Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:18:25 (1542699): wrapper (7.7.26015): starting
08:18:25 (1542699): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 08:18:25] Arguments: --nthreads 8
[2025-07-26 08:18:25] Threads: 8
[2025-07-26 08:18:25] Checking for CVMFS
[2025-07-26 08:18:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 08:18:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 08:18:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 08:18:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 08:18:26] 2.13.1.0 3153527 6922 140568 148777 1 61 22040396 40960001 11499 16776704 0 90848884 99.999 253223 58091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 08:18:26] CVMFS is ok
[2025-07-26 08:18:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 08:18:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 08:18:26] Further information can be found at the LHC@home message board.
[2025-07-26 08:18:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 08:18:26] Checking for apptainer binary...
[2025-07-26 08:18:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 08:18:26] Running /usr/bin/apptainer --version
[2025-07-26 08:18:26] apptainer version 1.4.1-1.el9
[2025-07-26 08:18:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 08:18:26] c-208-37.aglt2.org
[2025-07-26 08:18:26] apptainer works
[2025-07-26 08:18:26] Set ATHENA_PROC_NUMBER=8
[2025-07-26 08:18:26] Set ATHENA_CORE_NUMBER=8
[2025-07-26 08:18:26] Starting ATLAS job with PandaID=6745065530
[2025-07-26 08:18:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 09:11:43]  *** The last 200 lines of the pilot log: ***
[2025-07-26 09:11:43]  lfn=log.45743349._028508.job.log.tgz.1
[2025-07-26 09:11:43]  mtime=0
[2025-07-26 09:11:43]  protocol_id=None
[2025-07-26 09:11:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 09:11:43]  replicas=None
[2025-07-26 09:11:43]  scope=mc23_13p6TeV
[2025-07-26 09:11:43]  status=None
[2025-07-26 09:11:43]  status_code=0
[2025-07-26 09:11:43]  storage_token=
[2025-07-26 09:11:43]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6745065530/log.45743349._028508.job.log.tgz.1
[2025-07-26 09:11:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/8a/log.45743349._028508.job.log.tgz.1
[2025-07-26 09:11:43]  workdir=None
[2025-07-26 09:11:43] ]
[2025-07-26 09:11:43] 2025-07-26 13:11:06,311 | INFO     | transferring file log.45743349._028508.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6745065530/log.45743349._028508.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 09:11:43] 2025-07-26 13:11:06,312 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6745065530/log.45743349._028508.job.log.tgz.1 /tmp/boinchome/slots/10/log.45743349._028508.j
[2025-07-26 09:11:43] 2025-07-26 13:11:06,330 | INFO     | adding to output.list: log.45743349._028508.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/49/8a/log.45743349._028508.job.log.tg
[2025-07-26 09:11:43] 2025-07-26 13:11:06,331 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 09:11:43] 2025-07-26 13:11:06,331 | INFO     | summary of transferred files:
[2025-07-26 09:11:43] 2025-07-26 13:11:06,331 | INFO     |  -- lfn=log.45743349._028508.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 09:11:43] 2025-07-26 13:11:06,332 | INFO     | stage-out finished correctly
[2025-07-26 09:11:43] 2025-07-26 13:11:06,389 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 09:11:43] 2025-07-26 13:11:06,448 | INFO     | job 6745065530 has state=finished
[2025-07-26 09:11:43] 2025-07-26 13:11:06,448 | INFO     | preparing for final server update for job 6745065530 in state='finished'
[2025-07-26 09:11:43] 2025-07-26 13:11:06,449 | INFO     | this job has now completed (state=finished)
[2025-07-26 09:11:43] 2025-07-26 13:11:06,449 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 09:11:43] 2025-07-26 13:11:06,449 | INFO     | log transfer has been attempted: DONE
[2025-07-26 09:11:43] 2025-07-26 13:11:06,449 | INFO     | job 6745065530 has finished - writing final server update
[2025-07-26 09:11:43] 2025-07-26 13:11:06,449 | INFO     | total number of processed events: 400 (read)
[2025-07-26 09:11:43] 2025-07-26 13:11:06,450 | INFO     | executing command: lscpu
[2025-07-26 09:11:43] 2025-07-26 13:11:06,491 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 09:11:43] 2025-07-26 13:11:06,676 | INFO     | PID=1548437 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 09:11:43] 2025-07-26 13:11:06,676 | INFO     | .. there are 15 such processes running
[2025-07-26 09:11:43] 2025-07-26 13:11:08,209 | WARNING  | process 1556899 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 09:11:43] 2025-07-26 13:11:08,209 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6745065530/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 09:11:43] 2025-07-26 13:11:08,563 | INFO     | number of running child processes to parent process 1556899: 1
[2025-07-26 09:11:43] 2025-07-26 13:11:08,563 | INFO     | maximum number of monitored processes: 6
[2025-07-26 09:11:43] 2025-07-26 13:11:09,997 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 09:11:43] 2025-07-26 13:11:10,003 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3752.909367187499
[2025-07-26 09:11:43] 2025-07-26 13:11:10,016 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6745065530/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 09:11:43] 2025-07-26 13:11:10,016 | INFO     | extracted standard info from prmon json
