Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:43:02 (17839): wrapper (7.7.26015): starting
08:43:02 (17839): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 08:43:02] Arguments: --nthreads 10
[2025-07-26 08:43:02] Threads: 10
[2025-07-26 08:43:02] Checking for CVMFS
[2025-07-26 08:43:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 08:43:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 08:43:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 08:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 08:43:04] 2.11.2.0 5567 4829 167312 148777 3 495 15957127 18432001 7552 130560 0 31085438 99.657 19607549 28470 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 08:43:04] CVMFS is ok
[2025-07-26 08:43:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 08:43:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 08:43:04] Further information can be found at the LHC@home message board.
[2025-07-26 08:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 08:43:04] Checking for apptainer binary...
[2025-07-26 08:43:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 08:43:04] Running /usr/bin/apptainer --version
[2025-07-26 08:43:05] apptainer version 1.3.2-1.el7
[2025-07-26 08:43:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 08:43:15] c-210-1.aglt2.org
[2025-07-26 08:43:15] apptainer works
[2025-07-26 08:43:15] Set ATHENA_PROC_NUMBER=10
[2025-07-26 08:43:15] Set ATHENA_CORE_NUMBER=10
[2025-07-26 08:43:15] Starting ATLAS job with PandaID=6745098926
[2025-07-26 08:43:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:49:22]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:49:22] 2025-07-26 16:48:43,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:49:22] 2025-07-26 16:48:43,171 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:49:22] 2025-07-26 16:48:43,179 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:49:22] 2025-07-26 16:48:43,180 | INFO     | sum of square deviations: 4024198229.846801
[2025-07-26 12:49:22] 2025-07-26 16:48:43,182 | INFO     | sum of deviations: 72155080924.48938
[2025-07-26 12:49:22] 2025-07-26 16:48:43,182 | INFO     | mean x: 1753541253.174468
[2025-07-26 12:49:22] 2025-07-26 16:48:43,183 | INFO     | mean y: 2525822.914893617
[2025-07-26 12:49:22] 2025-07-26 16:48:43,184 | INFO     | -- intersect: -31438994649.114902
[2025-07-26 12:49:22] 2025-07-26 16:48:43,184 | INFO     | intersect: -31438994649.114902
[2025-07-26 12:49:22] 2025-07-26 16:48:43,185 | INFO     | chi2: 5.112689743147264
[2025-07-26 12:49:22] 2025-07-26 16:48:43,186 | INFO     | sum of square deviations: 3772759126.5434885
[2025-07-26 12:49:22] 2025-07-26 16:48:43,187 | INFO     | sum of deviations: 86517786524.97829
[2025-07-26 12:49:22] 2025-07-26 16:48:43,188 | INFO     | mean x: 1753541100.673913
[2025-07-26 12:49:22] 2025-07-26 16:48:43,188 | INFO     | mean y: 2534365.013043478
[2025-07-26 12:49:22] 2025-07-26 16:48:43,188 | INFO     | -- intersect: -40210076491.454865
[2025-07-26 12:49:22] 2025-07-26 16:48:43,188 | INFO     | intersect: -40210076491.454865
[2025-07-26 12:49:22] 2025-07-26 16:48:43,189 | INFO     | chi2: 4.366997932006851
[2025-07-26 12:49:22] 2025-07-26 16:48:43,189 | INFO     | current chi2=4.366997932006851 (change=14.585117591770416 %)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,189 | INFO     | right removable region: 229
[2025-07-26 12:49:22] 2025-07-26 16:48:43,189 | INFO     | sum of square deviations: 3772748452.191303
