Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:04 (336294): wrapper (7.7.26015): starting
10:06:04 (336294): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 10:06:04] Arguments: --nthreads 12
[2025-07-26 10:06:04] Threads: 12
[2025-07-26 10:06:04] Checking for CVMFS
[2025-07-26 10:06:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:06:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:06:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:06:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:06:04] 2.12.6.0 240040 17022 314592 148778 1 213 25452038 32935936 14192 16776704 1 56596346 99.768 54270917 10506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 10:06:04] CVMFS is ok
[2025-07-26 10:06:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 10:06:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 10:06:04] Further information can be found at the LHC@home message board.
[2025-07-26 10:06:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:06:04] Checking for apptainer binary...
[2025-07-26 10:06:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:06:04] Running /usr/bin/apptainer --version
[2025-07-26 10:06:04] apptainer version 1.4.1-1.el9
[2025-07-26 10:06:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:06:05] c6-1-24-2.aglt2.org
[2025-07-26 10:06:05] apptainer works
[2025-07-26 10:06:05] Set ATHENA_PROC_NUMBER=12
[2025-07-26 10:06:05] Set ATHENA_CORE_NUMBER=12
[2025-07-26 10:06:05] Starting ATLAS job with PandaID=6745095937
[2025-07-26 10:06:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:36:39]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:36:39] 2025-07-26 16:36:05,879 | INFO     | fitting pss+swap vs Time
[2025-07-26 12:36:39] 2025-07-26 16:36:05,879 | INFO     | sum of square deviations: 985052314.6666657
[2025-07-26 12:36:39] 2025-07-26 16:36:05,880 | INFO     | sum of deviations: 30336716745.95238
[2025-07-26 12:36:39] 2025-07-26 16:36:05,880 | INFO     | mean x: 1753543287.5238094
[2025-07-26 12:36:39] 2025-07-26 16:36:05,881 | INFO     | mean y: 2295156.156462585
[2025-07-26 12:36:39] 2025-07-26 16:36:05,881 | INFO     | -- intersect: -54001685366.82452
[2025-07-26 12:36:39] 2025-07-26 16:36:05,881 | INFO     | intersect: -54001685366.82452
[2025-07-26 12:36:39] 2025-07-26 16:36:05,881 | INFO     | chi2: 2.4807035245934737
[2025-07-26 12:36:39] 2025-07-26 16:36:05,881 | INFO     | sum of square deviations: 887930827.8873258
[2025-07-26 12:36:39] 2025-07-26 16:36:05,882 | INFO     | sum of deviations: 38455575103.43661
[2025-07-26 12:36:39] 2025-07-26 16:36:05,882 | INFO     | mean x: 1753543135.028169
[2025-07-26 12:36:39] 2025-07-26 16:36:05,882 | INFO     | mean y: 2307523.6408450706
[2025-07-26 12:36:39] 2025-07-26 16:36:05,882 | INFO     | -- intersect: -75942245372.03633
[2025-07-26 12:36:39] 2025-07-26 16:36:05,882 | INFO     | intersect: -75942245372.03633
[2025-07-26 12:36:39] 2025-07-26 16:36:05,883 | INFO     | chi2: 1.7847878009190024
[2025-07-26 12:36:39] 2025-07-26 16:36:05,883 | INFO     | current chi2=1.7847878009190024 (change=28.053159790165367 %)
[2025-07-26 12:36:39] 2025-07-26 16:36:05,883 | INFO     | sum of square deviations: 797387764.2335762
[2025-07-26 12:36:39] 2025-07-26 16:36:05,883 | INFO     | sum of deviations: 36553310523.262794
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | mean x: 1753542982.510949
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | mean y: 2304321.8248175182
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | -- intersect: -80382426960.35114
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | intersect: -80382426960.35114
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | chi2: 1.783929979099556
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | current chi2=1.783929979099556 (change=0.0480629584651285 %)
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | right removable region: 136
[2025-07-26 12:36:39] 2025-07-26 16:36:05,884 | INFO     | sum of square deviations: 887901425.7464782
[2025-07-26 12:36:39] 2025-07-26 16:36:05,885 | INFO     | sum of deviations: 4261540841.056344
[2025-07-26 12:36:39] 2025-07-26 16:36:05,885 | INFO     | mean x: 1753543440.0422535
[2025-07-26 12:36:39] 2025-07-26 16:36:05,885 | INFO     | mean y: 2335690.323943662
[2025-07-26 12:36:39] 2025-07-26 16:36:05,885 | INFO     | -- intersect: -8413910493.788166
[2025-07-26 12:36:39] 2025-07-26 16:36:05,885 | INFO     | intersect: -8413910493.788166
[2025-07-26 12:36:39] 2025-07-26 16:36:05,886 | INFO     | chi2: 0.8053359824513859
[2025-07-26 12:36:39] 2025-07-26 16:36:05,886 | INFO     | current chi2=0.8053359824513859 (change=67.5359842694882 %)
[2025-07-26 12:36:39] 2025-07-26 16:36:05,886 | INFO     | sum of square deviations: 797363973.8394173
[2025-07-26 12:36:39] 2025-07-26 16:36:05,886 | INFO     | sum of deviations: 1316910099.7956247
[2025-07-26 12:36:39] 2025-07-26 16:36:05,886 | INFO     | mean x: 1753543592.5547445
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | mean y: 2340550.1605839417
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | -- intersect: -2893776334.0119543
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | intersect: -2893776334.0119543
