Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:38:12 (2323047): wrapper (7.7.26015): starting
11:38:12 (2323047): wrapper: running run_atlas (--nthreads 12)
[2025-07-28 11:38:12] Arguments: --nthreads 12
[2025-07-28 11:38:12] Threads: 12
[2025-07-28 11:38:12] Checking for CVMFS
[2025-07-28 11:38:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-28 11:38:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-28 11:38:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-28 11:38:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-28 11:38:16] 2.13.1.0 48702 8740 61828 148847 1 56 3094668 4096000 912 130560 0 5638382 99.898 686523 678 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-28 11:38:16] CVMFS is ok
[2025-07-28 11:38:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-28 11:38:16] Checking for apptainer binary...
[2025-07-28 11:38:16] apptainer is not installed, using version from CVMFS
[2025-07-28 11:38:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-28 11:38:18] g6400
[2025-07-28 11:38:18] apptainer works
[2025-07-28 11:38:18] Set ATHENA_PROC_NUMBER=12
[2025-07-28 11:38:18] Set ATHENA_CORE_NUMBER=12
[2025-07-28 11:38:18] Starting ATLAS job with PandaID=6745097876
[2025-07-28 11:38:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-28 17:38:47]  *** The last 200 lines of the pilot log: ***
[2025-07-28 17:38:47] 2025-07-28 17:38:31,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-28 17:38:47] 2025-07-28 17:38:31,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-28 17:38:47] 2025-07-28 17:38:31,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-28 17:38:47] 2025-07-28 17:38:31,999 | INFO     | fitting pss+swap vs Time
[2025-07-28 17:38:47] 2025-07-28 17:38:31,999 | INFO     | sum of square deviations: 13180331767.318037
[2025-07-28 17:38:47] 2025-07-28 17:38:32,005 | INFO     | sum of deviations: 27777742352.911137
[2025-07-28 17:38:47] 2025-07-28 17:38:32,005 | INFO     | mean x: 1753713619.6303725
[2025-07-28 17:38:47] 2025-07-28 17:38:32,005 | INFO     | mean y: 2659797.9140401147
[2025-07-28 17:38:47] 2025-07-28 17:38:32,005 | INFO     | -- intersect: -3693317355.5348186
[2025-07-28 17:38:47] 2025-07-28 17:38:32,005 | INFO     | intersect: -3693317355.5348186
[2025-07-28 17:38:47] 2025-07-28 17:38:32,006 | INFO     | chi2: 3.5759884041950034
[2025-07-28 17:38:47] 2025-07-28 17:38:32,006 | INFO     | sum of square deviations: 12621951185.302393
[2025-07-28 17:38:47] 2025-07-28 17:38:32,008 | INFO     | sum of deviations: 76564058431.41864
[2025-07-28 17:38:47] 2025-07-28 17:38:32,008 | INFO     | mean x: 1753713467.139535
[2025-07-28 17:38:47] 2025-07-28 17:38:32,008 | INFO     | mean y: 2673004.99127907
[2025-07-28 17:38:47] 2025-07-28 17:38:32,008 | INFO     | -- intersect: -10635255980.694326
[2025-07-28 17:38:47] 2025-07-28 17:38:32,008 | INFO     | intersect: -10635255980.694326
[2025-07-28 17:38:47] 2025-07-28 17:38:32,008 | INFO     | chi2: 2.032743613382743
[2025-07-28 17:38:47] 2025-07-28 17:38:32,012 | INFO     | current chi2=2.032743613382743 (change=43.15575489567794 %)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,013 | INFO     | sum of square deviations: 12079570903.2272
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | sum of deviations: 75071954851.41003
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | mean x: 1753713314.6489675
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | mean y: 2672585.457227139
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | -- intersect: -10896281345.470139
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | intersect: -10896281345.470139
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | chi2: 2.033350134412682
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | current chi2=2.033350134412682 (change=-0.029837556785125004 %)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,015 | INFO     | right removable region: 338
[2025-07-28 17:38:47] 2025-07-28 17:38:32,016 | INFO     | sum of square deviations: 12621816985.302393
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | sum of deviations: -42541819612.34883
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | mean x: 1753713772.139535