[2025-07-26 12:49:22] 2025-07-26 16:48:43,193 | INFO     | sum of deviations: -3389774634.026087
[2025-07-26 12:49:22] 2025-07-26 16:48:43,195 | INFO     | mean x: 1753541405.6782608
[2025-07-26 12:49:22] 2025-07-26 16:48:43,195 | INFO     | mean y: 2571556.6347826086
[2025-07-26 12:49:22] 2025-07-26 16:48:43,195 | INFO     | -- intersect: 1578109987.5710232
[2025-07-26 12:49:22] 2025-07-26 16:48:43,195 | INFO     | intersect: 1578109987.5710232
[2025-07-26 12:49:22] 2025-07-26 16:48:43,196 | INFO     | chi2: 1.304425702443464
[2025-07-26 12:49:22] 2025-07-26 16:48:43,196 | INFO     | current chi2=1.304425702443464 (change=74.48650772928602 %)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,197 | INFO     | sum of square deviations: 3531996549.528878
[2025-07-26 12:49:22] 2025-07-26 16:48:43,199 | INFO     | sum of deviations: -25025495243.773342
[2025-07-26 12:49:22] 2025-07-26 16:48:43,199 | INFO     | mean x: 1753541558.1822221
[2025-07-26 12:49:22] 2025-07-26 16:48:43,199 | INFO     | mean y: 2585191.506666667
[2025-07-26 12:49:22] 2025-07-26 16:48:43,199 | INFO     | -- intersect: 12427072392.634182
[2025-07-26 12:49:22] 2025-07-26 16:48:43,201 | INFO     | intersect: 12427072392.634182
[2025-07-26 12:49:22] 2025-07-26 16:48:43,202 | INFO     | chi2: 0.9326216914723666
[2025-07-26 12:49:22] 2025-07-26 16:48:43,202 | INFO     | current chi2=0.9326216914723666 (change=28.503272380682947 %)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,202 | INFO     | sum of square deviations: 3301709959.359083
[2025-07-26 12:49:22] 2025-07-26 16:48:43,204 | INFO     | sum of deviations: -27233409135.636356
[2025-07-26 12:49:22] 2025-07-26 16:48:43,204 | INFO     | mean x: 1753541710.6863637
[2025-07-26 12:49:22] 2025-07-26 16:48:43,205 | INFO     | mean y: 2586607.4545454546
[2025-07-26 12:49:22] 2025-07-26 16:48:43,206 | INFO     | -- intersect: 14466279491.246023
[2025-07-26 12:49:22] 2025-07-26 16:48:43,206 | INFO     | intersect: 14466279491.246023
[2025-07-26 12:49:22] 2025-07-26 16:48:43,207 | INFO     | chi2: 0.9036110037731084
[2025-07-26 12:49:22] 2025-07-26 16:48:43,207 | INFO     | current chi2=0.9036110037731084 (change=3.1106597631734116 %)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,207 | INFO     | left removable region: 30
[2025-07-26 12:49:22] 2025-07-26 16:48:43,208 | INFO     | sum of square deviations: 2443645765.527621
[2025-07-26 12:49:22] 2025-07-26 16:48:43,209 | INFO     | sum of deviations: 8811769201.703516
[2025-07-26 12:49:22] 2025-07-26 16:48:43,212 | INFO     | mean x: 1753541985.1658292
[2025-07-26 12:49:22] 2025-07-26 16:48:43,212 | INFO     | mean y: 2581312.2211055276
[2025-07-26 12:49:22] 2025-07-26 16:48:43,212 | INFO     | -- intersect: -6320678579.517751
[2025-07-26 12:49:22] 2025-07-26 16:48:43,212 | INFO     | intersect: -6320678579.517751
[2025-07-26 12:49:22] 2025-07-26 16:48:43,213 | INFO     | chi2: 0.0014233696796851795
[2025-07-26 12:49:22] 2025-07-26 16:48:43,213 | INFO     | -- intersect: -6320678579.517751
[2025-07-26 12:49:22] 2025-07-26 16:48:43,213 | INFO     | current memory leak: 3.61 B/s (using 199 data points, chi2=0.00)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,215 | INFO     | could have reported an average CPU frequency of 2598 MHz (11 samples)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | ..............................
