Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:34:43 (17539): wrapper (7.7.26015): starting
08:34:43 (17539): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 08:34:43] Arguments: --nthreads 12
[2025-07-26 08:34:43] Threads: 12
[2025-07-26 08:34:43] Checking for CVMFS
[2025-07-26 08:34:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 08:34:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 08:34:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 08:34:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 08:34:43] 2.11.2.0 3035 110522 98596 148777 1 58 14803185 20275201 1 130560 0 36589639 99.970 10085936 11085 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 08:34:43] CVMFS is ok
[2025-07-26 08:34:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 08:34:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 08:34:43] Further information can be found at the LHC@home message board.
[2025-07-26 08:34:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 08:34:43] Checking for apptainer binary...
[2025-07-26 08:34:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 08:34:43] Running /usr/bin/apptainer --version
[2025-07-26 08:34:43] apptainer version 1.3.2-1.el7
[2025-07-26 08:34:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 08:34:45] c-205-31.aglt2.org
[2025-07-26 08:34:45] apptainer works
[2025-07-26 08:34:45] Set ATHENA_PROC_NUMBER=12
[2025-07-26 08:34:45] Set ATHENA_CORE_NUMBER=12
[2025-07-26 08:34:45] Starting ATLAS job with PandaID=6745098655
[2025-07-26 08:34:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 10:00:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 10:00:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 10:00:26]  replicas=None
[2025-07-26 10:00:26]  scope=mc23_13p6TeV
[2025-07-26 10:00:26]  status=None
[2025-07-26 10:00:26]  status_code=0
[2025-07-26 10:00:26]  storage_token=
[2025-07-26 10:00:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745098655/log.45743349._033822.job.log.tgz.1
[2025-07-26 10:00:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/88/log.45743349._033822.job.log.tgz.1
[2025-07-26 10:00:26]  workdir=None
[2025-07-26 10:00:26] ]
[2025-07-26 10:00:26] 2025-07-26 13:59:58,927 | INFO     | transferring file log.45743349._033822.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745098655/log.45743349._033822.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 10:00:26] 2025-07-26 13:59:58,928 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745098655/log.45743349._033822.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._033822.job
[2025-07-26 10:00:26] 2025-07-26 13:59:58,950 | INFO     | adding to output.list: log.45743349._033822.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/88/log.45743349._033822.job.log.tg
[2025-07-26 10:00:26] 2025-07-26 13:59:58,951 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 10:00:26] 2025-07-26 13:59:58,951 | INFO     | summary of transferred files:
[2025-07-26 10:00:26] 2025-07-26 13:59:58,952 | INFO     |  -- lfn=log.45743349._033822.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 10:00:26] 2025-07-26 13:59:58,952 | INFO     | stage-out finished correctly
[2025-07-26 10:00:26] 2025-07-26 13:59:59,073 | INFO     | monitor loop #382: job 0:6745098655 is in state 'finished'
[2025-07-26 10:00:26] 2025-07-26 13:59:59,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:00:26] 2025-07-26 14:00:01,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 10:00:26] 2025-07-26 14:00:01,576 | INFO     | monitor loop #383: job 0:6745098655 is in state 'finished'
[2025-07-26 10:00:26] 2025-07-26 14:00:01,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:00:26] 2025-07-26 14:00:02,654 | INFO     | job 6745098655 has state=finished
[2025-07-26 10:00:26] 2025-07-26 14:00:02,655 | INFO     | preparing for final server update for job 6745098655 in state='finished'
[2025-07-26 10:00:26] 2025-07-26 14:00:02,655 | INFO     | this job has now completed (state=finished)
[2025-07-26 10:00:26] 2025-07-26 14:00:02,655 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 10:00:26] 2025-07-26 14:00:02,656 | INFO     | log transfer has been attempted: DONE
[2025-07-26 10:00:26] 2025-07-26 14:00:02,656 | INFO     | job 6745098655 has finished - writing final server update
[2025-07-26 10:00:26] 2025-07-26 14:00:02,656 | INFO     | total number of processed events: 400 (read)
[2025-07-26 10:00:26] 2025-07-26 14:00:02,657 | INFO     | executing command: lscpu
[2025-07-26 10:00:26] 2025-07-26 14:00:02,684 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 10:00:26] 2025-07-26 14:00:03,514 | INFO     | PID=21377 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 10:00:26] 2025-07-26 14:00:04,079 | INFO     | monitor loop #384: job 0:6745098655 is in state 'finished'
[2025-07-26 10:00:26] 2025-07-26 14:00:04,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:00:26] 2025-07-26 14:00:06,583 | INFO     | monitor loop #385: job 0:6745098655 is in state 'finished'
[2025-07-26 10:00:26] 2025-07-26 14:00:06,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,525 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 10:00:26] 2025-07-26 14:00:08,526 | INFO     | 5112s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 10:00:26] 2025-07-26 14:00:08,529 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-26 10:00:26] 2025-07-26 14:00:08,531 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745098655/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,532 | INFO     | extracted standard info from prmon json
