Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:57:31 (3304957): wrapper (7.7.26015): starting
06:57:31 (3304957): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 06:57:31] Arguments: --nthreads 8
[2025-07-26 06:57:31] Threads: 8
[2025-07-26 06:57:31] Checking for CVMFS
[2025-07-26 06:57:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:57:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:57:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:57:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:57:31] 2.12.6.0 1643581 16850 263316 148774 2 460 38590346 40960000 14154 16776704 1 89722401 99.688 116580163 19999 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 06:57:31] CVMFS is ok
[2025-07-26 06:57:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:57:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:57:31] Further information can be found at the LHC@home message board.
[2025-07-26 06:57:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:57:31] Checking for apptainer binary...
[2025-07-26 06:57:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:57:31] Running /usr/bin/apptainer --version
[2025-07-26 06:57:31] apptainer version 1.4.1-1.el9
[2025-07-26 06:57:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:57:32] c7-3-35.aglt2.org
[2025-07-26 06:57:32] apptainer works
[2025-07-26 06:57:32] Set ATHENA_PROC_NUMBER=8
[2025-07-26 06:57:32] Set ATHENA_CORE_NUMBER=8
[2025-07-26 06:57:32] Starting ATLAS job with PandaID=6745093179
[2025-07-26 06:57:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 08:16:49]  *** The last 200 lines of the pilot log: ***
[2025-07-26 08:16:49]  scope=mc23_13p6TeV
[2025-07-26 08:16:49]  status=None
[2025-07-26 08:16:49]  status_code=0
[2025-07-26 08:16:49]  storage_token=
[2025-07-26 08:16:49]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6745093179/log.45743349._030392.job.log.tgz.1
[2025-07-26 08:16:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/2c/log.45743349._030392.job.log.tgz.1
[2025-07-26 08:16:49]  workdir=None
[2025-07-26 08:16:49] ]
[2025-07-26 08:16:49] 2025-07-26 12:16:07,023 | INFO     | transferring file log.45743349._030392.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6745093179/log.45743349._030392.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 08:16:49] 2025-07-26 12:16:07,023 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6745093179/log.45743349._030392.job.log.tgz.1 /tmp/boinchome/slots/2/log.45743349._030392.job
[2025-07-26 08:16:49] 2025-07-26 12:16:07,047 | INFO     | adding to output.list: log.45743349._030392.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/2c/log.45743349._030392.job.log.tg
[2025-07-26 08:16:49] 2025-07-26 12:16:07,047 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 08:16:49] 2025-07-26 12:16:07,047 | INFO     | summary of transferred files:
[2025-07-26 08:16:49] 2025-07-26 12:16:07,047 | INFO     |  -- lfn=log.45743349._030392.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 08:16:49] 2025-07-26 12:16:07,048 | INFO     | stage-out finished correctly
[2025-07-26 08:16:49] 2025-07-26 12:16:08,112 | INFO     | monitor loop #342: job 0:6745093179 is in state 'finished'
[2025-07-26 08:16:49] 2025-07-26 12:16:08,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 08:16:49] 2025-07-26 12:16:08,736 | INFO     | PID=3308542 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 08:16:49] 2025-07-26 12:16:08,736 | INFO     | .. there are 35 such processes running
[2025-07-26 08:16:49] 2025-07-26 12:16:09,196 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 08:16:49] 2025-07-26 12:16:10,616 | INFO     | monitor loop #343: job 0:6745093179 is in state 'finished'
[2025-07-26 08:16:49] 2025-07-26 12:16:10,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 08:16:49] 2025-07-26 12:16:11,481 | INFO     | job 6745093179 has state=finished
[2025-07-26 08:16:49] 2025-07-26 12:16:11,481 | INFO     | preparing for final server update for job 6745093179 in state='finished'
[2025-07-26 08:16:49] 2025-07-26 12:16:11,481 | INFO     | this job has now completed (state=finished)
[2025-07-26 08:16:49] 2025-07-26 12:16:11,483 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 08:16:49] 2025-07-26 12:16:11,483 | INFO     | log transfer has been attempted: DONE
[2025-07-26 08:16:49] 2025-07-26 12:16:11,483 | INFO     | job 6745093179 has finished - writing final server update
[2025-07-26 08:16:49] 2025-07-26 12:16:11,484 | INFO     | total number of processed events: 400 (read)
[2025-07-26 08:16:49] 2025-07-26 12:16:11,486 | INFO     | executing command: lscpu
[2025-07-26 08:16:49] 2025-07-26 12:16:11,562 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 08:16:49] 2025-07-26 12:16:13,120 | INFO     | monitor loop #344: job 0:6745093179 is in state 'finished'
[2025-07-26 08:16:49] 2025-07-26 12:16:13,121 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 08:16:49] 2025-07-26 12:16:15,624 | INFO     | monitor loop #345: job 0:6745093179 is in state 'finished'
[2025-07-26 08:16:49] 2025-07-26 12:16:15,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,211 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 08:16:49] 2025-07-26 12:16:17,218 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3099.9840104166656