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | mean y: 2678911.944767442
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | -- intersect: 5913569161.179711
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | intersect: 5913569161.179711
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | chi2: 1.8828717099778518
[2025-07-28 17:38:47] 2025-07-28 17:38:32,022 | INFO     | current chi2=1.8828717099778518 (change=47.346817238863274 %)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,023 | INFO     | sum of square deviations: 12079302503.227198
[2025-07-28 17:38:47] 2025-07-28 17:38:32,024 | INFO     | sum of deviations: -59318691215.578156
[2025-07-28 17:38:47] 2025-07-28 17:38:32,024 | INFO     | mean x: 1753713924.6489675
[2025-07-28 17:38:47] 2025-07-28 17:38:32,024 | INFO     | mean y: 2683619.348082596
[2025-07-28 17:38:47] 2025-07-28 17:38:32,029 | INFO     | -- intersect: 8614771506.783545
[2025-07-28 17:38:47] 2025-07-28 17:38:32,029 | INFO     | intersect: 8614771506.783545
[2025-07-28 17:38:47] 2025-07-28 17:38:32,029 | INFO     | chi2: 1.7978452006050996
[2025-07-28 17:38:47] 2025-07-28 17:38:32,029 | INFO     | current chi2=1.7978452006050996 (change=4.515788777438927 %)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,029 | INFO     | left removable region: 20
[2025-07-28 17:38:47] 2025-07-28 17:38:32,030 | INFO     | sum of square deviations: 9970551008.78306
[2025-07-28 17:38:47] 2025-07-28 17:38:32,031 | INFO     | sum of deviations: -12781014290.773592
[2025-07-28 17:38:47] 2025-07-28 17:38:32,031 | INFO     | mean x: 1753713894.1792452
[2025-07-28 17:38:47] 2025-07-28 17:38:32,031 | INFO     | mean y: 2698011.610062893
[2025-07-28 17:38:47] 2025-07-28 17:38:32,031 | INFO     | -- intersect: 2250742510.222871
[2025-07-28 17:38:47] 2025-07-28 17:38:32,031 | INFO     | intersect: 2250742510.222871
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | chi2: 0.18080433082316255
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | -- intersect: 2250742510.222871
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | current memory leak: -1.28 B/s (using 318 data points, chi2=0.18)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | could have reported an average CPU frequency of 3999 MHz (15 samples)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | ..............................
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | . Timing measurements:
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | . get job = 0 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,032 | INFO     | . initial setup = 5 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,041 | INFO     | . payload setup = 68 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,041 | INFO     | . stage-in = 0 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,041 | INFO     | . payload execution = 21290 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,041 | INFO     | . stage-out = 1 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,041 | INFO     | . log creation = 0 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,041 | INFO     | ..............................
[2025-07-28 17:38:47] 2025-07-28 17:38:32,128 | INFO     | 
[2025-07-28 17:38:47] 2025-07-28 17:38:32,128 | INFO     | job summary report
[2025-07-28 17:38:47] 2025-07-28 17:38:32,128 | INFO     | --------------------------------------------------
[2025-07-28 17:38:47] 2025-07-28 17:38:32,128 | INFO     | PanDA job id: 6745097876
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | task id: 45743349
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | errors: (none)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | pilot state: finished 
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | transexitcode: 0
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | exeerrorcode: 0
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | exeerrordiag: 
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | exitcode: 0
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | exitmsg: OK
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | cpuconsumptiontime: 32601 s
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | nevents: 400