[2025-07-26 10:00:26] 2025-07-26 14:00:08,532 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 10:00:26] 2025-07-26 14:00:08,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 10:00:26] 2025-07-26 14:00:08,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 10:00:26] 2025-07-26 14:00:08,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 10:00:26] 2025-07-26 14:00:08,535 | INFO     | fitting pss+swap vs Time
[2025-07-26 10:00:26] 2025-07-26 14:00:08,535 | INFO     | sum of square deviations: 141539398.0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,536 | INFO     | sum of deviations: -11001261245.000002
[2025-07-26 10:00:26] 2025-07-26 14:00:08,536 | INFO     | mean x: 1753535952.0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,536 | INFO     | mean y: 2812562.909090909
[2025-07-26 10:00:26] 2025-07-26 14:00:08,536 | INFO     | -- intersect: 136297776248.22717
[2025-07-26 10:00:26] 2025-07-26 14:00:08,536 | INFO     | intersect: 136297776248.22717
[2025-07-26 10:00:26] 2025-07-26 14:00:08,536 | INFO     | chi2: 0.06458693243077179
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | -- intersect: 136297776248.22717
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | current memory leak: -77.73 B/s (using 77 data points, chi2=0.06)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | could have reported an average CPU frequency of 2032 MHz (6 samples)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | ..............................
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | . Timing measurements:
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | . get job = 0 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,537 | INFO     | . initial setup = 2 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,538 | INFO     | . payload setup = 9 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,538 | INFO     | . stage-in = 0 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,538 | INFO     | . payload execution = 5069 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,538 | INFO     | . stage-out = 0 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,538 | INFO     | . log creation = 0 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,538 | INFO     | ..............................
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | 
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | job summary report
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | --------------------------------------------------
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | PanDA job id: 6745098655
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | task id: 45743349
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | errors: (none)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 10:00:26] 2025-07-26 14:00:08,622 | INFO     | pilot state: finished 
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | transexitcode: 0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | exeerrorcode: 0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | exeerrordiag: 
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | exitcode: 0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | exitmsg: OK
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | cpuconsumptiontime: 55172 s
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | nevents: 400
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | neventsw: 0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | pid: 29302
[2025-07-26 10:00:26] 2025-07-26 14:00:08,623 | INFO     | pgrp: 29302
[2025-07-26 10:00:26] 2025-07-26 14:00:08,624 | INFO     | corecount: 12
[2025-07-26 10:00:26] 2025-07-26 14:00:08,624 | INFO     | event service: False
[2025-07-26 10:00:26] 2025-07-26 14:00:08,624 | INFO     | sizes: {0: 2397474, 5: 2397736, 11: 2397792, 5082: 2424094, 5084: 2433092, 5087: 2433148, 5094: 2433470}
[2025-07-26 10:00:26] 2025-07-26 14:00:08,624 | INFO     | --------------------------------------------------
[2025-07-26 10:00:26] 2025-07-26 14:00:08,624 | INFO     | 
[2025-07-26 10:00:26] 2025-07-26 14:00:08,624 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 10:00:26] 2025-07-26 14:00:08,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,648 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,648 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 10:00:26] 2025-07-26 14:00:08,651 | INFO     | job 6745098655 has completed (purged errors)
[2025-07-26 10:00:26] 2025-07-26 14:00:08,651 | INFO     | overall cleanup function is called
[2025-07-26 10:00:26] 2025-07-26 14:00:09,659 | INFO     | --- collectZombieJob: --- 10, [29302]
[2025-07-26 10:00:26] 2025-07-26 14:00:09,659 | INFO     | zombie collector waiting for pid 29302
[2025-07-26 10:00:26] 2025-07-26 14:00:09,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 10:00:26] 2025-07-26 14:00:09,659 | INFO     | collected zombie processes
[2025-07-26 10:00:26] 2025-07-26 14:00:09,659 | INFO     | will attempt to kill all subprocesses of pid=29302
[2025-07-26 10:00:26] 2025-07-26 14:00:09,756 | INFO     | process IDs to be killed: [29302] (in reverse order)