[2025-07-26 08:16:49] 2025-07-26 12:16:17,232 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745093179/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,232 | INFO     | extracted standard info from prmon json
[2025-07-26 08:16:49] 2025-07-26 12:16:17,233 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 08:16:49] 2025-07-26 12:16:17,233 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 08:16:49] 2025-07-26 12:16:17,233 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 08:16:49] 2025-07-26 12:16:17,233 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 08:16:49] 2025-07-26 12:16:17,234 | INFO     | fitting pss+swap vs Time
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | sum of square deviations: 106336877.5
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | sum of deviations: -3344628048.0
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | mean x: 1753529911.5
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | mean y: 2204409.057142857
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | -- intersect: 55156215537.60338
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | intersect: 55156215537.60338
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | chi2: 0.10926078790160759
[2025-07-26 08:16:49] 2025-07-26 12:16:17,235 | INFO     | -- intersect: 55156215537.60338
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | current memory leak: -31.45 B/s (using 70 data points, chi2=0.11)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | could have reported an average CPU frequency of 3071 MHz (6 samples)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | ..............................
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . Timing measurements:
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . get job = 0 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . initial setup = 3 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . payload setup = 10 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . stage-in = 0 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . payload execution = 4666 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . stage-out = 0 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | . log creation = 0 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,236 | INFO     | ..............................
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | 
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | job summary report
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | --------------------------------------------------
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | PanDA job id: 6745093179
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | task id: 45743349
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | errors: (none)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | pilot state: finished 
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | transexitcode: 0
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | exeerrorcode: 0
[2025-07-26 08:16:49] 2025-07-26 12:16:17,306 | INFO     | exeerrordiag: 
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | exitcode: 0
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | exitmsg: OK
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | cpuconsumptiontime: 34241 s
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | nevents: 400
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | neventsw: 0
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | pid: 3319790
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | pgrp: 3319790
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | corecount: 8
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | event service: False
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | sizes: {0: 2396647, 1: 2397503, 7: 2397765, 12: 2397793, 4680: 2423849, 4682: 2432847, 4684: 2433031, 4692: 2433225}
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | --------------------------------------------------
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | 
[2025-07-26 08:16:49] 2025-07-26 12:16:17,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 08:16:49] 2025-07-26 12:16:17,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | job 6745093179 has completed (purged errors)
[2025-07-26 08:16:49] 2025-07-26 12:16:17,330 | INFO     | overall cleanup function is called
[2025-07-26 08:16:49] 2025-07-26 12:16:18,338 | INFO     | --- collectZombieJob: --- 10, [3319790]
[2025-07-26 08:16:49] 2025-07-26 12:16:18,339 | INFO     | zombie collector waiting for pid 3319790
[2025-07-26 08:16:49] 2025-07-26 12:16:18,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 08:16:49] 2025-07-26 12:16:18,339 | INFO     | collected zombie processes
[2025-07-26 08:16:49] 2025-07-26 12:16:18,339 | INFO     | will attempt to kill all subprocesses of pid=3319790
[2025-07-26 08:16:49] 2025-07-26 12:16:18,755 | INFO     | process IDs to be killed: [3319790] (in reverse order)
[2025-07-26 08:16:49] 2025-07-26 12:16:18,905 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 08:16:49] 2025-07-26 12:16:18,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 08:16:49] 2025-07-26 12:16:18,923 | INFO     | did not find any defunct processes belonging to 3319790
[2025-07-26 08:16:49] 2025-07-26 12:16:18,941 | INFO     | did not find any defunct processes belonging to 3319790