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | neventsw: 0
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | pid: 2333154
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | pgrp: 2333154
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | corecount: 12
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | event service: False
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | sizes: {0: 2397327, 1: 2397526, 12: 2397526, 22: 2397554, 33: 2397582, 44: 2397638, 46: 2398056, 55: 2398084, 21362: 2431870, 21365: 2435404, 21421: 2435542}
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | --------------------------------------------------
[2025-07-28 17:38:47] 2025-07-28 17:38:32,129 | INFO     | 
[2025-07-28 17:38:47] 2025-07-28 17:38:32,130 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | job 6745097876 has completed (purged errors)
[2025-07-28 17:38:47] 2025-07-28 17:38:32,146 | INFO     | overall cleanup function is called
[2025-07-28 17:38:47] 2025-07-28 17:38:33,157 | INFO     | --- collectZombieJob: --- 10, [2333154]
[2025-07-28 17:38:47] 2025-07-28 17:38:33,157 | INFO     | zombie collector waiting for pid 2333154
[2025-07-28 17:38:47] 2025-07-28 17:38:33,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-28 17:38:47] 2025-07-28 17:38:33,157 | INFO     | collected zombie processes
[2025-07-28 17:38:47] 2025-07-28 17:38:33,157 | INFO     | will attempt to kill all subprocesses of pid=2333154
[2025-07-28 17:38:47] 2025-07-28 17:38:33,258 | INFO     | process IDs to be killed: [2333154] (in reverse order)
[2025-07-28 17:38:47] 2025-07-28 17:38:33,329 | WARNING  | found no corresponding commands to process id(s)
[2025-07-28 17:38:47] 2025-07-28 17:38:33,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-28 17:38:47] 2025-07-28 17:38:33,330 | INFO     | did not find any defunct processes belonging to 2333154
[2025-07-28 17:38:47] 2025-07-28 17:38:33,331 | INFO     | did not find any defunct processes belonging to 2333154
[2025-07-28 17:38:47] 2025-07-28 17:38:33,331 | INFO     | ready for new job
[2025-07-28 17:38:47] 2025-07-28 17:38:33,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-28 17:38:47] 2025-07-28 17:38:33,332 | INFO     | ***************************************
[2025-07-28 17:38:47] 2025-07-28 17:38:33,332 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-28 17:38:47] 2025-07-28 17:38:33,332 | INFO     | ***************************************
[2025-07-28 17:38:47] 2025-07-28 17:38:33,332 | INFO     | 
[2025-07-28 17:38:47] 2025-07-28 17:38:33,365 | INFO     | architecture information:
[2025-07-28 17:38:47] 2025-07-28 17:38:33,365 | INFO     | executing command: cat /etc/os-release
[2025-07-28 17:38:47] 2025-07-28 17:38:33,397 | INFO     | cat /etc/os-release:
[2025-07-28 17:38:47] NAME="CentOS Linux"
[2025-07-28 17:38:47] VERSION="7 (Core)"
[2025-07-28 17:38:47] ID="centos"
[2025-07-28 17:38:47] ID_LIKE="rhel fedora"
[2025-07-28 17:38:47] VERSION_ID="7"
[2025-07-28 17:38:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-28 17:38:47] ANSI_COLOR="0;31"
[2025-07-28 17:38:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-28 17:38:47] HOME_URL="https://www.centos.org/"
[2025-07-28 17:38:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-28 17:38:47] 
[2025-07-28 17:38:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-28 17:38:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-28 17:38:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-28 17:38:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-28 17:38:47] 
[2025-07-28 17:38:47] 2025-07-28 17:38:33,397 | INFO     | ***************************************
[2025-07-28 17:38:47] 2025-07-28 17:38:33,900 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-28 17:38:47] 2025-07-28 17:38:33,969 | INFO     | sufficient remaining disk space (199844954112 B)
[2025-07-28 17:38:47] 2025-07-28 17:38:33,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-28 17:38:47] 2025-07-28 17:38:33,969 | INFO     | current server update state: UPDATING_FINAL
[2025-07-28 17:38:47] 2025-07-28 17:38:33,969 | INFO     | update_server=False