[2025-07-26 10:00:26] 2025-07-26 14:00:09,809 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 10:00:26] 2025-07-26 14:00:09,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 10:00:26] 2025-07-26 14:00:09,814 | INFO     | did not find any defunct processes belonging to 29302
[2025-07-26 10:00:26] 2025-07-26 14:00:09,817 | INFO     | did not find any defunct processes belonging to 29302
[2025-07-26 10:00:26] 2025-07-26 14:00:09,817 | INFO     | ready for new job
[2025-07-26 10:00:26] 2025-07-26 14:00:09,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 10:00:26] 2025-07-26 14:00:09,818 | INFO     | ***************************************
[2025-07-26 10:00:26] 2025-07-26 14:00:09,818 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 10:00:26] 2025-07-26 14:00:09,819 | INFO     | ***************************************
[2025-07-26 10:00:26] 2025-07-26 14:00:09,819 | INFO     | 
[2025-07-26 10:00:26] 2025-07-26 14:00:09,819 | INFO     | architecture information:
[2025-07-26 10:00:26] 2025-07-26 14:00:09,820 | INFO     | executing command: cat /etc/os-release
[2025-07-26 10:00:26] 2025-07-26 14:00:09,836 | INFO     | cat /etc/os-release:
[2025-07-26 10:00:26] NAME="CentOS Linux"
[2025-07-26 10:00:26] VERSION="7 (Core)"
[2025-07-26 10:00:26] ID="centos"
[2025-07-26 10:00:26] ID_LIKE="rhel fedora"
[2025-07-26 10:00:26] VERSION_ID="7"
[2025-07-26 10:00:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 10:00:26] ANSI_COLOR="0;31"
[2025-07-26 10:00:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 10:00:26] HOME_URL="https://www.centos.org/"
[2025-07-26 10:00:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 10:00:26] 
[2025-07-26 10:00:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 10:00:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 10:00:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 10:00:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 10:00:26] 
[2025-07-26 10:00:26] 2025-07-26 14:00:09,836 | INFO     | ***************************************
[2025-07-26 10:00:26] 2025-07-26 14:00:10,339 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 10:00:26] 2025-07-26 14:00:10,356 | INFO     | sufficient remaining disk space (29433528320 B)
[2025-07-26 10:00:26] 2025-07-26 14:00:10,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 10:00:26] 2025-07-26 14:00:10,357 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 10:00:26] 2025-07-26 14:00:10,357 | INFO     | update_server=False
[2025-07-26 10:00:26] 2025-07-26 14:00:10,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 10:00:26] 2025-07-26 14:00:10,357 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 10:00:26] 2025-07-26 14:00:10,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 10:00:26] 2025-07-26 14:00:10,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:00:26] 2025-07-26 14:00:10,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 10:00:26] 2025-07-26 14:00:10,359 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 10:00:26] 2025-07-26 14:00:10,359 | INFO     | aborting loop
[2025-07-26 10:00:26] 2025-07-26 14:00:10,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 10:00:26] 2025-07-26 14:00:10,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 10:00:26] 2025-07-26 14:00:10,685 | INFO     | all job control threads have been joined
[2025-07-26 10:00:26] 2025-07-26 14:00:10,872 | INFO     | all data control threads have been joined
[2025-07-26 10:00:26] 2025-07-26 14:00:11,362 | INFO     | [job] retrieve thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,364 | INFO     | [job] queue monitor thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,365 | INFO     | [job] job monitor thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,489 | INFO     | all payload control threads have been joined
[2025-07-26 10:00:26] 2025-07-26 14:00:11,492 | INFO     | [payload] failed_post thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,691 | INFO     | [job] control thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,840 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,877 | INFO     | [data] control thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:11,907 | INFO     | [data] copytool_in thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:12,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 10:00:26] 2025-07-26 14:00:12,331 | INFO     | [payload] validate_post thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:12,364 | INFO     | [data] copytool_out thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:12,494 | INFO     | [payload] control thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:12,593 | INFO     | [job] validate thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:12,711 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:12,838 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:16,025 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:20,445 | INFO     | job.realtimelogging is not enabled
[2025-07-26 10:00:26] 2025-07-26 14:00:21,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 10:00:26] 2025-07-26 14:00:21,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140387137288000)>', '<ExcThread(monitor, started 140386567710464)>']
[2025-07-26 10:00:26] 2025-07-26 14:00:22,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 10:00:26] 2025-07-26 14:00:22,416 | INFO     | [monitor] control thread has ended
[2025-07-26 10:00:26] 2025-07-26 14:00:26,481 | INFO     | all workflow threads have been joined