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | . Timing measurements:
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | . get job = 0 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | . initial setup = 6 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | . payload setup = 79 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | . stage-in = 0 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,216 | INFO     | . payload execution = 14393 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,217 | INFO     | . stage-out = 5 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,217 | INFO     | . log creation = 1 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,217 | INFO     | ..............................
[2025-07-26 12:49:22] 2025-07-26 16:48:43,479 | INFO     | 
[2025-07-26 12:49:22] 2025-07-26 16:48:43,479 | INFO     | job summary report
[2025-07-26 12:49:22] 2025-07-26 16:48:43,479 | INFO     | --------------------------------------------------
[2025-07-26 12:49:22] 2025-07-26 16:48:43,479 | INFO     | PanDA job id: 6745098926
[2025-07-26 12:49:22] 2025-07-26 16:48:43,479 | INFO     | task id: 45743349
[2025-07-26 12:49:22] 2025-07-26 16:48:43,479 | INFO     | errors: (none)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | pilot state: finished 
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | transexitcode: 0
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | exeerrorcode: 0
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | exeerrordiag: 
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | exitcode: 0
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | exitmsg: OK
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | cpuconsumptiontime: 62090 s
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | nevents: 400
[2025-07-26 12:49:22] 2025-07-26 16:48:43,480 | INFO     | neventsw: 0
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | pid: 40085
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | pgrp: 40085
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | corecount: 10
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | event service: False
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | sizes: {0: 2396641, 1: 2397326, 2: 2397525, 13: 2397525, 24: 2397581, 35: 2397609, 44: 2398027, 45: 2398055, 14479: 2428985, 14480: 2428984, 14487: 2438038, 14489:
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | --------------------------------------------------
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | 
[2025-07-26 12:49:22] 2025-07-26 16:48:43,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 12:49:22] 2025-07-26 16:48:43,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:49:22] 2025-07-26 16:48:43,902 | INFO     | job 6745098926 has completed (purged errors)
[2025-07-26 12:49:22] 2025-07-26 16:48:43,902 | INFO     | overall cleanup function is called
[2025-07-26 12:49:22] 2025-07-26 16:48:44,956 | INFO     | --- collectZombieJob: --- 10, [40085]
[2025-07-26 12:49:22] 2025-07-26 16:48:44,956 | INFO     | zombie collector waiting for pid 40085
[2025-07-26 12:49:22] 2025-07-26 16:48:44,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:49:22] 2025-07-26 16:48:44,956 | INFO     | collected zombie processes
[2025-07-26 12:49:22] 2025-07-26 16:48:44,956 | INFO     | will attempt to kill all subprocesses of pid=40085
[2025-07-26 12:49:22] 2025-07-26 16:48:46,584 | INFO     | PID=35680 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 12:49:22] 2025-07-26 16:48:46,591 | INFO     | .. there are 14 such processes running
[2025-07-26 12:49:22] 2025-07-26 16:48:46,597 | INFO     | process IDs to be killed: [40085] (in reverse order)
[2025-07-26 12:49:22] 2025-07-26 16:48:46,760 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:49:22] 2025-07-26 16:48:46,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:49:22] 2025-07-26 16:48:46,773 | INFO     | did not find any defunct processes belonging to 40085
[2025-07-26 12:49:22] 2025-07-26 16:48:46,784 | INFO     | did not find any defunct processes belonging to 40085
[2025-07-26 12:49:22] 2025-07-26 16:48:46,785 | INFO     | ready for new job
[2025-07-26 12:49:22] 2025-07-26 16:48:46,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:49:22] 2025-07-26 16:48:46,789 | INFO     | ***************************************
[2025-07-26 12:49:22] 2025-07-26 16:48:46,789 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:49:22] 2025-07-26 16:48:46,789 | INFO     | ***************************************
[2025-07-26 12:49:22] 2025-07-26 16:48:46,789 | INFO     | 
[2025-07-26 12:49:22] 2025-07-26 16:48:46,793 | INFO     | architecture information:
