Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:18:56 (4144985): wrapper (7.7.26015): starting
05:18:56 (4144985): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 05:18:56] Arguments: --nthreads 12
[2025-07-26 05:18:56] Threads: 12
[2025-07-26 05:18:56] Checking for CVMFS
[2025-07-26 05:18:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 05:18:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 05:18:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 05:18:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 05:18:56] 2.11.3.0 1989253 42504 157104 148777 2 67 23753375 45568001 17985 130560 0 487650515 99.771 350848089 18403 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-26 05:18:56] CVMFS is ok
[2025-07-26 05:18:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 05:18:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 05:18:56] Further information can be found at the LHC@home message board.
[2025-07-26 05:18:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 05:18:56] Checking for apptainer binary...
[2025-07-26 05:18:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 05:18:56] Running /usr/bin/apptainer --version
[2025-07-26 05:18:56] apptainer version 1.3.3-1.el9
[2025-07-26 05:18:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 05:18:56] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0169.triumf.lcg
[2025-07-26 05:18:56] apptainer works
[2025-07-26 05:18:56] Set ATHENA_PROC_NUMBER=12
[2025-07-26 05:18:56] Set ATHENA_CORE_NUMBER=12
[2025-07-26 05:18:56] Starting ATLAS job with PandaID=6745102690
[2025-07-26 05:18:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:23:51]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | extracted standard info from prmon json
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | wrong length of table data, x=[1753532452.0], y=[1044.0] (must be same and length>=4)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | could have reported an average CPU frequency of 2832 MHz (4 samples)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | ..............................
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . Timing measurements:
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . get job = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . initial setup = 7 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . payload setup = 23 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . stage-in = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . payload execution = 43 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . stage-out = 1 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . log creation = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | ..............................
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745102690/pilotlog.txt
[2025-07-26 05:23:51] 2025-07-26 12:23:35,974 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-26 05:23:51] - Log from pilotlog.txt -
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745102690/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | extracted standard info from prmon json
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | wrong length of table data, x=[1753532452.0], y=[1044.0] (must be same and length>=4)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | could have reported an average CPU frequency of 2832 MHz (4 samples)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | ..............................
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . Timing measurements:
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . get job = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . initial setup = 7 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . payload setup = 23 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . stage-in = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . payload execution = 43 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . stage-out = 1 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . log creation = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | ..............................
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745102690/pilotlog.txt
[2025-07-26 05:23:51] 2025-07-26 12:23:35,974 | WARNING  | 
[2025-07-26 05:23:51] [begin log extracts]
[2025-07-26 05:23:51] - Log from pilotlog.txt -
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6745102690/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | extracted standard info from prmon json
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:23:51] 2025-07-26 12:23:35,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | WARNING  | wrong length of table data, x=[1753532452.0], y=[1044.0] (must be same and length>=4)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | could have reported an average CPU frequency of 2832 MHz (4 samples)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | ..............................
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . Timing measurements:
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . get job = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,787 | INFO     | . initial setup = 7 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . payload setup = 23 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . stage-in = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . payload execution = 43 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . stage-out = 1 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | . log creation = 0 s
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | ..............................
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-26 05:23:51] 2025-07-26 12:23:35,788 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6745102690/pilotlog.txt
[2025-07-26 05:23:51] [end log extracts]
[2025-07-26 05:23:51] 2025-07-26 12:23:35,974 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-26 05:23:51] 2025-07-26 12:23:35,975 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | 
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | job summary report
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | --------------------------------------------------
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | PanDA job id: 6745102690
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | task id: 45743349