[2025-07-26 09:11:43] 2025-07-26 13:11:10,016 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 09:11:43] 2025-07-26 13:11:10,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 09:11:43] 2025-07-26 13:11:10,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 09:11:43] 2025-07-26 13:11:10,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | fitting pss+swap vs Time
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | sum of square deviations: 28242390.0
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | sum of deviations: -291515339.99999994
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | mean x: 1753533986.0
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | mean y: 2553619.0888888887
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | -- intersect: 18102369397.085907
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | intersect: 18102369397.085907
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | chi2: 0.0001240069134179994
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | -- intersect: 18102369397.085907
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | current memory leak: -10.32 B/s (using 45 data points, chi2=0.00)
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | could have reported an average CPU frequency of 3710 MHz (5 samples)
[2025-07-26 09:11:43] 2025-07-26 13:11:10,018 | INFO     | ..............................
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . Timing measurements:
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . get job = 0 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . initial setup = 2 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . payload setup = 5 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . stage-in = 0 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . payload execution = 3126 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . stage-out = 0 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | . log creation = 0 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,019 | INFO     | ..............................
[2025-07-26 09:11:43] 2025-07-26 13:11:10,078 | INFO     | 
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | job summary report
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | --------------------------------------------------
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | PanDA job id: 6745065530
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | task id: 45743349
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | errors: (none)
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | pilot state: finished 
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | transexitcode: 0
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | exeerrorcode: 0
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | exeerrordiag: 
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | exitcode: 0
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | exitmsg: OK
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | cpuconsumptiontime: 23461 s
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | nevents: 400
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | neventsw: 0
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | pid: 1556899
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | pgrp: 1556899
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | corecount: 8
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | event service: False
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | sizes: {0: 2397476, 4: 2397738, 11: 2397766, 3135: 2423264, 3136: 2432319, 3137: 2432319, 3140: 2432673}
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | --------------------------------------------------
[2025-07-26 09:11:43] 2025-07-26 13:11:10,079 | INFO     | 
[2025-07-26 09:11:43] 2025-07-26 13:11:10,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-26 09:11:43] 2025-07-26 13:11:10,095 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,095 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,095 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,095 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | job 6745065530 has completed (purged errors)
[2025-07-26 09:11:43] 2025-07-26 13:11:10,096 | INFO     | overall cleanup function is called
[2025-07-26 09:11:43] 2025-07-26 13:11:11,104 | INFO     | --- collectZombieJob: --- 10, [1556899]
[2025-07-26 09:11:43] 2025-07-26 13:11:11,104 | INFO     | zombie collector waiting for pid 1556899
[2025-07-26 09:11:43] 2025-07-26 13:11:11,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 09:11:43] 2025-07-26 13:11:11,104 | INFO     | collected zombie processes
[2025-07-26 09:11:43] 2025-07-26 13:11:11,104 | INFO     | will attempt to kill all subprocesses of pid=1556899
[2025-07-26 09:11:43] 2025-07-26 13:11:11,453 | INFO     | process IDs to be killed: [1556899] (in reverse order)
[2025-07-26 09:11:43] 2025-07-26 13:11:11,568 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 09:11:43] 2025-07-26 13:11:11,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 09:11:43] 2025-07-26 13:11:11,585 | INFO     | did not find any defunct processes belonging to 1556899
