 15:33:10,622 | INFO     | ***************************************
[2025-07-26 11:33:41] 2025-07-26 15:33:10,623 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 11:33:41] 2025-07-26 15:33:10,623 | INFO     | ***************************************
[2025-07-26 11:33:41] 2025-07-26 15:33:10,623 | INFO     | 
[2025-07-26 11:33:41] 2025-07-26 15:33:10,626 | INFO     | architecture information:
[2025-07-26 11:33:41] 2025-07-26 15:33:10,627 | INFO     | executing command: cat /etc/os-release
[2025-07-26 11:33:41] 2025-07-26 15:33:10,642 | INFO     | cat /etc/os-release:
[2025-07-26 11:33:41] NAME="CentOS Linux"
[2025-07-26 11:33:41] VERSION="7 (Core)"
[2025-07-26 11:33:41] ID="centos"
[2025-07-26 11:33:41] ID_LIKE="rhel fedora"
[2025-07-26 11:33:41] VERSION_ID="7"
[2025-07-26 11:33:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 11:33:41] ANSI_COLOR="0;31"
[2025-07-26 11:33:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 11:33:41] HOME_URL="https://www.centos.org/"
[2025-07-26 11:33:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 11:33:41] 
[2025-07-26 11:33:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 11:33:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 11:33:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 11:33:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 11:33:41] 
[2025-07-26 11:33:41] 2025-07-26 15:33:10,643 | INFO     | ***************************************
[2025-07-26 11:33:41] 2025-07-26 15:33:11,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 11:33:41] 2025-07-26 15:33:11,165 | INFO     | sufficient remaining disk space (76530319360 B)
[2025-07-26 11:33:41] 2025-07-26 15:33:11,166 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 11:33:41] 2025-07-26 15:33:11,166 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 11:33:41] 2025-07-26 15:33:11,166 | INFO     | update_server=False
[2025-07-26 11:33:41] 2025-07-26 15:33:11,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 11:33:41] 2025-07-26 15:33:11,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:33:41] 2025-07-26 15:33:11,167 | INFO     | aborting loop
[2025-07-26 11:33:41] 2025-07-26 15:33:11,262 | INFO     | all job control threads have been joined
[2025-07-26 11:33:41] 2025-07-26 15:33:11,461 | INFO     | all payload control threads have been joined
[2025-07-26 11:33:41] 2025-07-26 15:33:11,863 | INFO     | all data control threads have been joined
[2025-07-26 11:33:41] 2025-07-26 15:33:11,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 11:33:41] 2025-07-26 15:33:11,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 11:33:41] 2025-07-26 15:33:12,171 | INFO     | [job] retrieve thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,172 | INFO     | [job] job monitor thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,228 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,229 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,267 | INFO     | [job] control thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,467 | INFO     | [payload] control thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,475 | INFO     | [payload] validate_post thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,868 | INFO     | [data] control thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:12,973 | INFO     | [job] validate thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:13,177 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:13,431 | INFO     | [data] copytool_in thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:13,550 | INFO     | [payload] failed_post thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:13,912 | INFO     | [data] copytool_out thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:14,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:33:41] 2025-07-26 15:33:15,041 | INFO     | [job] queue monitor thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:15,999 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:21,944 | INFO     | job.realtimelogging is not enabled
[2025-07-26 11:33:41] 2025-07-26 15:33:22,949 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 11:33:41] 2025-07-26 15:33:23,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710787630912)>', '<ExcThread(monitor, started 140710149867264)>']
[2025-07-26 11:33:41] 2025-07-26 15:33:28,837 | INFO     | all workflow threads have been joined
[2025-07-26 11:33:41] 2025-07-26 15:33:28,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 11:33:41] 2025-07-26 15:33:28,838 | INFO     | traces error code: 0
[2025-07-26 11:33:41] 2025-07-26 15:33:28,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 11:33:41] 2025-07-26 15:33:40,999 | INFO     | PID=3703193 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 11:33:41] 2025-07-26 15:33:41,000 | INFO     | .. there are 9 such processes running
[2025-07-26 11:33:41] 2025-07-26 15:33:41,001 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 11:33:41] 2025-07-26 15:33:41,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 11:33:41] 2025-07-26 15:33:41,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 11:33:41] 2025-07-26 15:33:41,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 11:33:41] 2025-07-26 15:33:41,001 | INFO     | [monitor] control thread has ended
