Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-26 06:29:05 (4748): Detected: vboxwrapper 26206
2025-07-26 06:29:05 (4748): Detected: BOINC client v8.0.2
2025-07-26 06:29:06 (4748): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-07-26 06:29:06 (4748): Successfully copied 'init_data.xml' to the shared directory.
2025-07-26 06:29:07 (4748): Create VM. (boinc_e43e4dd4da184da9, slot#2)
2025-07-26 06:29:08 (4748): Setting Memory Size for VM. (4400MB)
2025-07-26 06:29:08 (4748): Setting CPU Count for VM. (4)
2025-07-26 06:29:08 (4748): Setting Chipset Options for VM.
2025-07-26 06:29:09 (4748): Setting Graphics Controller Options for VM.
2025-07-26 06:29:09 (4748): Setting Boot Options for VM.
2025-07-26 06:29:09 (4748): Setting Network Configuration for NAT.
2025-07-26 06:29:10 (4748): Enabling VM Network Access.
2025-07-26 06:29:10 (4748): Disabling USB Support for VM.
2025-07-26 06:29:10 (4748): Disabling COM Port Support for VM.
2025-07-26 06:29:10 (4748): Disabling LPT Port Support for VM.
2025-07-26 06:29:11 (4748): Disabling Audio Support for VM.
2025-07-26 06:29:11 (4748): Disabling Clipboard Support for VM.
2025-07-26 06:29:11 (4748): Disabling Drag and Drop Support for VM.
2025-07-26 06:29:12 (4748): Adding storage controller(s) to VM.
2025-07-26 06:29:12 (4748): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-26 06:29:15 (4748): Adding VirtualBox Guest Additions to VM.
2025-07-26 06:29:16 (4748): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-26 06:29:16 (4748): forwarding host port 58260 to guest port 80
2025-07-26 06:29:16 (4748): Enabling remote desktop for VM.
2025-07-26 06:29:17 (4748): Required extension pack not installed, remote desktop not enabled.
2025-07-26 06:29:17 (4748): Enabling shared directory for VM.
2025-07-26 06:29:18 (4748): Starting VM using VBoxManage interface. (boinc_e43e4dd4da184da9, slot#2)
2025-07-26 06:29:29 (4748): Successfully started VM. (PID = '1136')
2025-07-26 06:29:29 (4748): Reporting VM Process ID to BOINC.
2025-07-26 06:29:29 (4748): Guest Log: BIOS: VirtualBox 7.1.6
2025-07-26 06:29:29 (4748): Guest Log: CPUID EDX: 0x178bfbff
2025-07-26 06:29:29 (4748): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-26 06:29:29 (4748): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-26 06:29:29 (4748): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-26 06:29:29 (4748): Detected: Web Application Enabled (http://localhost:58260)
2025-07-26 06:29:29 (4748): Preference change detected
2025-07-26 06:29:29 (4748): Setting CPU throttle for VM. (100%)
2025-07-26 06:29:29 (4748): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-26 06:29:31 (4748): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-26 06:29:31 (4748): Guest Log: BIOS: Booting from Hard Disk...
2025-07-26 06:29:35 (4748): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-26 06:29:35 (4748): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-26 06:29:35 (4748): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-26 06:29:48 (4748): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-26 06:29:48 (4748): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-26 06:30:15 (4748): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000261 main     Log opened 2025-07-26T06:30:12.671932000Z
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000592 main     OS Product: Linux
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000729 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000816 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000940 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000943 main     Process ID: 1330
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.000945 main     Package type: LINUX_64BITS_GENERIC
2025-07-26 06:30:15 (4748): Guest Log: 00:00:00.002986 main     5.2.32 r132073 started. Verbose level = 0
2025-07-26 06:30:15 (4748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-26 06:30:15 (4748): Guest Log: [INFO] Mounting shared directory
2025-07-26 06:30:15 (4748): Guest Log: [INFO] Checking for init_data.xml
2025-07-26 06:30:25 (4748): Guest Log: 00:00:10.008366 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 656 625 000ns (GuestNow=1 753 529 424 335 138 000 ns GuestLast=1 753 511 412 678 513 000 ns fSetTimeLastLoop=true )
2025-07-26 06:30:29 (4748): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-26 06:30:29 (4748): Guest Log: [INFO] Detected branch: prod
2025-07-26 06:30:30 (4748): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-26 06:30:30 (4748): Guest Log: Copying input files
2025-07-26 06:30:36 (4748): Guest Log: Copied input files into RunAtlas.