[2025-07-26 09:11:43] 2025-07-26 13:11:11,596 | INFO     | did not find any defunct processes belonging to 1556899
[2025-07-26 09:11:43] 2025-07-26 13:11:11,596 | INFO     | ready for new job
[2025-07-26 09:11:43] 2025-07-26 13:11:11,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 09:11:43] 2025-07-26 13:11:11,597 | INFO     | ***************************************
[2025-07-26 09:11:43] 2025-07-26 13:11:11,598 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 09:11:43] 2025-07-26 13:11:11,598 | INFO     | ***************************************
[2025-07-26 09:11:43] 2025-07-26 13:11:11,598 | INFO     | 
[2025-07-26 09:11:43] 2025-07-26 13:11:11,603 | INFO     | architecture information:
[2025-07-26 09:11:43] 2025-07-26 13:11:11,603 | INFO     | executing command: cat /etc/os-release
[2025-07-26 09:11:43] 2025-07-26 13:11:11,616 | INFO     | cat /etc/os-release:
[2025-07-26 09:11:43] NAME="CentOS Linux"
[2025-07-26 09:11:43] VERSION="7 (Core)"
[2025-07-26 09:11:43] ID="centos"
[2025-07-26 09:11:43] ID_LIKE="rhel fedora"
[2025-07-26 09:11:43] VERSION_ID="7"
[2025-07-26 09:11:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 09:11:43] ANSI_COLOR="0;31"
[2025-07-26 09:11:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 09:11:43] HOME_URL="https://www.centos.org/"
[2025-07-26 09:11:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 09:11:43] 
[2025-07-26 09:11:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 09:11:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 09:11:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 09:11:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 09:11:43] 
[2025-07-26 09:11:43] 2025-07-26 13:11:11,617 | INFO     | ***************************************
[2025-07-26 09:11:43] 2025-07-26 13:11:12,119 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-26 09:11:43] 2025-07-26 13:11:12,134 | INFO     | sufficient remaining disk space (166622920704 B)
[2025-07-26 09:11:43] 2025-07-26 13:11:12,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 09:11:43] 2025-07-26 13:11:12,134 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 09:11:43] 2025-07-26 13:11:12,134 | INFO     | update_server=False
[2025-07-26 09:11:43] 2025-07-26 13:11:12,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 09:11:43] 2025-07-26 13:11:12,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 09:11:43] 2025-07-26 13:11:12,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 09:11:43] 2025-07-26 13:11:12,135 | INFO     | aborting loop
[2025-07-26 09:11:43] 2025-07-26 13:11:12,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 09:11:43] 2025-07-26 13:11:13,098 | INFO     | all data control threads have been joined
[2025-07-26 09:11:43] 2025-07-26 13:11:13,139 | INFO     | [job] retrieve thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:13,140 | INFO     | [job] job monitor thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:13,152 | INFO     | [payload] validate_post thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:13,428 | INFO     | all payload control threads have been joined
[2025-07-26 09:11:43] 2025-07-26 13:11:13,566 | INFO     | all job control threads have been joined
[2025-07-26 09:11:43] 2025-07-26 13:11:13,640 | INFO     | [job] validate thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:13,658 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:13,682 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:13,786 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:14,103 | INFO     | [data] control thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:14,140 | INFO     | [data] copytool_out thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:14,238 | INFO     | [payload] failed_post thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:14,433 | INFO     | [payload] control thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:14,485 | INFO     | [data] copytool_in thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:14,571 | INFO     | [job] control thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:15,090 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 09:11:43] 2025-07-26 13:11:16,095 | INFO     | [job] queue monitor thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:16,460 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:23,171 | INFO     | job.realtimelogging is not enabled
[2025-07-26 09:11:43] 2025-07-26 13:11:24,176 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 09:11:43] 2025-07-26 13:11:26,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795958064960)>', '<ExcThread(monitor, started 139795472836352)>']
[2025-07-26 09:11:43] 2025-07-26 13:11:31,064 | INFO     | all workflow threads have been joined
[2025-07-26 09:11:43] 2025-07-26 13:11:31,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 09:11:43] 2025-07-26 13:11:31,065 | INFO     | traces error code: 0
[2025-07-26 09:11:43] 2025-07-26 13:11:31,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 09:11:43] 2025-07-26 13:11:43,184 | INFO     | PID=1548437 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 09:11:43] 2025-07-26 13:11:43,184 | INFO     | .. there are 15 such processes running
[2025-07-26 09:11:43] 2025-07-26 13:11:43,185 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 09:11:43] 2025-07-26 13:11:43,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 09:11:43] 2025-07-26 13:11:43,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 09:11:43] 2025-07-26 13:11:43,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 09:11:43] 2025-07-26 13:11:43,185 | INFO     | [monitor] control thread has ended