[2025-07-26 12:49:22] 2025-07-26 16:48:46,798 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:49:22] 2025-07-26 16:48:47,015 | INFO     | cat /etc/os-release:
[2025-07-26 12:49:22] NAME="CentOS Linux"
[2025-07-26 12:49:22] VERSION="7 (Core)"
[2025-07-26 12:49:22] ID="centos"
[2025-07-26 12:49:22] ID_LIKE="rhel fedora"
[2025-07-26 12:49:22] VERSION_ID="7"
[2025-07-26 12:49:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:49:22] ANSI_COLOR="0;31"
[2025-07-26 12:49:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:49:22] HOME_URL="https://www.centos.org/"
[2025-07-26 12:49:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:49:22] 
[2025-07-26 12:49:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:49:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:49:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:49:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:49:22] 
[2025-07-26 12:49:22] 2025-07-26 16:48:47,015 | INFO     | ***************************************
[2025-07-26 12:49:22] 2025-07-26 16:48:47,519 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 12:49:22] 2025-07-26 16:48:47,645 | INFO     | sufficient remaining disk space (57361301504 B)
[2025-07-26 12:49:22] 2025-07-26 16:48:47,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:49:22] 2025-07-26 16:48:47,647 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:49:22] 2025-07-26 16:48:47,647 | INFO     | update_server=False
[2025-07-26 12:49:22] 2025-07-26 16:48:47,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:49:22] 2025-07-26 16:48:47,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:49:22] 2025-07-26 16:48:47,652 | INFO     | aborting loop
[2025-07-26 12:49:22] 2025-07-26 16:48:47,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:49:22] 2025-07-26 16:48:47,697 | INFO     | all data control threads have been joined
[2025-07-26 12:49:22] 2025-07-26 16:48:48,306 | INFO     | all payload control threads have been joined
[2025-07-26 12:49:22] 2025-07-26 16:48:48,408 | INFO     | all job control threads have been joined
[2025-07-26 12:49:22] 2025-07-26 16:48:48,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:49:22] 2025-07-26 16:48:48,658 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:48,661 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:48,705 | INFO     | [data] control thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:48,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:49:22] 2025-07-26 16:48:48,861 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:48,976 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,311 | INFO     | [payload] control thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,416 | INFO     | [job] control thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,492 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,556 | INFO     | [job] validate thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,561 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,659 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,686 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,903 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,918 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:49,930 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:52,804 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:49:22] 2025-07-26 16:48:54,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127482455872)>', '<ExcThread(monitor, started 140127032555264)>']
[2025-07-26 12:49:22] 2025-07-26 16:48:59,063 | INFO     | all workflow threads have been joined
[2025-07-26 12:49:22] 2025-07-26 16:48:59,063 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:49:22] 2025-07-26 16:48:59,063 | INFO     | traces error code: 0
[2025-07-26 12:49:22] 2025-07-26 16:48:59,064 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:49:22] 2025-07-26 16:49:19,874 | INFO     | PID=35680 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 12:49:22] 2025-07-26 16:49:19,874 | INFO     | .. there are 14 such processes running
[2025-07-26 12:49:22] 2025-07-26 16:49:19,875 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:49:22] 2025-07-26 16:49:19,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:49:22] 2025-07-26 16:49:19,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:49:22] 2025-07-26 16:49:19,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:49:22] 2025-07-26 16:49:19,876 | INFO     | [monitor] control thread has ended
[2025-07-26 12:49:22] 2025-07-26 16:49:20,299 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:49:22] 2025-07-26 16:49:20,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:49:22] 2025-07-26 16:49:20,363 [wrapper] pilotpid: 35680
[2025-07-26 12:49:22] 2025-07-26 16:49:20,395 [wrapper] Pilot exit status: 0
[2025-07-26 12:49:22] 2025-07-26 16:49:20,772 [wrapper] pandaids: 6745098926