[2025-07-26 10:00:26] 2025-07-26 14:00:26,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 10:00:26] 2025-07-26 14:00:26,481 | INFO     | traces error code: 0
[2025-07-26 10:00:26] 2025-07-26 14:00:26,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 10:00:26] 2025-07-26 14:00:26,562 [wrapper] ==== pilot stdout END ====
[2025-07-26 10:00:26] 2025-07-26 14:00:26,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 10:00:26] 2025-07-26 14:00:26,569 [wrapper] pilotpid: 21377
[2025-07-26 10:00:26] 2025-07-26 14:00:26,573 [wrapper] Pilot exit status: 0
[2025-07-26 10:00:26] 2025-07-26 14:00:26,589 [wrapper] pandaids: 6745098655
[2025-07-26 10:00:26] 2025-07-26 14:00:26,629 [wrapper] cleanup supervisor_pilot 17730 21378
[2025-07-26 10:00:26] 2025-07-26 14:00:26,633 [wrapper] Test setup, not cleaning
[2025-07-26 10:00:26] 2025-07-26 14:00:26,637 [wrapper] apfmon messages muted
[2025-07-26 10:00:26] 2025-07-26 14:00:26,641 [wrapper] ==== wrapper stdout END ====
[2025-07-26 10:00:26] 2025-07-26 14:00:26,645 [wrapper] ==== wrapper stderr END ====
[2025-07-26 10:00:26]  *** Error codes and diagnostics ***
[2025-07-26 10:00:26]     "exeErrorCode": 0,
[2025-07-26 10:00:26]     "exeErrorDiag": "",
[2025-07-26 10:00:26]     "pilotErrorCode": 0,
[2025-07-26 10:00:26]     "pilotErrorDiag": "",
[2025-07-26 10:00:26]  *** Listing of results directory ***
[2025-07-26 10:00:26] total 392852
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 02:42 pilot3.tar.gz
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 02:52 queuedata.json
[2025-07-26 10:00:26] -rwx------ 1 boincer umatlas     36292 Jul 26 02:54 runpilot2-wrapper.sh
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas       100 Jul 26 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 10:00:26] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 08:34 run_atlas
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas       105 Jul 26 08:34 job.xml
[2025-07-26 10:00:26] -rw-r--r-- 2 boincer umatlas 186814344 Jul 26 08:34 EVNT.45743347._001909.pool.root.1
[2025-07-26 10:00:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 08:34 start_atlas.sh
[2025-07-26 10:00:26] drwxrwx--x 2 boincer umatlas      4096 Jul 26 08:34 shared
[2025-07-26 10:00:26] -rw-r--r-- 2 boincer umatlas    542893 Jul 26 08:34 input.tar.gz
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas         0 Jul 26 08:34 boinc_lockfile
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas      2562 Jul 26 08:34 pandaJob.out
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas    980117 Jul 26 08:34 agis_schedconf.cvmfs.json
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas   1593052 Jul 26 08:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 10:00:26] drwx------ 4 boincer umatlas      4096 Jul 26 08:34 pilot3
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 09:55 init_data.xml
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas 209882802 Jul 26 09:59 HITS.45743349._033822.pool.root.1
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas       529 Jul 26 09:59 boinc_task_state.xml
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas      1051 Jul 26 09:59 memory_monitor_summary.json
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas    372192 Jul 26 09:59 log.45743349._033822.job.log.tgz.1
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas        95 Jul 26 10:00 pilot_heartbeat.json
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas      7857 Jul 26 10:00 heartbeat.json
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 10:00 boinc_mmap_file
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas        27 Jul 26 10:00 wrapper_checkpoint.txt
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas      4552 Jul 26 10:00 pilotlog.txt
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas    484097 Jul 26 10:00 log.45743349._033822.job.log.1
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas       357 Jul 26 10:00 output.list
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas       620 Jul 26 10:00 runtime_log
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas    870400 Jul 26 10:00 result.tar.gz
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 10:00 runtime_log.err
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas       659 Jul 26 10:00 fvWKDmRynz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPURLDm2LUtTn.diag
[2025-07-26 10:00:26] -rw-r--r-- 1 boincer umatlas     21938 Jul 26 10:00 stderr.txt
[2025-07-26 10:00:26] HITS file was successfully produced:
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas 209882802 Jul 26 09:59 shared/HITS.pool.root.1
[2025-07-26 10:00:26]  *** Contents of shared directory: ***
[2025-07-26 10:00:26] total 388804
[2025-07-26 10:00:26] -rw-r--r-- 2 boincer umatlas 186814344 Jul 26 08:34 ATLAS.root_0
[2025-07-26 10:00:26] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 08:34 start_atlas.sh
[2025-07-26 10:00:26] -rw-r--r-- 2 boincer umatlas    542893 Jul 26 08:34 input.tar.gz
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas 209882802 Jul 26 09:59 HITS.pool.root.1
[2025-07-26 10:00:26] -rw------- 1 boincer umatlas    870400 Jul 26 10:00 result.tar.gz
10:00:28 (17539): run_atlas exited; CPU time 55142.554067
10:00:28 (17539): called boinc_finish(0)

</stderr_txt>
]]>

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