[2025-07-26 08:16:49] 2025-07-26 12:16:18,942 | INFO     | ready for new job
[2025-07-26 08:16:49] 2025-07-26 12:16:18,942 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 08:16:49] 2025-07-26 12:16:18,943 | INFO     | ***************************************
[2025-07-26 08:16:49] 2025-07-26 12:16:18,943 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 08:16:49] 2025-07-26 12:16:18,943 | INFO     | ***************************************
[2025-07-26 08:16:49] 2025-07-26 12:16:18,943 | INFO     | 
[2025-07-26 08:16:49] 2025-07-26 12:16:18,960 | INFO     | architecture information:
[2025-07-26 08:16:49] 2025-07-26 12:16:18,961 | INFO     | executing command: cat /etc/os-release
[2025-07-26 08:16:49] 2025-07-26 12:16:18,976 | INFO     | cat /etc/os-release:
[2025-07-26 08:16:49] NAME="CentOS Linux"
[2025-07-26 08:16:49] VERSION="7 (Core)"
[2025-07-26 08:16:49] ID="centos"
[2025-07-26 08:16:49] ID_LIKE="rhel fedora"
[2025-07-26 08:16:49] VERSION_ID="7"
[2025-07-26 08:16:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 08:16:49] ANSI_COLOR="0;31"
[2025-07-26 08:16:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 08:16:49] HOME_URL="https://www.centos.org/"
[2025-07-26 08:16:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 08:16:49] 
[2025-07-26 08:16:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 08:16:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 08:16:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 08:16:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 08:16:49] 
[2025-07-26 08:16:49] 2025-07-26 12:16:18,977 | INFO     | ***************************************
[2025-07-26 08:16:49] 2025-07-26 12:16:19,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 08:16:49] 2025-07-26 12:16:19,499 | INFO     | sufficient remaining disk space (128908787712 B)
[2025-07-26 08:16:49] 2025-07-26 12:16:19,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 08:16:49] 2025-07-26 12:16:19,499 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 08:16:49] 2025-07-26 12:16:19,499 | INFO     | update_server=False
[2025-07-26 08:16:49] 2025-07-26 12:16:19,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 08:16:49] 2025-07-26 12:16:19,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 08:16:49] 2025-07-26 12:16:19,500 | INFO     | aborting loop
[2025-07-26 08:16:49] 2025-07-26 12:16:19,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 08:16:49] 2025-07-26 12:16:20,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 08:16:49] 2025-07-26 12:16:20,336 | INFO     | all payload control threads have been joined
[2025-07-26 08:16:49] 2025-07-26 12:16:20,347 | INFO     | all data control threads have been joined
[2025-07-26 08:16:49] 2025-07-26 12:16:20,504 | INFO     | [job] retrieve thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,506 | INFO     | [job] job monitor thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,513 | INFO     | [payload] failed_post thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,581 | INFO     | [data] copytool_in thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,796 | INFO     | [payload] validate_post thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,805 | INFO     | all job control threads have been joined
[2025-07-26 08:16:49] 2025-07-26 12:16:20,824 | INFO     | [job] validate thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,849 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,857 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:20,956 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:21,342 | INFO     | [payload] control thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:21,352 | INFO     | [data] control thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:21,810 | INFO     | [job] control thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:22,149 | INFO     | [data] copytool_out thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:22,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 08:16:49] 2025-07-26 12:16:23,320 | INFO     | [job] queue monitor thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:23,785 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:30,203 | INFO     | job.realtimelogging is not enabled
[2025-07-26 08:16:49] 2025-07-26 12:16:31,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 08:16:49] 2025-07-26 12:16:32,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701955012416)>', '<ExcThread(monitor, started 140701249566464)>']
[2025-07-26 08:16:49] 2025-07-26 12:16:38,016 | INFO     | all workflow threads have been joined
[2025-07-26 08:16:49] 2025-07-26 12:16:38,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 08:16:49] 2025-07-26 12:16:38,016 | INFO     | traces error code: 0
[2025-07-26 08:16:49] 2025-07-26 12:16:38,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 08:16:49] 2025-07-26 12:16:47,787 | INFO     | 4714s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 08:16:49] 2025-07-26 12:16:49,332 | INFO     | PID=3308542 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 08:16:49] 2025-07-26 12:16:49,332 | INFO     | .. there are 35 such processes running