[2025-07-26 11:33:41] 2025-07-26 15:33:41,152 [wrapper] ==== pilot stdout END ====
[2025-07-26 11:33:41] 2025-07-26 15:33:41,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 11:33:41] 2025-07-26 15:33:41,157 [wrapper] pilotpid: 3703193
[2025-07-26 11:33:41] 2025-07-26 15:33:41,159 [wrapper] Pilot exit status: 0
[2025-07-26 11:33:41] 2025-07-26 15:33:41,169 [wrapper] pandaids: 6745099054
[2025-07-26 11:33:41] 2025-07-26 15:33:41,221 [wrapper] cleanup supervisor_pilot 3874743 3703194
[2025-07-26 11:33:41] 2025-07-26 15:33:41,224 [wrapper] Test setup, not cleaning
[2025-07-26 11:33:41] 2025-07-26 15:33:41,226 [wrapper] apfmon messages muted
[2025-07-26 11:33:41] 2025-07-26 15:33:41,228 [wrapper] ==== wrapper stdout END ====
[2025-07-26 11:33:41] 2025-07-26 15:33:41,231 [wrapper] ==== wrapper stderr END ====
[2025-07-26 11:33:41]  *** Error codes and diagnostics ***
[2025-07-26 11:33:41]     "exeErrorCode": 0,
[2025-07-26 11:33:41]     "exeErrorDiag": "",
[2025-07-26 11:33:41]     "pilotErrorCode": 0,
[2025-07-26 11:33:41]     "pilotErrorDiag": "",
[2025-07-26 11:33:41]  *** Listing of results directory ***
[2025-07-26 11:33:41] total 351748
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 02:56 pilot3.tar.gz
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 03:11 queuedata.json
[2025-07-26 11:33:41] -rwx------. 1 boincer umatlas     36292 Jul 26 03:12 runpilot2-wrapper.sh
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas       100 Jul 26 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 11:33:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 10:16 run_atlas
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas       105 Jul 26 10:16 job.xml
[2025-07-26 11:33:41] -rw-r--r--. 2 boincer umatlas 147357160 Jul 26 10:16 EVNT.45743347._001922.pool.root.1
[2025-07-26 11:33:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:16 start_atlas.sh
[2025-07-26 11:33:41] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 10:16 shared
[2025-07-26 11:33:41] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 10:16 input.tar.gz
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas         0 Jul 26 10:16 boinc_lockfile
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 10:16 pandaJob.out
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas    980133 Jul 26 10:16 agis_schedconf.cvmfs.json
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas   1593052 Jul 26 10:16 agis_ddmendpoints.agis.ALL.json
[2025-07-26 11:33:41] drwx------. 4 boincer umatlas      4096 Jul 26 10:16 pilot3
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 11:30 init_data.xml
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas 207325598 Jul 26 11:32 HITS.45743349._034014.pool.root.1
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas       529 Jul 26 11:32 boinc_task_state.xml
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas      1036 Jul 26 11:32 memory_monitor_summary.json
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas    360442 Jul 26 11:33 log.45743349._034014.job.log.tgz.1
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas      7823 Jul 26 11:33 heartbeat.json
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 11:33 boinc_mmap_file
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas        27 Jul 26 11:33 wrapper_checkpoint.txt
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas       822 Jul 26 11:33 pilotlog.txt
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas        95 Jul 26 11:33 pilot_heartbeat.json
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas    455754 Jul 26 11:33 log.45743349._034014.job.log.1
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas       357 Jul 26 11:33 output.list
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas       620 Jul 26 11:33 runtime_log
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas    839680 Jul 26 11:33 result.tar.gz
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas       655 Jul 26 11:33 ZNlLDmYGoz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyVRLDmZZAmum.diag
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 11:33 runtime_log.err
[2025-07-26 11:33:41] -rw-r--r--. 1 boincer umatlas     21719 Jul 26 11:33 stderr.txt
[2025-07-26 11:33:41] HITS file was successfully produced:
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas 207325598 Jul 26 11:32 shared/HITS.pool.root.1
[2025-07-26 11:33:41]  *** Contents of shared directory: ***
[2025-07-26 11:33:41] total 347744
[2025-07-26 11:33:41] -rw-r--r--. 2 boincer umatlas 147357160 Jul 26 10:16 ATLAS.root_0
[2025-07-26 11:33:41] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:16 start_atlas.sh
[2025-07-26 11:33:41] -rw-r--r--. 2 boincer umatlas    542893 Jul 26 10:16 input.tar.gz
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas 207325598 Jul 26 11:32 HITS.pool.root.1
[2025-07-26 11:33:41] -rw-------. 1 boincer umatlas    839680 Jul 26 11:33 result.tar.gz
11:33:42 (3699607): run_atlas exited; CPU time 49337.558322
11:33:42 (3699607): called boinc_finish(0)

</stderr_txt>
]]>

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