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | chi2: 0.7501396900437971
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | current chi2=0.7501396900437971 (change=6.853821710483519 %)
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | left removable region: 20
[2025-07-26 12:36:39] 2025-07-26 16:36:05,887 | INFO     | sum of square deviations: 484003613.44827604
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | sum of deviations: 4706097572.034484
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | mean x: 1753543562.0689654
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | mean y: 2363091.370689655
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | -- intersect: -17047813540.81547
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | intersect: -17047813540.81547
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | chi2: 0.024534743674781017
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | -- intersect: -17047813540.81547
[2025-07-26 12:36:39] 2025-07-26 16:36:05,888 | INFO     | current memory leak: 9.72 B/s (using 116 data points, chi2=0.02)
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | could have reported an average CPU frequency of 2617 MHz (8 samples)
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | ..............................
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | . Timing measurements:
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | . get job = 0 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | . initial setup = 5 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | . payload setup = 15 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | . stage-in = 0 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,889 | INFO     | . payload execution = 8932 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,890 | INFO     | . stage-out = 0 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,890 | INFO     | . log creation = 0 s
[2025-07-26 12:36:39] 2025-07-26 16:36:05,890 | INFO     | ..............................
[2025-07-26 12:36:39] 2025-07-26 16:36:06,415 | INFO     | 
[2025-07-26 12:36:39] 2025-07-26 16:36:06,419 | INFO     | job summary report
[2025-07-26 12:36:39] 2025-07-26 16:36:06,420 | INFO     | --------------------------------------------------
[2025-07-26 12:36:39] 2025-07-26 16:36:06,420 | INFO     | PanDA job id: 6745095937
[2025-07-26 12:36:39] 2025-07-26 16:36:06,420 | INFO     | task id: 45743349
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | errors: (none)
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | pilot state: finished 
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | transexitcode: 0
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | exeerrorcode: 0
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | exeerrordiag: 
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | exitcode: 0
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | exitmsg: OK
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | cpuconsumptiontime: 49261 s
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | nevents: 400
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | neventsw: 0
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | pid: 348618
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | pgrp: 348618
[2025-07-26 12:36:39] 2025-07-26 16:36:06,421 | INFO     | corecount: 12
[2025-07-26 12:36:39] 2025-07-26 16:36:06,422 | INFO     | event service: False
[2025-07-26 12:36:39] 2025-07-26 16:36:06,422 | INFO     | sizes: {0: 2396647, 1: 2397503, 2: 2397503, 8: 2397793, 13: 2397821, 8948: 2426298, 8950: 2435296, 8953: 2435380, 8960: 2435574}
[2025-07-26 12:36:39] 2025-07-26 16:36:06,422 | INFO     | --------------------------------------------------
[2025-07-26 12:36:39] 2025-07-26 16:36:06,422 | INFO     | 
[2025-07-26 12:36:39] 2025-07-26 16:36:06,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 12:36:39] 2025-07-26 16:36:06,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:36:39] 2025-07-26 16:36:06,450 | INFO     | job 6745095937 has completed (purged errors)
[2025-07-26 12:36:39] 2025-07-26 16:36:06,450 | INFO     | overall cleanup function is called
[2025-07-26 12:36:39] 2025-07-26 16:36:06,783 | INFO     | PID=340749 has CPU usage=15.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:36:39] 2025-07-26 16:36:06,784 | INFO     | .. there are 21 such processes running
[2025-07-26 12:36:39] 2025-07-26 16:36:07,458 | INFO     | --- collectZombieJob: --- 10, [348618]
[2025-07-26 12:36:39] 2025-07-26 16:36:07,459 | INFO     | zombie collector waiting for pid 348618
[2025-07-26 12:36:39] 2025-07-26 16:36:07,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:36:39] 2025-07-26 16:36:07,459 | INFO     | collected zombie processes
[2025-07-26 12:36:39] 2025-07-26 16:36:07,459 | INFO     | will attempt to kill all subprocesses of pid=348618
[2025-07-26 12:36:39] 2025-07-26 16:36:07,752 | INFO     | process IDs to be killed: [348618] (in reverse order)
[2025-07-26 12:36:39] 2025-07-26 16:36:07,884 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:36:39] 2025-07-26 16:36:07,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:36:39] 2025-07-26 16:36:07,899 | INFO     | did not find any defunct processes belonging to 348618