[2025-07-28 17:38:47] 2025-07-28 17:38:33,969 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-28 17:38:47] 2025-07-28 17:38:33,969 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-28 17:38:47] 2025-07-28 17:38:33,970 | INFO     | found 0 job(s) in 20 queues
[2025-07-28 17:38:47] 2025-07-28 17:38:33,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-28 17:38:47] 2025-07-28 17:38:33,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-28 17:38:47] 2025-07-28 17:38:33,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:38:47] 2025-07-28 17:38:34,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-28 17:38:47] 2025-07-28 17:38:34,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-28 17:38:47] 2025-07-28 17:38:34,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-28 17:38:47] 2025-07-28 17:38:34,077 | INFO     | will abort loop
[2025-07-28 17:38:47] 2025-07-28 17:38:34,405 | INFO     | all job control threads have been joined
[2025-07-28 17:38:47] 2025-07-28 17:38:34,475 | INFO     | all data control threads have been joined
[2025-07-28 17:38:47] 2025-07-28 17:38:34,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-28 17:38:47] 2025-07-28 17:38:34,637 | INFO     | all payload control threads have been joined
[2025-07-28 17:38:47] 2025-07-28 17:38:34,973 | INFO     | [job] retrieve thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:34,973 | INFO     | [job] queue monitor thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,085 | INFO     | [job] job monitor thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,386 | INFO     | [payload] validate_pre thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,386 | INFO     | [job] validate thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,409 | INFO     | [job] control thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,477 | INFO     | [data] control thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,641 | INFO     | [payload] control thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:35,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:36,077 | INFO     | [payload] validate_post thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:36,257 | INFO     | [data] copytool_in thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:36,317 | INFO     | [job] create_data_payload thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:36,385 | INFO     | [payload] failed_post thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:36,473 | INFO     | [payload] execute_payloads thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:36,589 | INFO     | [data] copytool_out thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:37,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-28 17:38:47] 2025-07-28 17:38:41,089 | INFO     | [data] queue_monitor thread has finished
[2025-07-28 17:38:47] 2025-07-28 17:38:41,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840100943680)>', '<ExcThread(monitor, started 139839437534976)>']
[2025-07-28 17:38:47] 2025-07-28 17:38:42,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-28 17:38:47] 2025-07-28 17:38:42,017 | INFO     | [monitor] control thread has ended
[2025-07-28 17:38:47] 2025-07-28 17:38:46,421 | INFO     | all workflow threads have been joined
[2025-07-28 17:38:47] 2025-07-28 17:38:46,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-28 17:38:47] 2025-07-28 17:38:46,421 | INFO     | traces error code: 0
[2025-07-28 17:38:47] 2025-07-28 17:38:46,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-28 17:38:47] 2025-07-28 17:38:46,782 [wrapper] ==== pilot stdout END ====
[2025-07-28 17:38:47] 2025-07-28 17:38:46,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-28 17:38:47] 2025-07-28 17:38:46,857 [wrapper] pilotpid: 2326645
[2025-07-28 17:38:47] 2025-07-28 17:38:46,893 [wrapper] Pilot exit status: 0
[2025-07-28 17:38:47] 2025-07-28 17:38:47,001 [wrapper] pandaids: 6745097876
[2025-07-28 17:38:47] 2025-07-28 17:38:47,101 [wrapper] cleanup supervisor_pilot 2416056 2326646
[2025-07-28 17:38:47] 2025-07-28 17:38:47,133 [wrapper] Test setup, not cleaning
[2025-07-28 17:38:47] 2025-07-28 17:38:47,181 [wrapper] apfmon messages muted
[2025-07-28 17:38:47] 2025-07-28 17:38:47,229 [wrapper] ==== wrapper stdout END ====
[2025-07-28 17:38:47] 2025-07-28 17:38:47,273 [wrapper] ==== wrapper stderr END ====