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-26 05:21:12,336 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | pilot state: failed 
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | transexitcode: 65
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | exeerrorcode: 65
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 05:23:51] 2025-07-26 12:23:36,859 | INFO     | exitcode: 65
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | cpuconsumptiontime: 13 s
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | nevents: 0
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | neventsw: 0
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | pid: 4155127
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | pgrp: 4155127
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | corecount: 12
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | event service: False
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | sizes: {0: 2397245, 1: 2397329, 2: 2397528, 3: 2397528, 14: 2397556, 20: 2397846, 24: 2398002, 72: 2421384, 73: 2425676, 74: 2425704, 207: 2425870}
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | --------------------------------------------------
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | 
[2025-07-26 05:23:51] 2025-07-26 12:23:36,860 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-26 05:23:51] 2025-07-26 12:23:36,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,977 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,977 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,977 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:36,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:37,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:37,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:23:51] 2025-07-26 12:23:37,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:37,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:23:51] 2025-07-26 12:23:37,012 | INFO     | job 6745102690 has completed (purged errors)
[2025-07-26 05:23:51] 2025-07-26 12:23:37,012 | INFO     | overall cleanup function is called
[2025-07-26 05:23:51] 2025-07-26 12:23:38,019 | INFO     | --- collectZombieJob: --- 10, [4155127]
[2025-07-26 05:23:51] 2025-07-26 12:23:38,019 | INFO     | zombie collector waiting for pid 4155127
[2025-07-26 05:23:51] 2025-07-26 12:23:38,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:23:51] 2025-07-26 12:23:38,019 | INFO     | collected zombie processes
[2025-07-26 05:23:51] 2025-07-26 12:23:38,019 | INFO     | will attempt to kill all subprocesses of pid=4155127
[2025-07-26 05:23:51] 2025-07-26 12:23:38,209 | INFO     | process IDs to be killed: [4155127] (in reverse order)
[2025-07-26 05:23:51] 2025-07-26 12:23:38,288 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:23:51] 2025-07-26 12:23:38,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:23:51] 2025-07-26 12:23:38,295 | INFO     | did not find any defunct processes belonging to 4155127
[2025-07-26 05:23:51] 2025-07-26 12:23:38,302 | INFO     | did not find any defunct processes belonging to 4155127
[2025-07-26 05:23:51] 2025-07-26 12:23:38,302 | INFO     | ready for new job
[2025-07-26 05:23:51] 2025-07-26 12:23:38,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:23:51] 2025-07-26 12:23:38,303 | INFO     | ***************************************
[2025-07-26 05:23:51] 2025-07-26 12:23:38,303 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:23:51] 2025-07-26 12:23:38,303 | INFO     | ***************************************
[2025-07-26 05:23:51] 2025-07-26 12:23:38,304 | INFO     | 
[2025-07-26 05:23:51] 2025-07-26 12:23:38,318 | INFO     | architecture information:
[2025-07-26 05:23:51] 2025-07-26 12:23:38,319 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:23:51] 2025-07-26 12:23:38,329 | INFO     | cat /etc/os-release:
[2025-07-26 05:23:51] NAME="CentOS Linux"
[2025-07-26 05:23:51] VERSION="7 (Core)"
[2025-07-26 05:23:51] ID="centos"
[2025-07-26 05:23:51] ID_LIKE="rhel fedora"
[2025-07-26 05:23:51] VERSION_ID="7"
[2025-07-26 05:23:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:23:51] ANSI_COLOR="0;31"
[2025-07-26 05:23:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:23:51] HOME_URL="https://www.centos.org/"
[2025-07-26 05:23:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:23:51] 
[2025-07-26 05:23:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:23:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:23:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:23:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:23:51] 
[2025-07-26 05:23:51] 2025-07-26 12:23:38,329 | INFO     | ***************************************
[2025-07-26 05:23:51] 2025-07-26 12:23:38,838 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-26 05:23:51] 2025-07-26 12:23:38,873 | INFO     | sufficient remaining disk space (2480048963584 B)
[2025-07-26 05:23:51] 2025-07-26 12:23:38,873 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:23:51] 2025-07-26 12:23:38,873 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:23:51] 2025-07-26 12:23:38,873 | INFO     | update_server=False
[2025-07-26 05:23:51] 2025-07-26 12:23:38,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:23:51] 2025-07-26 12:23:38,874 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 05:23:51] 2025-07-26 12:23:38,874 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:23:51] 2025-07-26 12:23:38,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:23:51] 2025-07-26 12:23:38,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:23:51] 2025-07-26 12:23:38,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:23:51] 2025-07-26 12:23:38,990 | INFO     | aborting loop
[2025-07-26 05:23:51] 2025-07-26 12:23:39,012 | INFO     | all job control threads have been joined
[2025-07-26 05:23:51] 2025-07-26 12:23:39,071 | INFO     | all payload control threads have been joined
[2025-07-26 05:23:51] 2025-07-26 12:23:39,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:23:51] 2025-07-26 12:23:39,423 | INFO     | all data control threads have been joined