[2025-07-26 12:36:39] 2025-07-26 16:36:07,915 | INFO     | did not find any defunct processes belonging to 348618
[2025-07-26 12:36:39] 2025-07-26 16:36:07,916 | INFO     | ready for new job
[2025-07-26 12:36:39] 2025-07-26 16:36:07,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:36:39] 2025-07-26 16:36:07,918 | INFO     | ***************************************
[2025-07-26 12:36:39] 2025-07-26 16:36:07,918 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:36:39] 2025-07-26 16:36:07,918 | INFO     | ***************************************
[2025-07-26 12:36:39] 2025-07-26 16:36:07,918 | INFO     | 
[2025-07-26 12:36:39] 2025-07-26 16:36:07,936 | INFO     | architecture information:
[2025-07-26 12:36:39] 2025-07-26 16:36:07,937 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:36:39] 2025-07-26 16:36:07,960 | INFO     | cat /etc/os-release:
[2025-07-26 12:36:39] NAME="CentOS Linux"
[2025-07-26 12:36:39] VERSION="7 (Core)"
[2025-07-26 12:36:39] ID="centos"
[2025-07-26 12:36:39] ID_LIKE="rhel fedora"
[2025-07-26 12:36:39] VERSION_ID="7"
[2025-07-26 12:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:36:39] ANSI_COLOR="0;31"
[2025-07-26 12:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:36:39] HOME_URL="https://www.centos.org/"
[2025-07-26 12:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:36:39] 
[2025-07-26 12:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:36:39] 
[2025-07-26 12:36:39] 2025-07-26 16:36:07,960 | INFO     | ***************************************
[2025-07-26 12:36:39] 2025-07-26 16:36:08,463 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 12:36:39] 2025-07-26 16:36:08,489 | INFO     | sufficient remaining disk space (76521930752 B)
[2025-07-26 12:36:39] 2025-07-26 16:36:08,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:36:39] 2025-07-26 16:36:08,490 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:36:39] 2025-07-26 16:36:08,490 | INFO     | update_server=False
[2025-07-26 12:36:39] 2025-07-26 16:36:08,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:36:39] 2025-07-26 16:36:08,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:36:39] 2025-07-26 16:36:08,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:36:39] 2025-07-26 16:36:08,789 | INFO     | aborting loop
[2025-07-26 12:36:39] 2025-07-26 16:36:09,276 | INFO     | all data control threads have been joined
[2025-07-26 12:36:39] 2025-07-26 16:36:09,341 | INFO     | all payload control threads have been joined
[2025-07-26 12:36:39] 2025-07-26 16:36:09,452 | INFO     | all job control threads have been joined
[2025-07-26 12:36:39] 2025-07-26 16:36:09,496 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:09,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:36:39] 2025-07-26 16:36:09,777 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:09,794 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:09,829 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,051 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,169 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,256 | INFO     | [job] validate thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,282 | INFO     | [data] control thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,283 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,346 | INFO     | [payload] control thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,458 | INFO     | [job] control thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,653 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:10,951 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:11,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:36:39] 2025-07-26 16:36:12,055 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:13,621 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:19,031 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:36:39] 2025-07-26 16:36:20,037 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:36:39] 2025-07-26 16:36:20,773 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-07-26 12:36:39] 2025-07-26 16:36:20,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691308812096)>', '<ExcThread(monitor, started 140690805729024)>']
[2025-07-26 12:36:39] 2025-07-26 16:36:25,832 | INFO     | all workflow threads have been joined
[2025-07-26 12:36:39] 2025-07-26 16:36:25,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:36:39] 2025-07-26 16:36:25,833 | INFO     | traces error code: 0
[2025-07-26 12:36:39] 2025-07-26 16:36:25,833 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:36:39] 2025-07-26 16:36:39,322 | INFO     | PID=340749 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 12:36:39] 2025-07-26 16:36:39,322 | INFO     | .. there are 21 such processes running
[2025-07-26 12:36:39] 2025-07-26 16:36:39,322 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:36:39] 2025-07-26 16:36:39,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:36:39] 2025-07-26 16:36:39,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:36:39] 2025-07-26 16:36:39,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:36:39] 2025-07-26 16:36:39,323 | INFO     | [monitor] control thread has ended