2025-07-26 06:30:36 (4748): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-26 06:30:36 (4748): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-26 06:30:36 (4748): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-26 06:30:36 (4748): Guest Log: Further information can be found at the LHC@home message board.
2025-07-26 06:30:47 (4748): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-26 06:30:49 (4748): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-26 06:30:49 (4748): Guest Log: 2.6.3.0 1613 0 30180 148776 3 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-26 06:30:52 (4748): Guest Log: copied the webapp to /var/www
2025-07-26 06:30:52 (4748): Guest Log: ATHENA_PROC_NUMBER=4
2025-07-26 06:30:52 (4748): Guest Log: ATHENA_CORE_NUMBER=4
2025-07-26 06:30:52 (4748): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-26 06:30:52 (4748): Guest Log:  *** Starting ATLAS job. (PandaID=6745100131 taskID=45743349) ***
2025-07-26 08:13:27 (4748): Status Report: Elapsed Time: '6000.949488'
2025-07-26 08:13:28 (4748): Status Report: CPU Time: '17270.140625'
2025-07-26 10:02:12 (4748): Status Report: Elapsed Time: '12001.056717'
2025-07-26 10:02:12 (4748): Status Report: CPU Time: '43182.171875'
2025-07-26 11:49:05 (4748): Status Report: Elapsed Time: '18005.231712'
2025-07-26 11:49:19 (4748): Status Report: CPU Time: '68645.046875'
2025-07-26 13:36:20 (4748): Status Report: Elapsed Time: '24006.195778'
2025-07-26 13:36:20 (4748): Status Report: CPU Time: '94162.812500'
2025-07-26 15:24:01 (4748): Status Report: Elapsed Time: '30007.994011'
2025-07-26 15:24:10 (4748): Status Report: CPU Time: '119831.515625'
2025-07-26 15:37:58 (4748): Guest Log:  *** Job finished ***
2025-07-26 15:37:58 (4748): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:40,434 | INFO     | all workflow threads have been joined
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:40,434 | INFO     | end of generic workflow (traces error code: 0)
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:40,434 | INFO     | traces error code: 0
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:40,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,354 | INFO     | PID=5952 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,358 | INFO     | found 0 job(s) in 20 queues
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,360 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,360 | INFO     | [monitor] control thread has ended
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,768 [wrapper] ==== pilot stdout END ====
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,779 [wrapper] ==== wrapper stdout RESUME ====
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,847 [wrapper] pilotpid: 5952
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:55,921 [wrapper] Pilot exit status: 0
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:56,243 [wrapper] pandaids: 6745100131
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:56,388 [wrapper] cleanup supervisor_pilot  9010 5953
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:56,417 [wrapper] Test setup, not cleaning
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:56,573 [wrapper] apfmon messages muted
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:56,612 [wrapper] ==== wrapper stdout END ====
2025-07-26 15:37:58 (4748): Guest Log: 2025-07-26 20:37:56,633 [wrapper] ==== wrapper stderr END ====
2025-07-26 15:37:58 (4748): Guest Log:  *** Error codes and diagnostics ***
2025-07-26 15:37:58 (4748): Guest Log:     "exeErrorCode": 0,
2025-07-26 15:37:58 (4748): Guest Log:     "exeErrorDiag": "",
2025-07-26 15:37:58 (4748): Guest Log:     "pilotErrorCode": 0,
2025-07-26 15:37:58 (4748): Guest Log:     "pilotErrorDiag": "",
2025-07-26 15:37:58 (4748): Guest Log:  *** Listing of results directory ***
2025-07-26 15:37:58 (4748): Guest Log: total 218288
2025-07-26 15:37:58 (4748): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 26 08:04 pilot3.tar.gz
2025-07-26 15:37:58 (4748): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 26 08:18 queuedata.json
