Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:38:39 (4079408): wrapper (7.7.26015): starting
06:38:39 (4079408): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 06:38:39] Arguments: --nthreads 8
[2025-07-26 06:38:39] Threads: 8
[2025-07-26 06:38:39] Checking for CVMFS
[2025-07-26 06:38:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:38:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:38:39] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:38:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:38:40] 2.13.1.0 82162 6631 206904 148774 3 440 36368880 40960001 19010 16776704 0 19318917 99.869 13593748 17537 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 06:38:40] CVMFS is ok
[2025-07-26 06:38:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:38:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:38:41] Further information can be found at the LHC@home message board.
[2025-07-26 06:38:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:38:41] Checking for apptainer binary...
[2025-07-26 06:38:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:38:41] Running /usr/bin/apptainer --version
[2025-07-26 06:38:41] apptainer version 1.4.1-1.el9
[2025-07-26 06:38:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:38:41] c-211-33-1.aglt2.org
[2025-07-26 06:38:41] apptainer works
[2025-07-26 06:38:41] Set ATHENA_PROC_NUMBER=8
[2025-07-26 06:38:41] Set ATHENA_CORE_NUMBER=8
[2025-07-26 06:38:41] Starting ATLAS job with PandaID=6745096409
[2025-07-26 06:38:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:31:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:31:26] 2025-07-26 16:30:50,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:31:26] 2025-07-26 16:30:52,325 | INFO     | 21104s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 12:31:26] 2025-07-26 16:30:52,521 | INFO     | monitor loop #1200: job 0:6745096409 is in state 'finished'
[2025-07-26 12:31:26] 2025-07-26 16:30:52,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:31:26] 2025-07-26 16:30:53,954 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 12:31:26] 2025-07-26 16:30:53,971 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2508.8547708333335
[2025-07-26 12:31:26] 2025-07-26 16:30:53,994 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745096409/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 12:31:26] 2025-07-26 16:30:53,995 | INFO     | extracted standard info from prmon json
[2025-07-26 12:31:26] 2025-07-26 16:30:53,995 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 12:31:26] 2025-07-26 16:30:53,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 12:31:26] 2025-07-26 16:30:53,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 12:31:26] 2025-07-26 16:30:53,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 12:31:26] 2025-07-26 16:30:54,001 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:31:26] 2025-07-26 16:30:54,002 | INFO     | sum of square deviations: 12733661532.21452
[2025-07-26 12:31:26] 2025-07-26 16:30:54,005 | INFO     | sum of deviations: 94083345558.0
[2025-07-26 12:31:26] 2025-07-26 16:30:54,006 | INFO     | mean x: 1753536911.510145
[2025-07-26 12:31:26] 2025-07-26 16:30:54,006 | INFO     | mean y: 2491908.0
[2025-07-26 12:31:26] 2025-07-26 16:30:54,006 | INFO     | -- intersect: -12953610213.682943
[2025-07-26 12:31:26] 2025-07-26 16:30:54,006 | INFO     | intersect: -12953610213.682943
[2025-07-26 12:31:26] 2025-07-26 16:30:54,007 | INFO     | chi2: 3.0028632270422357
[2025-07-26 12:31:26] 2025-07-26 16:30:54,007 | INFO     | sum of square deviations: 12188023240.973557
[2025-07-26 12:31:26] 2025-07-26 16:30:54,010 | INFO     | sum of deviations: 114007622732.25307
[2025-07-26 12:31:26] 2025-07-26 16:30:54,010 | INFO     | mean x: 1753536759.0088236
[2025-07-26 12:31:26] 2025-07-26 16:30:54,011 | INFO     | mean y: 2497405.5823529414
[2025-07-26 12:31:26] 2025-07-26 16:30:54,011 | INFO     | -- intersect: -16400208210.873852