[2025-07-26 12:36:39] 2025-07-26 16:36:39,528 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:36:39] 2025-07-26 16:36:39,535 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:36:39] 2025-07-26 16:36:39,539 [wrapper] pilotpid: 340749
[2025-07-26 12:36:39] 2025-07-26 16:36:39,544 [wrapper] Pilot exit status: 0
[2025-07-26 12:36:39] 2025-07-26 16:36:39,561 [wrapper] pandaids: 6745095937
[2025-07-26 12:36:39] 2025-07-26 16:36:39,671 [wrapper] cleanup supervisor_pilot 1059249 340750
[2025-07-26 12:36:39] 2025-07-26 16:36:39,679 [wrapper] Test setup, not cleaning
[2025-07-26 12:36:39] 2025-07-26 16:36:39,682 [wrapper] apfmon messages muted
[2025-07-26 12:36:39] 2025-07-26 16:36:39,685 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:36:39] 2025-07-26 16:36:39,688 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:36:39]  *** Error codes and diagnostics ***
[2025-07-26 12:36:39]     "exeErrorCode": 0,
[2025-07-26 12:36:39]     "exeErrorDiag": "",
[2025-07-26 12:36:39]     "pilotErrorCode": 0,
[2025-07-26 12:36:39]     "pilotErrorDiag": "",
[2025-07-26 12:36:39]  *** Listing of results directory ***
[2025-07-26 12:36:39] total 353712
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 23:54 pilot3.tar.gz
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 00:22 queuedata.json
[2025-07-26 12:36:39] -rwx------. 1 boincer umatlas     36292 Jul 26 00:23 runpilot2-wrapper.sh
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas       100 Jul 26 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:36:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 10:06 run_atlas
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas       105 Jul 26 10:06 job.xml
[2025-07-26 12:36:39] -rw-r--r--. 2 boincer umatlas 146291343 Jul 26 10:06 EVNT.45743347._001799.pool.root.1
[2025-07-26 12:36:39] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 10:06 input.tar.gz
[2025-07-26 12:36:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:06 start_atlas.sh
[2025-07-26 12:36:39] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 10:06 shared
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas         0 Jul 26 10:06 boinc_lockfile
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 10:06 pandaJob.out
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas    980133 Jul 26 10:06 agis_schedconf.cvmfs.json
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas   1593052 Jul 26 10:06 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:36:39] drwx------. 4 boincer umatlas      4096 Jul 26 10:06 pilot3
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 12:29 init_data.xml
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas 209753289 Jul 26 12:35 HITS.45743349._032040.pool.root.1
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas       529 Jul 26 12:35 boinc_task_state.xml
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas        95 Jul 26 12:35 pilot_heartbeat.json
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas      1039 Jul 26 12:35 memory_monitor_summary.json
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas    398237 Jul 26 12:35 log.45743349._032040.job.log.tgz.1
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas      7821 Jul 26 12:36 heartbeat.json
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 12:36 boinc_mmap_file
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas        27 Jul 26 12:36 wrapper_checkpoint.txt
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas       822 Jul 26 12:36 pilotlog.txt
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas    743042 Jul 26 12:36 log.45743349._032040.job.log.1
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas       357 Jul 26 12:36 output.list
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas       620 Jul 26 12:36 runtime_log
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas   1157120 Jul 26 12:36 result.tar.gz
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 12:36 runtime_log.err
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas       655 Jul 26 12:36 NiyLDmsclz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRDRLDmt86ntn.diag
[2025-07-26 12:36:39] -rw-r--r--. 1 boincer umatlas     21105 Jul 26 12:36 stderr.txt
[2025-07-26 12:36:39] HITS file was successfully produced:
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas 209753289 Jul 26 12:35 shared/HITS.pool.root.1
[2025-07-26 12:36:39]  *** Contents of shared directory: ***
[2025-07-26 12:36:39] total 349388
[2025-07-26 12:36:39] -rw-r--r--. 2 boincer umatlas 146291343 Jul 26 10:06 ATLAS.root_0
[2025-07-26 12:36:39] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 10:06 input.tar.gz
[2025-07-26 12:36:39] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 10:06 start_atlas.sh
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas 209753289 Jul 26 12:35 HITS.pool.root.1
[2025-07-26 12:36:39] -rw-------. 1 boincer umatlas   1157120 Jul 26 12:36 result.tar.gz
12:36:41 (336294): run_atlas exited; CPU time 49443.586999
12:36:41 (336294): called boinc_finish(0)

</stderr_txt>
]]>

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