[2025-07-28 17:38:47]  *** Error codes and diagnostics ***
[2025-07-28 17:38:47]     "exeErrorCode": 0,
[2025-07-28 17:38:47]     "exeErrorDiag": "",
[2025-07-28 17:38:47]     "pilotErrorCode": 0,
[2025-07-28 17:38:47]     "pilotErrorDiag": "",
[2025-07-28 17:38:47]  *** Listing of results directory ***
[2025-07-28 17:38:47] total 351996
[2025-07-28 17:38:47] -rw-r--r-- 1 boinc boinc    530466 Jul 26 05:25 pilot3.tar.gz
[2025-07-28 17:38:47] -rwx------ 1 boinc boinc     36292 Jul 26 05:51 runpilot2-wrapper.sh
[2025-07-28 17:38:47] -rw-r--r-- 1 boinc boinc      5112 Jul 26 05:51 queuedata.json
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc       100 Jul 28 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-28 17:38:47] -rwxr-xr-x 1 boinc boinc      7986 Jul 28 11:38 run_atlas
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc       105 Jul 28 11:38 job.xml
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc      9441 Jul 28 11:38 init_data.xml
[2025-07-28 17:38:47] -rw-r--r-- 2 boinc boinc 145670389 Jul 28 11:38 EVNT.45743347._001867.pool.root.1
[2025-07-28 17:38:47] drwxrwx--x 2 boinc boinc      4096 Jul 28 11:38 shared
[2025-07-28 17:38:47] -rw-r--r-- 2 boinc boinc    542890 Jul 28 11:38 input.tar.gz
[2025-07-28 17:38:47] -rw-r--r-- 2 boinc boinc     15095 Jul 28 11:38 start_atlas.sh
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc         0 Jul 28 11:38 boinc_lockfile
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc      2563 Jul 28 11:38 pandaJob.out
[2025-07-28 17:38:47] -rw------- 1 boinc boinc    978452 Jul 28 11:39 agis_schedconf.cvmfs.json
[2025-07-28 17:38:47] drwx------ 4 boinc boinc      4096 Jul 28 11:39 pilot3
[2025-07-28 17:38:47] -rw------- 1 boinc boinc 205823914 Jul 28 17:36 HITS.45743349._033078.pool.root.1
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc       530 Jul 28 17:36 boinc_task_state.xml
[2025-07-28 17:38:47] -rw------- 1 boinc boinc      1024 Jul 28 17:37 memory_monitor_summary.json
[2025-07-28 17:38:47] -rw------- 1 boinc boinc   1589827 Jul 28 17:37 agis_ddmendpoints.agis.ALL.json
[2025-07-28 17:38:47] -rw------- 1 boinc boinc    509745 Jul 28 17:37 log.45743349._033078.job.log.tgz.1
[2025-07-28 17:38:47] -rw------- 1 boinc boinc        95 Jul 28 17:37 pilot_heartbeat.json
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc      8192 Jul 28 17:38 boinc_mmap_file
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc        28 Jul 28 17:38 wrapper_checkpoint.txt
[2025-07-28 17:38:47] -rw------- 1 boinc boinc      7768 Jul 28 17:38 heartbeat.json
[2025-07-28 17:38:47] -rw------- 1 boinc boinc      4690 Jul 28 17:38 pilotlog.txt
[2025-07-28 17:38:47] -rw------- 1 boinc boinc   2023941 Jul 28 17:38 log.45743349._033078.job.log.1
[2025-07-28 17:38:47] -rw------- 1 boinc boinc       357 Jul 28 17:38 output.list
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc       620 Jul 28 17:38 runtime_log
[2025-07-28 17:38:47] -rw------- 1 boinc boinc   2549760 Jul 28 17:38 result.tar.gz
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc      8958 Jul 28 17:38 runtime_log.err
[2025-07-28 17:38:47] -rw------- 1 boinc boinc       652 Jul 28 17:38 gsZKDmB0mz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXD0KDmBmDW4n.diag
[2025-07-28 17:38:47] -rw-rw-r-- 1 boinc boinc     20744 Jul 28 17:38 stderr.txt
[2025-07-28 17:38:48] HITS file was successfully produced:
[2025-07-28 17:38:48] -rw------- 1 boinc boinc 205823914 Jul 28 17:36 shared/HITS.pool.root.1
[2025-07-28 17:38:48]  *** Contents of shared directory: ***
[2025-07-28 17:38:48] total 346308
[2025-07-28 17:38:48] -rw-r--r-- 2 boinc boinc 145670389 Jul 28 11:38 ATLAS.root_0
[2025-07-28 17:38:48] -rw-r--r-- 2 boinc boinc    542890 Jul 28 11:38 input.tar.gz
[2025-07-28 17:38:48] -rw-r--r-- 2 boinc boinc     15095 Jul 28 11:38 start_atlas.sh
[2025-07-28 17:38:48] -rw------- 1 boinc boinc 205823914 Jul 28 17:36 HITS.pool.root.1
[2025-07-28 17:38:48] -rw------- 1 boinc boinc   2549760 Jul 28 17:38 result.tar.gz
17:38:50 (2323047): run_atlas exited; CPU time 32675.233013
17:38:50 (2323047): called boinc_finish(0)

</stderr_txt>
]]>

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