[2025-07-26 12:31:26] 2025-07-26 16:30:54,011 | INFO     | intersect: -16400208210.873852
[2025-07-26 12:31:26] 2025-07-26 16:30:54,011 | INFO     | chi2: 2.3216754052792363
[2025-07-26 12:31:26] 2025-07-26 16:30:54,011 | INFO     | current chi2=2.3216754052792363 (change=22.684610328854596 %)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,012 | INFO     | right removable region: 339
[2025-07-26 12:31:26] 2025-07-26 16:30:54,012 | INFO     | sum of square deviations: 12187979015.89417
[2025-07-26 12:31:26] 2025-07-26 16:30:54,015 | INFO     | sum of deviations: 14395570438.92939
[2025-07-26 12:31:26] 2025-07-26 16:30:54,015 | INFO     | mean x: 1753537064.017647
[2025-07-26 12:31:26] 2025-07-26 16:30:54,015 | INFO     | mean y: 2514106.511764706
[2025-07-26 12:31:26] 2025-07-26 16:30:54,015 | INFO     | -- intersect: -2068638648.9549305
[2025-07-26 12:31:26] 2025-07-26 16:30:54,015 | INFO     | intersect: -2068638648.9549305
[2025-07-26 12:31:26] 2025-07-26 16:30:54,016 | INFO     | chi2: 0.8196333307748375
[2025-07-26 12:31:26] 2025-07-26 16:30:54,016 | INFO     | current chi2=0.8196333307748375 (change=72.704939625833 %)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,017 | INFO     | sum of square deviations: 11658110749.534313
[2025-07-26 12:31:26] 2025-07-26 16:30:54,020 | INFO     | sum of deviations: -2240056011.0358086
[2025-07-26 12:31:26] 2025-07-26 16:30:54,020 | INFO     | mean x: 1753537216.5253732
[2025-07-26 12:31:26] 2025-07-26 16:30:54,020 | INFO     | mean y: 2518876.886567164
[2025-07-26 12:31:26] 2025-07-26 16:30:54,021 | INFO     | -- intersect: 339453536.9565591
[2025-07-26 12:31:26] 2025-07-26 16:30:54,021 | INFO     | intersect: 339453536.9565591
[2025-07-26 12:31:26] 2025-07-26 16:30:54,021 | INFO     | chi2: 0.7262436407667643
[2025-07-26 12:31:26] 2025-07-26 16:30:54,021 | INFO     | current chi2=0.7262436407667643 (change=11.394081536409404 %)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,021 | INFO     | left removable region: 20
[2025-07-26 12:31:26] 2025-07-26 16:30:54,022 | INFO     | sum of square deviations: 10066184715.523401
[2025-07-26 12:31:26] 2025-07-26 16:30:54,025 | INFO     | sum of deviations: 17701544116.730404
[2025-07-26 12:31:26] 2025-07-26 16:30:54,025 | INFO     | mean x: 1753537338.5266457
[2025-07-26 12:31:26] 2025-07-26 16:30:54,025 | INFO     | mean y: 2525065.5611285265
[2025-07-26 12:31:26] 2025-07-26 16:30:54,025 | INFO     | -- intersect: -3081097919.2620206
[2025-07-26 12:31:26] 2025-07-26 16:30:54,025 | INFO     | intersect: -3081097919.2620206
[2025-07-26 12:31:26] 2025-07-26 16:30:54,026 | INFO     | chi2: 0.01439182415047682
[2025-07-26 12:31:26] 2025-07-26 16:30:54,026 | INFO     | -- intersect: -3081097919.2620206
[2025-07-26 12:31:26] 2025-07-26 16:30:54,026 | INFO     | current memory leak: 1.76 B/s (using 319 data points, chi2=0.01)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,027 | INFO     | could have reported an average CPU frequency of 2490 MHz (15 samples)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,027 | INFO     | ..............................
[2025-07-26 12:31:26] 2025-07-26 16:30:54,027 | INFO     | . Timing measurements:
[2025-07-26 12:31:26] 2025-07-26 16:30:54,027 | INFO     | . get job = 0 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,027 | INFO     | . initial setup = 4 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,027 | INFO     | . payload setup = 18 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,028 | INFO     | . stage-in = 0 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,028 | INFO     | . payload execution = 21027 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,028 | INFO     | . stage-out = 3 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,028 | INFO     | . log creation = 0 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,028 | INFO     | ..............................
[2025-07-26 12:31:26] 2025-07-26 16:30:54,204 | INFO     | 
[2025-07-26 12:31:26] 2025-07-26 16:30:54,204 | INFO     | job summary report
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | --------------------------------------------------
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | PanDA job id: 6745096409
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | task id: 45743349
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | errors: (none)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | pilot state: finished 
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | transexitcode: 0
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | exeerrorcode: 0
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | exeerrordiag: 
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | exitcode: 0
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | exitmsg: OK
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | cpuconsumptiontime: 63851 s
[2025-07-26 12:31:26] 2025-07-26 16:30:54,205 | INFO     | nevents: 400
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | neventsw: 0
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | pid: 4092604
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | pgrp: 4092604
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | corecount: 8
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | event service: False
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | sizes: {0: 2397248, 1: 2397503, 2: 2397503, 12: 2397531, 13: 2397821, 23: 2397877, 21047: 2431484, 21051: 2440482, 21055: 2440538, 21067: 2440732}
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | --------------------------------------------------
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | 
[2025-07-26 12:31:26] 2025-07-26 16:30:54,206 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 12:31:26] 2025-07-26 16:30:54,239 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | job 6745096409 has completed (purged errors)
[2025-07-26 12:31:26] 2025-07-26 16:30:54,241 | INFO     | overall cleanup function is called
[2025-07-26 12:31:26] 2025-07-26 16:30:55,252 | INFO     | --- collectZombieJob: --- 10, [4092604]
[2025-07-26 12:31:26] 2025-07-26 16:30:55,252 | INFO     | zombie collector waiting for pid 4092604
[2025-07-26 12:31:26] 2025-07-26 16:30:55,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:31:26] 2025-07-26 16:30:55,253 | INFO     | collected zombie processes
[2025-07-26 12:31:26] 2025-07-26 16:30:55,253 | INFO     | will attempt to kill all subprocesses of pid=4092604
[2025-07-26 12:31:26] 2025-07-26 16:30:55,680 | INFO     | process IDs to be killed: [4092604] (in reverse order)
[2025-07-26 12:31:26] 2025-07-26 16:30:55,812 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:31:26] 2025-07-26 16:30:55,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:31:26] 2025-07-26 16:30:55,829 | INFO     | did not find any defunct processes belonging to 4092604
[2025-07-26 12:31:26] 2025-07-26 16:30:55,846 | INFO     | did not find any defunct processes belonging to 4092604
[2025-07-26 12:31:26] 2025-07-26 16:30:55,847 | INFO     | ready for new job
[2025-07-26 12:31:26] 2025-07-26 16:30:55,847 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:31:26] 2025-07-26 16:30:55,850 | INFO     | ***************************************
[2025-07-26 12:31:26] 2025-07-26 16:30:55,850 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:31:26] 2025-07-26 16:30:55,850 | INFO     | ***************************************
[2025-07-26 12:31:26] 2025-07-26 16:30:55,851 | INFO     | 
[2025-07-26 12:31:26] 2025-07-26 16:30:55,857 | INFO     | architecture information:
[2025-07-26 12:31:26] 2025-07-26 16:30:55,864 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:31:26] 2025-07-26 16:30:55,893 | INFO     | cat /etc/os-release:
[2025-07-26 12:31:26] NAME="CentOS Linux"
[2025-07-26 12:31:26] VERSION="7 (Core)"
[2025-07-26 12:31:26] ID="centos"
[2025-07-26 12:31:26] ID_LIKE="rhel fedora"
[2025-07-26 12:31:26] VERSION_ID="7"
[2025-07-26 12:31:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:31:26] ANSI_COLOR="0;31"
[2025-07-26 12:31:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:31:26] HOME_URL="https://www.centos.org/"
[2025-07-26 12:31:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:31:26] 
[2025-07-26 12:31:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:31:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:31:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:31:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:31:26] 
[2025-07-26 12:31:26] 2025-07-26 16:30:55,894 | INFO     | ***************************************
[2025-07-26 12:31:26] 2025-07-26 16:30:56,398 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 12:31:26] 2025-07-26 16:30:56,506 | INFO     | sufficient remaining disk space (129247477760 B)
[2025-07-26 12:31:26] 2025-07-26 16:30:56,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:31:26] 2025-07-26 16:30:56,507 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:31:26] 2025-07-26 16:30:56,507 | INFO     | update_server=False
[2025-07-26 12:31:26] 2025-07-26 16:30:56,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:31:26] 2025-07-26 16:30:56,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:31:26] 2025-07-26 16:30:56,508 | INFO     | aborting loop
[2025-07-26 12:31:26] 2025-07-26 16:30:56,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:31:26] 2025-07-26 16:30:56,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:31:26] 2025-07-26 16:30:57,264 | INFO     | all data control threads have been joined
[2025-07-26 12:31:26] 2025-07-26 16:30:57,513 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:57,514 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:57,680 | INFO     | all job control threads have been joined
[2025-07-26 12:31:26] 2025-07-26 16:30:57,741 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:57,948 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,012 | INFO     | all payload control threads have been joined
[2025-07-26 12:31:26] 2025-07-26 16:30:58,070 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,269 | INFO     | [data] control thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,630 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,637 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,647 | INFO     | [job] validate thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,690 | INFO     | [job] control thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,850 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:58,853 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:59,018 | INFO     | [payload] control thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:30:59,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:31:26] 2025-07-26 16:31:00,225 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:31:00,690 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:31:26] 2025-07-26 16:31:01,185 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139814272919360)>', '<ExcThread(monitor, started 139813768378112)>']
[2025-07-26 12:31:26] 2025-07-26 16:31:06,218 | INFO     | all workflow threads have been joined
[2025-07-26 12:31:26] 2025-07-26 16:31:06,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:31:26] 2025-07-26 16:31:06,220 | INFO     | traces error code: 0
[2025-07-26 12:31:26] 2025-07-26 16:31:06,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:31:26] 2025-07-26 16:31:25,968 | INFO     | PID=4083252 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:31:26] 2025-07-26 16:31:25,969 | INFO     | .. there are 14 such processes running
[2025-07-26 12:31:26] 2025-07-26 16:31:25,969 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:31:26] 2025-07-26 16:31:25,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:31:26] 2025-07-26 16:31:25,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:31:26] 2025-07-26 16:31:25,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:31:26] 2025-07-26 16:31:25,969 | INFO     | [monitor] control thread has ended
[2025-07-26 12:31:26] 2025-07-26 16:31:26,369 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:31:26] 2025-07-26 16:31:26,377 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:31:26] 2025-07-26 16:31:26,382 [wrapper] pilotpid: 4083252
[2025-07-26 12:31:26] 2025-07-26 16:31:26,387 [wrapper] Pilot exit status: 0
[2025-07-26 12:31:26] 2025-07-26 16:31:26,422 [wrapper] pandaids: 6745096409
[2025-07-26 12:31:26] 2025-07-26 16:31:26,510 [wrapper] cleanup supervisor_pilot  329688 4083253
[2025-07-26 12:31:26] 2025-07-26 16:31:26,515 [wrapper] Test setup, not cleaning
[2025-07-26 12:31:26] 2025-07-26 16:31:26,521 [wrapper] apfmon messages muted
[2025-07-26 12:31:26] 2025-07-26 16:31:26,526 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:31:26] 2025-07-26 16:31:26,531 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:31:26]  *** Error codes and diagnostics ***
[2025-07-26 12:31:26]     "exeErrorCode": 0,
[2025-07-26 12:31:26]     "exeErrorDiag": "",
[2025-07-26 12:31:26]     "pilotErrorCode": 0,
[2025-07-26 12:31:26]     "pilotErrorDiag": "",
[2025-07-26 12:31:26]  *** Listing of results directory ***
[2025-07-26 12:31:26] total 357264
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 00:48 pilot3.tar.gz
[2025-07-26 12:31:26] -rwx------. 1 boincer umatlas     36292 Jul 26 00:55 runpilot2-wrapper.sh
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 00:55 queuedata.json
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas       100 Jul 26 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:31:26] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 06:38 run_atlas
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas       105 Jul 26 06:38 job.xml
[2025-07-26 12:31:26] -rw-r--r--. 2 boincer umatlas 144785497 Jul 26 06:38 EVNT.45743347._001825.pool.root.1
[2025-07-26 12:31:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:38 start_atlas.sh
[2025-07-26 12:31:26] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 06:38 shared
[2025-07-26 12:31:26] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 06:38 input.tar.gz
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas         0 Jul 26 06:38 boinc_lockfile
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 06:38 pandaJob.out
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas    980133 Jul 26 06:39 agis_schedconf.cvmfs.json
[2025-07-26 12:31:26] drwx------. 4 boincer umatlas      4096 Jul 26 06:39 pilot3
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas      6858 Jul 26 12:27 init_data.xml
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas 213030241 Jul 26 12:29 HITS.45743349._032436.pool.root.1
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas       531 Jul 26 12:29 boinc_task_state.xml
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas      1052 Jul 26 12:30 memory_monitor_summary.json
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas   1593052 Jul 26 12:30 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas    440939 Jul 26 12:30 log.45743349._032436.job.log.tgz.1
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas        95 Jul 26 12:30 pilot_heartbeat.json
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas      7850 Jul 26 12:30 heartbeat.json
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas        28 Jul 26 12:30 wrapper_checkpoint.txt
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:30 boinc_mmap_file
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas       823 Jul 26 12:31 pilotlog.txt
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas   1632980 Jul 26 12:31 log.45743349._032436.job.log.1
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas       357 Jul 26 12:31 output.list
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:31 runtime_log
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas   2088960 Jul 26 12:31 result.tar.gz
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas      8671 Jul 26 12:31 runtime_log.err
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas       662 Jul 26 12:31 5KuLDmO7lz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmD9zKDmbrMkzn.diag
[2025-07-26 12:31:26] -rw-r--r--. 1 boincer umatlas     21295 Jul 26 12:31 stderr.txt
[2025-07-26 12:31:26] HITS file was successfully produced:
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas 213030241 Jul 26 12:29 shared/HITS.pool.root.1
[2025-07-26 12:31:26]  *** Contents of shared directory: ***
[2025-07-26 12:31:26] total 352032
[2025-07-26 12:31:26] -rw-r--r--. 2 boincer umatlas 144785497 Jul 26 06:38 ATLAS.root_0
[2025-07-26 12:31:26] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:38 start_atlas.sh
[2025-07-26 12:31:26] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 06:38 input.tar.gz
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas 213030241 Jul 26 12:29 HITS.pool.root.1
[2025-07-26 12:31:26] -rw-------. 1 boincer umatlas   2088960 Jul 26 12:31 result.tar.gz
12:31:27 (4079408): run_atlas exited; CPU time 64737.555303
12:31:27 (4079408): called boinc_finish(0)

</stderr_txt>
]]>

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