[2025-07-26 08:16:49] 2025-07-26 12:16:49,332 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 08:16:49] 2025-07-26 12:16:49,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 08:16:49] 2025-07-26 12:16:49,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 08:16:49] 2025-07-26 12:16:49,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 08:16:49] 2025-07-26 12:16:49,333 | INFO     | [monitor] control thread has ended
[2025-07-26 08:16:49] 2025-07-26 12:16:49,452 [wrapper] ==== pilot stdout END ====
[2025-07-26 08:16:49] 2025-07-26 12:16:49,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 08:16:49] 2025-07-26 12:16:49,459 [wrapper] pilotpid: 3308542
[2025-07-26 08:16:49] 2025-07-26 12:16:49,462 [wrapper] Pilot exit status: 0
[2025-07-26 08:16:49] 2025-07-26 12:16:49,475 [wrapper] pandaids: 6745093179
[2025-07-26 08:16:49] 2025-07-26 12:16:49,590 [wrapper] cleanup supervisor_pilot 3604922 3308543
[2025-07-26 08:16:49] 2025-07-26 12:16:49,594 [wrapper] Test setup, not cleaning
[2025-07-26 08:16:49] 2025-07-26 12:16:49,598 [wrapper] apfmon messages muted
[2025-07-26 08:16:49] 2025-07-26 12:16:49,605 [wrapper] ==== wrapper stdout END ====
[2025-07-26 08:16:49] 2025-07-26 12:16:49,610 [wrapper] ==== wrapper stderr END ====
[2025-07-26 08:16:49]  *** Error codes and diagnostics ***
[2025-07-26 08:16:49]     "exeErrorCode": 0,
[2025-07-26 08:16:49]     "exeErrorDiag": "",
[2025-07-26 08:16:49]     "pilotErrorCode": 0,
[2025-07-26 08:16:49]     "pilotErrorDiag": "",
[2025-07-26 08:16:49]  *** Listing of results directory ***
[2025-07-26 08:16:49] total 424856
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 21:05 pilot3.tar.gz
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 21:49 queuedata.json
[2025-07-26 08:16:49] -rwx------. 1 boincer umatlas     36292 Jul 25 21:49 runpilot2-wrapper.sh
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas       100 Jul 26 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 08:16:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 06:57 run_atlas
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas       105 Jul 26 06:57 job.xml
[2025-07-26 08:16:49] -rw-r--r--. 2 boincer umatlas 227371958 Jul 26 06:57 EVNT.45743347._001699.pool.root.1
[2025-07-26 08:16:49] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 06:57 input.tar.gz
[2025-07-26 08:16:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:57 start_atlas.sh
[2025-07-26 08:16:49] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 06:57 shared
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas         0 Jul 26 06:57 boinc_lockfile
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 06:57 pandaJob.out
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas    980133 Jul 26 06:57 agis_schedconf.cvmfs.json
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas   1593052 Jul 26 06:57 agis_ddmendpoints.agis.ALL.json
[2025-07-26 08:16:49] drwx------. 4 boincer umatlas      4096 Jul 26 06:57 pilot3
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas      6933 Jul 26 08:14 init_data.xml
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas 202269754 Jul 26 08:15 HITS.45743349._030392.pool.root.1
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas       530 Jul 26 08:15 boinc_task_state.xml
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas      1029 Jul 26 08:16 memory_monitor_summary.json
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas    304673 Jul 26 08:16 log.45743349._030392.job.log.tgz.1
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas        95 Jul 26 08:16 pilot_heartbeat.json
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas      7772 Jul 26 08:16 heartbeat.json
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 08:16 boinc_mmap_file
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas        27 Jul 26 08:16 wrapper_checkpoint.txt
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas       938 Jul 26 08:16 pilotlog.txt
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas    460381 Jul 26 08:16 log.45743349._030392.job.log.1
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas       357 Jul 26 08:16 output.list
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas       620 Jul 26 08:16 runtime_log
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas    788480 Jul 26 08:16 result.tar.gz
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas       651 Jul 26 08:16 wUCLDm1Djz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVzQLDmbYFaUo.diag
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas      8655 Jul 26 08:16 runtime_log.err
[2025-07-26 08:16:49] -rw-r--r--. 1 boincer umatlas     22054 Jul 26 08:16 stderr.txt
[2025-07-26 08:16:49] HITS file was successfully produced:
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas 202269754 Jul 26 08:15 shared/HITS.pool.root.1
[2025-07-26 08:16:49]  *** Contents of shared directory: ***
[2025-07-26 08:16:49] total 420900
[2025-07-26 08:16:49] -rw-r--r--. 2 boincer umatlas 227371958 Jul 26 06:57 ATLAS.root_0
[2025-07-26 08:16:49] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 06:57 input.tar.gz
[2025-07-26 08:16:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:57 start_atlas.sh
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas 202269754 Jul 26 08:15 HITS.pool.root.1
[2025-07-26 08:16:49] -rw-------. 1 boincer umatlas    788480 Jul 26 08:16 result.tar.gz
08:16:50 (3304957): run_atlas exited; CPU time 34421.487319
08:16:50 (3304957): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN