Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
13:12:35 (3793588): wrapper (7.7.26015): starting
13:12:35 (3793588): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 13:12:35] Arguments: --nthreads 4
[2025-07-26 13:12:35] Threads: 4
[2025-07-26 13:12:35] Checking for CVMFS
[2025-07-26 13:12:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 13:12:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 13:12:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 13:12:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 13:12:36] 2.13.0.0 3104146 698 77472 148775 2 11 2450257 4096000 2766 130560 0 1874186 99.997 23866 887 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-07-26 13:12:36] CVMFS is ok
[2025-07-26 13:12:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 13:12:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-07-26 13:12:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-07-26 13:12:36] Further information can be found at the LHC@home message board.
[2025-07-26 13:12:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 13:12:36] Checking for apptainer binary...
[2025-07-26 13:12:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 13:12:36] Running /usr/bin/apptainer --version
[2025-07-26 13:12:36] apptainer version 1.2.3
[2025-07-26 13:12:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 13:12:36] Ryzen-7-7700-Zen4-Deb12
[2025-07-26 13:12:36] apptainer works
[2025-07-26 13:12:36] Set ATHENA_PROC_NUMBER=4
[2025-07-26 13:12:36] Set ATHENA_CORE_NUMBER=4
[2025-07-26 13:12:36] Starting ATLAS job with PandaID=6745093147
[2025-07-26 13:12:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 14:39:20]  *** The last 200 lines of the pilot log: ***
[2025-07-26 14:39:20]  protocol_id=None
[2025-07-26 14:39:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 14:39:20]  replicas=None
[2025-07-26 14:39:20]  scope=mc23_13p6TeV
[2025-07-26 14:39:20]  status=None
[2025-07-26 14:39:20]  status_code=0
[2025-07-26 14:39:20]  storage_token=
[2025-07-26 14:39:20]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6745093147/log.45743349._030360.job.log.tgz.1
[2025-07-26 14:39:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/82/log.45743349._030360.job.log.tgz.1
[2025-07-26 14:39:20]  workdir=None
[2025-07-26 14:39:20] ]
[2025-07-26 14:39:20] 2025-07-26 12:38:41,021 | INFO     | transferring file log.45743349._030360.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6745093147/log.45743349._030360.job.log.tgz.1 to /var/lib/boinc
[2025-07-26 14:39:20] 2025-07-26 12:38:41,021 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6745093147/log.45743349._030360.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.457433
[2025-07-26 14:39:20] 2025-07-26 12:38:41,057 | INFO     | adding to output.list: log.45743349._030360.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/82/log.45743349._030360.job.log.tg
[2025-07-26 14:39:20] 2025-07-26 12:38:41,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 14:39:20] 2025-07-26 12:38:41,058 | INFO     | summary of transferred files:
[2025-07-26 14:39:20] 2025-07-26 12:38:41,058 | INFO     |  -- lfn=log.45743349._030360.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 14:39:20] 2025-07-26 12:38:41,058 | INFO     | stage-out finished correctly
[2025-07-26 14:39:20] 2025-07-26 12:38:41,842 | WARNING  | process 3804102 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 14:39:20] 2025-07-26 12:38:41,842 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6745093147/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 14:39:20] 2025-07-26 12:38:41,880 | INFO     | number of running child processes to parent process 3804102: 1
[2025-07-26 14:39:20] 2025-07-26 12:38:41,880 | INFO     | maximum number of monitored processes: 6
[2025-07-26 14:39:20] 2025-07-26 12:38:43,971 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | job 6745093147 has state=finished
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | preparing for final server update for job 6745093147 in state='finished'
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | this job has now completed (state=finished)
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | log transfer has been attempted: DONE
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | job 6745093147 has finished - writing final server update
[2025-07-26 14:39:20] 2025-07-26 12:38:44,014 | INFO     | total number of processed events: 400 (read)
[2025-07-26 14:39:20] 2025-07-26 12:38:44,015 | INFO     | executing command: lscpu
[2025-07-26 14:39:20] 2025-07-26 12:38:44,030 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 14:39:20] 2025-07-26 12:38:44,383 | INFO     | monitor loop #389: job 0:6745093147 is in state 'finished'
[2025-07-26 14:39:20] 2025-07-26 12:38:44,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 14:39:20] 2025-07-26 12:38:46,886 | INFO     | monitor loop #390: job 0:6745093147 is in state 'finished'
[2025-07-26 14:39:20] 2025-07-26 12:38:46,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,301 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 14:39:20] 2025-07-26 12:38:48,302 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4843.380062499999
[2025-07-26 14:39:20] 2025-07-26 12:38:48,304 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6745093147/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,304 | INFO     | extracted standard info from prmon json
[2025-07-26 14:39:20] 2025-07-26 12:38:48,304 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 14:39:20] 2025-07-26 12:38:48,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 14:39:20] 2025-07-26 12:38:48,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 14:39:20] 2025-07-26 12:38:48,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 14:39:20] 2025-07-26 12:38:48,305 | INFO     | fitting pss+swap vs Time
[2025-07-26 14:39:20] 2025-07-26 12:38:48,305 | INFO     | sum of square deviations: 147126479.5
[2025-07-26 14:39:20] 2025-07-26 12:38:48,305 | INFO     | sum of deviations: -168125912.49999988
[2025-07-26 14:39:20] 2025-07-26 12:38:48,305 | INFO     | mean x: 1753531035.5
[2025-07-26 14:39:20] 2025-07-26 12:38:48,305 | INFO     | mean y: 2355853.4743589745
[2025-07-26 14:39:20] 2025-07-26 12:38:48,305 | INFO     | -- intersect: 2006169214.8924658
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | intersect: 2006169214.8924658
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | chi2: 0.029155556173104568
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | -- intersect: 2006169214.8924658
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | current memory leak: -1.14 B/s (using 78 data points, chi2=0.03)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | could have reported an average CPU frequency of 4781 MHz (6 samples)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | ..............................
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . Timing measurements:
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . get job = 0 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . initial setup = 1 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . payload setup = 2 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . stage-in = 0 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . payload execution = 5137 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . stage-out = 0 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | . log creation = 0 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,306 | INFO     | ..............................
[2025-07-26 14:39:20] 2025-07-26 12:38:48,378 | INFO     | 
[2025-07-26 14:39:20] 2025-07-26 12:38:48,378 | INFO     | job summary report
[2025-07-26 14:39:20] 2025-07-26 12:38:48,378 | INFO     | --------------------------------------------------
[2025-07-26 14:39:20] 2025-07-26 12:38:48,378 | INFO     | PanDA job id: 6745093147
[2025-07-26 14:39:20] 2025-07-26 12:38:48,378 | INFO     | task id: 45743349
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | errors: (none)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | pilot state: finished 
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | transexitcode: 0
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | exeerrorcode: 0
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | exeerrordiag: 
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | exitcode: 0
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | exitmsg: OK
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | cpuconsumptiontime: 19798 s
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | nevents: 400
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | neventsw: 0
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | pid: 3804102
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | pgrp: 3804102
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | corecount: 4
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | event service: False
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | sizes: {0: 2397482, 2: 2397744, 11: 2397772, 5143: 2424243, 5144: 2433310, 5147: 2433310, 5151: 2433632}
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | --------------------------------------------------
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | 
[2025-07-26 14:39:20] 2025-07-26 12:38:48,379 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-07-26 14:39:20] 2025-07-26 12:38:48,390 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | job 6745093147 has completed (purged errors)
[2025-07-26 14:39:20] 2025-07-26 12:38:48,391 | INFO     | overall cleanup function is called
[2025-07-26 14:39:20] 2025-07-26 12:38:49,395 | INFO     | --- collectZombieJob: --- 10, [3804102]
[2025-07-26 14:39:20] 2025-07-26 12:38:49,395 | INFO     | zombie collector waiting for pid 3804102
[2025-07-26 14:39:20] 2025-07-26 12:38:49,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 14:39:20] 2025-07-26 12:38:49,395 | INFO     | collected zombie processes
[2025-07-26 14:39:20] 2025-07-26 12:38:49,396 | INFO     | will attempt to kill all subprocesses of pid=3804102
[2025-07-26 14:39:20] 2025-07-26 12:38:49,436 | INFO     | process IDs to be killed: [3804102] (in reverse order)
[2025-07-26 14:39:20] 2025-07-26 12:38:49,462 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 14:39:20] 2025-07-26 12:38:49,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 14:39:20] 2025-07-26 12:38:49,464 | INFO     | did not find any defunct processes belonging to 3804102
[2025-07-26 14:39:20] 2025-07-26 12:38:49,465 | INFO     | did not find any defunct processes belonging to 3804102
[2025-07-26 14:39:20] 2025-07-26 12:38:49,465 | INFO     | ready for new job
[2025-07-26 14:39:20] 2025-07-26 12:38:49,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 14:39:20] 2025-07-26 12:38:49,466 | INFO     | ***************************************
[2025-07-26 14:39:20] 2025-07-26 12:38:49,466 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 14:39:20] 2025-07-26 12:38:49,466 | INFO     | ***************************************
[2025-07-26 14:39:20] 2025-07-26 12:38:49,466 | INFO     | 
[2025-07-26 14:39:20] 2025-07-26 12:38:49,467 | INFO     | architecture information:
[2025-07-26 14:39:20] 2025-07-26 12:38:49,467 | INFO     | executing command: cat /etc/os-release
[2025-07-26 14:39:20] 2025-07-26 12:38:49,475 | INFO     | cat /etc/os-release:
[2025-07-26 14:39:20] NAME="CentOS Linux"
[2025-07-26 14:39:20] VERSION="7 (Core)"
[2025-07-26 14:39:20] ID="centos"
[2025-07-26 14:39:20] ID_LIKE="rhel fedora"
[2025-07-26 14:39:20] VERSION_ID="7"
[2025-07-26 14:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 14:39:20] ANSI_COLOR="0;31"
[2025-07-26 14:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 14:39:20] HOME_URL="https://www.centos.org/"
[2025-07-26 14:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 14:39:20] 
[2025-07-26 14:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 14:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 14:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 14:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 14:39:20] 
[2025-07-26 14:39:20] 2025-07-26 12:38:49,476 | INFO     | ***************************************
[2025-07-26 14:39:20] 2025-07-26 12:38:49,978 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | INFO     | sufficient remaining disk space (886377021440 B)
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | INFO     | update_server=False
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 14:39:20] 2025-07-26 12:38:49,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:39:20] 2025-07-26 12:38:50,018 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 14:39:20] 2025-07-26 12:38:50,275 | INFO     | all data control threads have been joined
[2025-07-26 14:39:20] 2025-07-26 12:38:50,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:39:20] 2025-07-26 12:38:50,391 | INFO     | aborting loop
[2025-07-26 14:39:20] 2025-07-26 12:38:50,858 | INFO     | all job control threads have been joined
[2025-07-26 14:39:20] 2025-07-26 12:38:50,991 | INFO     | [job] queue monitor thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:50,993 | INFO     | [job] retrieve thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,024 | INFO     | all payload control threads have been joined
[2025-07-26 14:39:20] 2025-07-26 12:38:51,123 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,131 | INFO     | [payload] failed_post thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,281 | INFO     | [data] control thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,295 | INFO     | [payload] validate_post thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,395 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,395 | INFO     | [job] job monitor thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,427 | INFO     | [data] copytool_in thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,711 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,863 | INFO     | [job] control thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:51,991 | INFO     | [data] copytool_out thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:52,027 | INFO     | [payload] control thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:52,389 | INFO     | [job] validate thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:38:54,023 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:39:00,711 | INFO     | job.realtimelogging is not enabled
[2025-07-26 14:39:20] 2025-07-26 12:39:01,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 14:39:20] 2025-07-26 12:39:02,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943092569920)>', '<ExcThread(monitor, started 139942734829312)>']
[2025-07-26 14:39:20] 2025-07-26 12:39:07,951 | INFO     | all workflow threads have been joined
[2025-07-26 14:39:20] 2025-07-26 12:39:07,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 14:39:20] 2025-07-26 12:39:07,952 | INFO     | traces error code: 0
[2025-07-26 14:39:20] 2025-07-26 12:39:07,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | INFO     | PID=3797596 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | INFO     | .. there are 4 such processes running
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 14:39:20] 2025-07-26 12:39:20,112 | INFO     | [monitor] control thread has ended
[2025-07-26 14:39:20] 2025-07-26 12:39:20,185 [wrapper] ==== pilot stdout END ====
[2025-07-26 14:39:20] 2025-07-26 12:39:20,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 14:39:20] 2025-07-26 12:39:20,187 [wrapper] pilotpid: 3797596
[2025-07-26 14:39:20] 2025-07-26 12:39:20,188 [wrapper] Pilot exit status: 0
[2025-07-26 14:39:20] 2025-07-26 12:39:20,192 [wrapper] pandaids: 6745093147
[2025-07-26 14:39:20] 2025-07-26 12:39:20,206 [wrapper] cleanup supervisor_pilot 3886030 3797597
[2025-07-26 14:39:20] 2025-07-26 12:39:20,207 [wrapper] Test setup, not cleaning
[2025-07-26 14:39:20] 2025-07-26 12:39:20,208 [wrapper] apfmon messages muted
[2025-07-26 14:39:20] 2025-07-26 12:39:20,209 [wrapper] ==== wrapper stdout END ====
[2025-07-26 14:39:20] 2025-07-26 12:39:20,211 [wrapper] ==== wrapper stderr END ====
[2025-07-26 14:39:20]  *** Error codes and diagnostics ***
[2025-07-26 14:39:20]     "exeErrorCode": 0,
[2025-07-26 14:39:20]     "exeErrorDiag": "",
[2025-07-26 14:39:20]     "pilotErrorCode": 0,
[2025-07-26 14:39:20]     "pilotErrorDiag": "",
[2025-07-26 14:39:20]  *** Listing of results directory ***
[2025-07-26 14:39:20] total 436804
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc    530466 Jul 26 03:05 pilot3.tar.gz
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc      5112 Jul 26 03:47 queuedata.json
[2025-07-26 14:39:20] -rwx------ 1 boinc boinc     36292 Jul 26 03:48 runpilot2-wrapper.sh
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc       100 Jul 26 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 14:39:20] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 13:12 run_atlas
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc       105 Jul 26 13:12 job.xml
[2025-07-26 14:39:20] -rw-r--r-- 2 boinc boinc     15095 Jul 26 13:12 start_atlas.sh
[2025-07-26 14:39:20] drwxrwx--x 2 boinc boinc      4096 Jul 26 13:12 shared
[2025-07-26 14:39:20] -rw-r--r-- 2 boinc boinc    542899 Jul 26 13:12 input.tar.gz
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc      9223 Jul 26 13:12 init_data.xml
[2025-07-26 14:39:20] -rw-r--r-- 2 boinc boinc 229174248 Jul 26 13:12 EVNT.45743347._001698.pool.root.1
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc         0 Jul 26 13:12 boinc_lockfile
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc      2563 Jul 26 13:12 pandaJob.out
[2025-07-26 14:39:20] -rw------- 1 boinc boinc    980133 Jul 26 13:12 agis_schedconf.cvmfs.json
[2025-07-26 14:39:20] -rw------- 1 boinc boinc   1593052 Jul 26 13:12 agis_ddmendpoints.agis.ALL.json
[2025-07-26 14:39:20] drwx------ 4 boinc boinc      4096 Jul 26 13:12 pilot3
[2025-07-26 14:39:20] -rw------- 1 boinc boinc 212728495 Jul 26 14:38 HITS.45743349._030360.pool.root.1
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc       530 Jul 26 14:38 boinc_task_state.xml
[2025-07-26 14:39:20] -rw------- 1 boinc boinc        95 Jul 26 14:38 pilot_heartbeat.json
[2025-07-26 14:39:20] -rw------- 1 boinc boinc      1013 Jul 26 14:38 memory_monitor_summary.json
[2025-07-26 14:39:20] -rw------- 1 boinc boinc    235693 Jul 26 14:38 log.45743349._030360.job.log.tgz.1
[2025-07-26 14:39:20] -rw------- 1 boinc boinc      7747 Jul 26 14:38 heartbeat.json
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc      8192 Jul 26 14:39 boinc_mmap_file
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc        27 Jul 26 14:39 wrapper_checkpoint.txt
[2025-07-26 14:39:20] -rw------- 1 boinc boinc       822 Jul 26 14:39 pilotlog.txt
[2025-07-26 14:39:20] -rw------- 1 boinc boinc    517275 Jul 26 14:39 log.45743349._030360.job.log.1
[2025-07-26 14:39:20] -rw------- 1 boinc boinc       357 Jul 26 14:39 output.list
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc       620 Jul 26 14:39 runtime_log
[2025-07-26 14:39:20] -rw------- 1 boinc boinc    768000 Jul 26 14:39 result.tar.gz
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc      8783 Jul 26 14:39 runtime_log.err
[2025-07-26 14:39:20] -rw------- 1 boinc boinc       655 Jul 26 14:39 FL4NDm2Cjz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTvzKDm5ZOeom.diag
[2025-07-26 14:39:20] -rw-r--r-- 1 boinc boinc     21924 Jul 26 14:39 stderr.txt
[2025-07-26 14:39:20] HITS file was successfully produced:
[2025-07-26 14:39:20] -rw------- 1 boinc boinc 212728495 Jul 26 14:38 shared/HITS.pool.root.1
[2025-07-26 14:39:20]  *** Contents of shared directory: ***
[2025-07-26 14:39:20] total 432856
[2025-07-26 14:39:20] -rw-r--r-- 2 boinc boinc     15095 Jul 26 13:12 start_atlas.sh
[2025-07-26 14:39:20] -rw-r--r-- 2 boinc boinc    542899 Jul 26 13:12 input.tar.gz
[2025-07-26 14:39:20] -rw-r--r-- 2 boinc boinc 229174248 Jul 26 13:12 ATLAS.root_0
[2025-07-26 14:39:20] -rw------- 1 boinc boinc 212728495 Jul 26 14:38 HITS.pool.root.1
[2025-07-26 14:39:20] -rw------- 1 boinc boinc    768000 Jul 26 14:39 result.tar.gz
14:39:21 (3793588): run_atlas exited; CPU time 19822.224561
14:39:21 (3793588): called boinc_finish(0)

</stderr_txt>
]]>

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