2025-07-26 15:37:58 (4748): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 26 08:19 runpilot2-wrapper.sh
2025-07-26 15:37:58 (4748): Guest Log: -rwxr-xr-x. 1 atlas atlas      9337 Jul 26 11:30 init_data.xml
2025-07-26 15:37:58 (4748): Guest Log: -rwxr-xr-x. 1 atlas atlas    542895 Jul 26 11:30 input.tar.gz
2025-07-26 15:37:58 (4748): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 26 11:30 start_atlas.sh
2025-07-26 15:37:58 (4748): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 11:30 EVNT.45743347._001970.pool.root.1 -> /data/./ATLAS.root_0
2025-07-26 15:37:58 (4748): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Jul 26 11:30 pandaJob.out
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas    980117 Jul 26 11:32 agis_schedconf.cvmfs.json
2025-07-26 15:37:58 (4748): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 11:33 pilot3
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas 213576828 Jul 26 20:34 HITS.45743349._034751.pool.root.1
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas      1030 Jul 26 20:36 memory_monitor_summary.json
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 26 20:36 agis_ddmendpoints.agis.ALL.json
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas    477697 Jul 26 20:36 log.45743349._034751.job.log.tgz.1
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas      7797 Jul 26 20:37 heartbeat.json
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas        95 Jul 26 20:37 pilot_heartbeat.json
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas       744 Jul 26 20:37 pilotlog.txt
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas   2593990 Jul 26 20:37 log.45743349._034751.job.log.1
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas       357 Jul 26 20:37 output.list
2025-07-26 15:37:58 (4748): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 26 20:37 runtime_log
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas   3092480 Jul 26 20:37 result.tar.gz
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas       654 Jul 26 20:37 XAOKDm6Ipz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdS0KDmGt6cxn.diag
2025-07-26 15:37:58 (4748): Guest Log: -rw-r--r--. 1 atlas atlas      8572 Jul 26 20:37 runtime_log.err
2025-07-26 15:37:58 (4748): Guest Log: Looking for outputfile HITS.45743349._034751.pool.root.1
2025-07-26 15:37:58 (4748): Guest Log: HITS file was successfully produced
2025-07-26 15:37:58 (4748): Guest Log: -rw-------. 1 atlas atlas 213576828 Jul 26 20:34 /home/atlas/RunAtlas/HITS.45743349._034751.pool.root.1
2025-07-26 15:38:05 (4748): Guest Log: Successfully finished the ATLAS job!
2025-07-26 15:38:05 (4748): Guest Log: Copying the results back to the shared directory!
2025-07-26 15:38:05 (4748): Guest Log:  *** Contents of shared directory: ***
2025-07-26 15:38:05 (4748): Guest Log: total 355300
2025-07-26 15:38:05 (4748): Guest Log: -rwxrwxrwx. 1 root root 146583526 Jul 26 11:29 ATLAS.root_0
2025-07-26 15:38:05 (4748): Guest Log: -rwxrwxrwx. 1 root root 213576828 Jul 26 20:38 HITS.pool.root.1
2025-07-26 15:38:05 (4748): Guest Log: -rwxrwxrwx. 1 root root      9337 Jul 26 11:29 init_data.xml
2025-07-26 15:38:05 (4748): Guest Log: -rwxrwxrwx. 1 root root    542895 Jul 26 10:59 input.tar.gz
2025-07-26 15:38:05 (4748): Guest Log: -rwxrwxrwx. 1 root root   3092480 Jul 26 20:38 result.tar.gz
2025-07-26 15:38:05 (4748): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 26 10:59 start_atlas.sh
2025-07-26 15:38:05 (4748): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-26 15:38:05 (4748): VM Completion File Detected.
2025-07-26 15:38:05 (4748): Powering off VM.
2025-07-26 15:38:08 (4748): Successfully stopped VM.
2025-07-26 15:38:08 (4748): Deregistering VM. (boinc_e43e4dd4da184da9, slot#2)
2025-07-26 15:38:08 (4748): Removing network bandwidth throttle group from VM.
2025-07-26 15:38:08 (4748): Removing VM from VirtualBox.
15:38:14 (4748): called boinc_finish(0)

</stderr_txt>
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