[2025-07-26 05:23:51] 2025-07-26 12:23:39,879 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:39,996 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:40,018 | INFO     | [job] control thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:40,077 | INFO     | [payload] control thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:40,264 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:40,345 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:40,429 | INFO     | [data] control thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:40,605 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,095 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,105 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:23:51] 2025-07-26 12:23:41,214 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,214 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,215 | INFO     | [job] validate thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,215 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:41,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:23:51] 2025-07-26 12:23:42,494 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:45,170 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:23:51] 2025-07-26 12:23:45,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445334771520)>', '<ExcThread(monitor, started 140444356835072)>']
[2025-07-26 05:23:51] 2025-07-26 12:23:45,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:23:51] 2025-07-26 12:23:45,927 | INFO     | [monitor] control thread has ended
[2025-07-26 05:23:51] 2025-07-26 12:23:50,462 | INFO     | all workflow threads have been joined
[2025-07-26 05:23:51] 2025-07-26 12:23:50,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:23:51] 2025-07-26 12:23:50,462 | INFO     | traces error code: 0
[2025-07-26 05:23:51] 2025-07-26 12:23:50,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:23:51] 2025-07-26 12:23:50,884 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:23:51] 2025-07-26 12:23:50,973 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:23:51] 2025-07-26 12:23:51,023 [wrapper] pilotpid: 4148557
[2025-07-26 05:23:51] 2025-07-26 12:23:51,029 [wrapper] Pilot exit status: 0
[2025-07-26 05:23:51] 2025-07-26 12:23:51,036 [wrapper] pandaids: 6745102690
[2025-07-26 05:23:51] 2025-07-26 12:23:51,078 [wrapper] cleanup supervisor_pilot 4148563 4148558
[2025-07-26 05:23:51] 2025-07-26 12:23:51,092 [wrapper] Test setup, not cleaning
[2025-07-26 05:23:51] 2025-07-26 12:23:51,094 [wrapper] apfmon messages muted
[2025-07-26 05:23:51] 2025-07-26 12:23:51,120 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:23:51] 2025-07-26 12:23:51,136 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:23:51]  *** Error codes and diagnostics ***
[2025-07-26 05:23:51]     "exeErrorCode": 65,
[2025-07-26 05:23:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 05:23:51]     "pilotErrorCode": 1305,
[2025-07-26 05:23:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-26 05:23:51]  *** Listing of results directory ***
[2025-07-26 05:23:51] total 145912
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc    530466 Jul 26 02:02 pilot3.tar.gz
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc      5112 Jul 26 02:06 queuedata.json
[2025-07-26 05:23:51] -rwx------. 1 boinc boinc     36292 Jul 26 02:06 runpilot2-wrapper.sh
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc       100 Jul 26 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:23:51] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 05:18 run_atlas
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc       105 Jul 26 05:18 job.xml
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc      6611 Jul 26 05:18 init_data.xml
[2025-07-26 05:23:51] -rw-r--r--. 2 boinc boinc 145332354 Jul 26 05:18 EVNT.45743347._002018.pool.root.1
[2025-07-26 05:23:51] -rw-r--r--. 2 boinc boinc     15095 Jul 26 05:18 start_atlas.sh
[2025-07-26 05:23:51] drwxrwx--x. 2 boinc boinc      4096 Jul 26 05:18 shared
[2025-07-26 05:23:51] -rw-r--r--. 2 boinc boinc    542894 Jul 26 05:18 input.tar.gz
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc         0 Jul 26 05:18 boinc_lockfile
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc      2563 Jul 26 05:18 pandaJob.out
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc    980117 Jul 26 05:19 agis_schedconf.cvmfs.json
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc   1593052 Jul 26 05:19 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:23:51] drwx------. 4 boinc boinc      4096 Jul 26 05:19 pilot3
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc       523 Jul 26 05:21 boinc_task_state.xml
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc       952 Jul 26 05:21 memory_monitor_summary.json
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc     21384 Jul 26 05:21 log.45743349._035470.job.log.tgz.1
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc        95 Jul 26 05:23 pilot_heartbeat.json
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc      8381 Jul 26 05:23 heartbeat.json
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc      8192 Jul 26 05:23 boinc_mmap_file
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc        22 Jul 26 05:23 wrapper_checkpoint.txt
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc      4479 Jul 26 05:23 pilotlog.txt
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc     81261 Jul 26 05:23 log.45743349._035470.job.log.1
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc       188 Jul 26 05:23 output.list
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc       620 Jul 26 05:23 runtime_log
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc    122880 Jul 26 05:23 result.tar.gz
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc      8650 Jul 26 05:23 runtime_log.err
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc       647 Jul 26 05:23 Ji4LDmj2pz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6jRLDmNUh2zm.diag
[2025-07-26 05:23:51] -rw-r--r--. 1 boinc boinc     21931 Jul 26 05:23 stderr.txt
[2025-07-26 05:23:51] No HITS result produced
[2025-07-26 05:23:51]  *** Contents of shared directory: ***
[2025-07-26 05:23:51] total 142596
[2025-07-26 05:23:51] -rw-r--r--. 2 boinc boinc 145332354 Jul 26 05:18 ATLAS.root_0
[2025-07-26 05:23:51] -rw-r--r--. 2 boinc boinc     15095 Jul 26 05:18 start_atlas.sh
[2025-07-26 05:23:51] -rw-r--r--. 2 boinc boinc    542894 Jul 26 05:18 input.tar.gz
[2025-07-26 05:23:51] -rw-------. 1 boinc boinc    122880 Jul 26 05:23 result.tar.gz
05:23:53 (4144985): run_atlas exited; CPU time 22.714039
05:23:53 (4144985): called boinc_finish(0)

</stderr_txt>
]]>

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