[2025-07-26 09:11:43] 2025-07-26 13:11:43,278 [wrapper] ==== pilot stdout END ====
[2025-07-26 09:11:43] 2025-07-26 13:11:43,280 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 09:11:43] 2025-07-26 13:11:43,283 [wrapper] pilotpid: 1548437
[2025-07-26 09:11:43] 2025-07-26 13:11:43,285 [wrapper] Pilot exit status: 0
[2025-07-26 09:11:43] 2025-07-26 13:11:43,295 [wrapper] pandaids: 6745065530
[2025-07-26 09:11:43] 2025-07-26 13:11:43,378 [wrapper] cleanup supervisor_pilot 1851947 1548438
[2025-07-26 09:11:43] 2025-07-26 13:11:43,380 [wrapper] Test setup, not cleaning
[2025-07-26 09:11:43] 2025-07-26 13:11:43,383 [wrapper] apfmon messages muted
[2025-07-26 09:11:43] 2025-07-26 13:11:43,385 [wrapper] ==== wrapper stdout END ====
[2025-07-26 09:11:43] 2025-07-26 13:11:43,387 [wrapper] ==== wrapper stderr END ====
[2025-07-26 09:11:43]  *** Error codes and diagnostics ***
[2025-07-26 09:11:43]     "exeErrorCode": 0,
[2025-07-26 09:11:43]     "exeErrorDiag": "",
[2025-07-26 09:11:43]     "pilotErrorCode": 0,
[2025-07-26 09:11:43]     "pilotErrorDiag": "",
[2025-07-26 09:11:43]  *** Listing of results directory ***
[2025-07-26 09:11:43] total 341820
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 18:55 pilot3.tar.gz
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 18:56 queuedata.json
[2025-07-26 09:11:43] -rwx------. 1 boincer umatlas     36292 Jul 25 18:58 runpilot2-wrapper.sh
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas       100 Jul 26 08:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 09:11:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 08:18 run_atlas
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas       105 Jul 26 08:18 job.xml
[2025-07-26 09:11:43] -rw-r--r--. 2 boincer umatlas 145366105 Jul 26 08:18 EVNT.45743347._001592.pool.root.1
[2025-07-26 09:11:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 08:18 start_atlas.sh
[2025-07-26 09:11:43] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 08:18 shared
[2025-07-26 09:11:43] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 08:18 input.tar.gz
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas         0 Jul 26 08:18 boinc_lockfile
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 08:18 pandaJob.out
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas    980117 Jul 26 08:18 agis_schedconf.cvmfs.json
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas   1593052 Jul 26 08:18 agis_ddmendpoints.agis.ALL.json
[2025-07-26 09:11:43] drwx------. 4 boincer umatlas      4096 Jul 26 08:18 pilot3
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas 199532912 Jul 26 09:10 HITS.45743349._028508.pool.root.1
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas       529 Jul 26 09:10 boinc_task_state.xml
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas      1027 Jul 26 09:11 memory_monitor_summary.json
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas    294344 Jul 26 09:11 log.45743349._028508.job.log.tgz.1
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas      7765 Jul 26 09:11 heartbeat.json
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas      7175 Jul 26 09:11 init_data.xml
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas        27 Jul 26 09:11 wrapper_checkpoint.txt
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 09:11 boinc_mmap_file
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas       823 Jul 26 09:11 pilotlog.txt
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas        95 Jul 26 09:11 pilot_heartbeat.json
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas    329016 Jul 26 09:11 log.45743349._028508.job.log.1
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas       357 Jul 26 09:11 output.list
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas       620 Jul 26 09:11 runtime_log
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas    645120 Jul 26 09:11 result.tar.gz
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 09:11 runtime_log.err
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas       651 Jul 26 09:11 Kf5LDmXYgz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlkzKDm6UuKRm.diag
[2025-07-26 09:11:43] -rw-r--r--. 1 boincer umatlas     21737 Jul 26 09:11 stderr.txt
[2025-07-26 09:11:43] HITS file was successfully produced:
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas 199532912 Jul 26 09:10 shared/HITS.pool.root.1
[2025-07-26 09:11:43]  *** Contents of shared directory: ***
[2025-07-26 09:11:43] total 338004
[2025-07-26 09:11:43] -rw-r--r--. 2 boincer umatlas 145366105 Jul 26 08:18 ATLAS.root_0
[2025-07-26 09:11:43] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 08:18 start_atlas.sh
[2025-07-26 09:11:43] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 08:18 input.tar.gz
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas 199532912 Jul 26 09:10 HITS.pool.root.1
[2025-07-26 09:11:43] -rw-------. 1 boincer umatlas    645120 Jul 26 09:11 result.tar.gz
09:11:45 (1542699): run_atlas exited; CPU time 23538.690507
09:11:45 (1542699): called boinc_finish(0)

</stderr_txt>
]]>

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