[2025-07-26 12:49:22] 2025-07-26 16:49:21,203 [wrapper] cleanup supervisor_pilot 36039 35681
[2025-07-26 12:49:22] 2025-07-26 16:49:21,237 [wrapper] Test setup, not cleaning
[2025-07-26 12:49:22] 2025-07-26 16:49:21,278 [wrapper] apfmon messages muted
[2025-07-26 12:49:22] 2025-07-26 16:49:21,313 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:49:22] 2025-07-26 16:49:21,353 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:49:22]  *** Error codes and diagnostics ***
[2025-07-26 12:49:22]     "exeErrorCode": 0,
[2025-07-26 12:49:22]     "exeErrorDiag": "",
[2025-07-26 12:49:22]     "pilotErrorCode": 0,
[2025-07-26 12:49:22]     "pilotErrorDiag": "",
[2025-07-26 12:49:22]  *** Listing of results directory ***
[2025-07-26 12:49:22] total 359656
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 02:56 queuedata.json
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 02:56 pilot3.tar.gz
[2025-07-26 12:49:22] -rwx------ 1 boincer umatlas     36292 Jul 26 02:57 runpilot2-wrapper.sh
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas       100 Jul 26 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:49:22] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 08:43 run_atlas
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas       105 Jul 26 08:43 job.xml
[2025-07-26 12:49:22] -rw-r--r-- 2 boincer umatlas 150818668 Jul 26 08:43 EVNT.45743347._001914.pool.root.1
[2025-07-26 12:49:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 08:43 start_atlas.sh
[2025-07-26 12:49:22] drwxrwx--x 2 boincer umatlas      4096 Jul 26 08:43 shared
[2025-07-26 12:49:22] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 08:43 input.tar.gz
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas         0 Jul 26 08:43 boinc_lockfile
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas      2560 Jul 26 08:43 pandaJob.out
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas    980117 Jul 26 08:44 agis_schedconf.cvmfs.json
[2025-07-26 12:49:22] drwx------ 4 boincer umatlas      4096 Jul 26 08:44 pilot3
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas 210259382 Jul 26 12:45 HITS.45743349._033886.pool.root.1
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas       531 Jul 26 12:46 boinc_task_state.xml
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas      1060 Jul 26 12:47 memory_monitor_summary.json
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas      6227 Jul 26 12:47 init_data.xml
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas   1593052 Jul 26 12:47 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas    416186 Jul 26 12:47 log.45743349._033886.job.log.tgz.1
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas      7849 Jul 26 12:48 heartbeat.json
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas        95 Jul 26 12:49 pilot_heartbeat.json
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas       821 Jul 26 12:49 pilotlog.txt
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 12:49 boinc_mmap_file
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas   1252892 Jul 26 12:49 log.45743349._033886.job.log.1
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas        28 Jul 26 12:49 wrapper_checkpoint.txt
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas       357 Jul 26 12:49 output.list
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas       620 Jul 26 12:49 runtime_log
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas   1689600 Jul 26 12:49 result.tar.gz
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas       661 Jul 26 12:49 KooKDmy1nz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhK0KDmLAf0Fo.diag
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas      8658 Jul 26 12:49 runtime_log.err
[2025-07-26 12:49:22] -rw-r--r-- 1 boincer umatlas     21132 Jul 26 12:49 stderr.txt
[2025-07-26 12:49:22] HITS file was successfully produced:
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas 210259382 Jul 26 12:45 shared/HITS.pool.root.1
[2025-07-26 12:49:22]  *** Contents of shared directory: ***
[2025-07-26 12:49:22] total 354820
[2025-07-26 12:49:22] -rw-r--r-- 2 boincer umatlas 150818668 Jul 26 08:43 ATLAS.root_0
[2025-07-26 12:49:22] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 08:43 start_atlas.sh
[2025-07-26 12:49:22] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 08:43 input.tar.gz
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas 210259382 Jul 26 12:45 HITS.pool.root.1
[2025-07-26 12:49:22] -rw------- 1 boincer umatlas   1689600 Jul 26 12:49 result.tar.gz
12:49:24 (17839): run_atlas exited; CPU time 62336.801663
12:49:24 (17839): called boinc_finish(0)

</stderr_txt>
]]>

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