Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:34:05 (32440): wrapper (7.7.26015): starting
06:34:05 (32440): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 06:34:05] Arguments: --nthreads 8
[2025-07-26 06:34:05] Threads: 8
[2025-07-26 06:34:05] Checking for CVMFS
[2025-07-26 06:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:34:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:34:05] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:34:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:34:05] 2.11.2.0 2885 93349 74736 148774 2 58 10268191 20275201 1 130560 0 24244886 99.958 6923265 7895 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 06:34:05] CVMFS is ok
[2025-07-26 06:34:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:34:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:34:05] Further information can be found at the LHC@home message board.
[2025-07-26 06:34:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:34:05] Checking for apptainer binary...
[2025-07-26 06:34:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:34:05] Running /usr/bin/apptainer --version
[2025-07-26 06:34:05] apptainer version 1.3.2-1.el7
[2025-07-26 06:34:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:34:07] c-204-6.aglt2.org
[2025-07-26 06:34:07] apptainer works
[2025-07-26 06:34:07] Set ATHENA_PROC_NUMBER=8
[2025-07-26 06:34:07] Set ATHENA_CORE_NUMBER=8
[2025-07-26 06:34:07] Starting ATLAS job with PandaID=6745096360
[2025-07-26 06:34:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 09:04:40]  *** The last 200 lines of the pilot log: ***
[2025-07-26 09:04:40] 2025-07-26 13:04:21,107 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-07-26 09:04:40] 2025-07-26 13:04:22,468 | INFO     | monitor loop #664: job 0:6745096360 is in state 'finished'
[2025-07-26 09:04:40] 2025-07-26 13:04:22,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 09:04:40] 2025-07-26 13:04:24,976 | INFO     | monitor loop #665: job 0:6745096360 is in state 'finished'
[2025-07-26 09:04:40] 2025-07-26 13:04:24,976 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,171 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 09:04:40] 2025-07-26 13:04:26,174 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-07-26 09:04:40] 2025-07-26 13:04:26,176 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745096360/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,176 | INFO     | extracted standard info from prmon json
[2025-07-26 09:04:40] 2025-07-26 13:04:26,177 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 09:04:40] 2025-07-26 13:04:26,177 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 09:04:40] 2025-07-26 13:04:26,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 09:04:40] 2025-07-26 13:04:26,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 09:04:40] 2025-07-26 13:04:26,180 | INFO     | fitting pss+swap vs Time
[2025-07-26 09:04:40] 2025-07-26 13:04:26,180 | INFO     | sum of square deviations: 984941258.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,181 | INFO     | sum of deviations: 3894593312.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,181 | INFO     | mean x: 1753530551.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,181 | INFO     | mean y: 2521188.5850340137
[2025-07-26 09:04:40] 2025-07-26 13:04:26,182 | INFO     | -- intersect: -6931179984.802379
[2025-07-26 09:04:40] 2025-07-26 13:04:26,182 | INFO     | intersect: -6931179984.802379
[2025-07-26 09:04:40] 2025-07-26 13:04:26,182 | INFO     | chi2: 1.6574340346810201
[2025-07-26 09:04:40] 2025-07-26 13:04:26,182 | INFO     | sum of square deviations: 887813855.5
[2025-07-26 09:04:40] 2025-07-26 13:04:26,183 | INFO     | sum of deviations: 3902124890.500003
[2025-07-26 09:04:40] 2025-07-26 13:04:26,183 | INFO     | mean x: 1753530398.5
[2025-07-26 09:04:40] 2025-07-26 13:04:26,183 | INFO     | mean y: 2521200.7816901407
[2025-07-26 09:04:40] 2025-07-26 13:04:26,183 | INFO     | -- intersect: -7704606337.098055
[2025-07-26 09:04:40] 2025-07-26 13:04:26,184 | INFO     | intersect: -7704606337.098055
[2025-07-26 09:04:40] 2025-07-26 13:04:26,184 | INFO     | chi2: 1.6587181915954237
[2025-07-26 09:04:40] 2025-07-26 13:04:26,184 | INFO     | current chi2=1.6587181915954237 (change=-0.07747861378089022 %)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,184 | INFO     | right removable region: 141
[2025-07-26 09:04:40] 2025-07-26 13:04:26,184 | INFO     | sum of square deviations: 887813855.5
[2025-07-26 09:04:40] 2025-07-26 13:04:26,185 | INFO     | sum of deviations: -18700346934.50001
[2025-07-26 09:04:40] 2025-07-26 13:04:26,185 | INFO     | mean x: 1753530703.5
[2025-07-26 09:04:40] 2025-07-26 13:04:26,185 | INFO     | mean y: 2556109.6830985914
[2025-07-26 09:04:40] 2025-07-26 13:04:26,185 | INFO     | -- intersect: 36937812653.1623
[2025-07-26 09:04:40] 2025-07-26 13:04:26,186 | INFO     | intersect: 36937812653.1623
[2025-07-26 09:04:40] 2025-07-26 13:04:26,186 | INFO     | chi2: 0.1437536917278692
[2025-07-26 09:04:40] 2025-07-26 13:04:26,186 | INFO     | current chi2=0.1437536917278692 (change=91.32673224273839 %)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,186 | INFO     | sum of square deviations: 797291228.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,187 | INFO     | sum of deviations: -17738260271.999996
[2025-07-26 09:04:40] 2025-07-26 13:04:26,187 | INFO     | mean x: 1753530856.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,187 | INFO     | mean y: 2554391.7737226277
[2025-07-26 09:04:40] 2025-07-26 13:04:26,187 | INFO     | -- intersect: 39015383865.31077
[2025-07-26 09:04:40] 2025-07-26 13:04:26,187 | INFO     | intersect: 39015383865.31077
[2025-07-26 09:04:40] 2025-07-26 13:04:26,188 | INFO     | chi2: 0.12616102829141349
[2025-07-26 09:04:40] 2025-07-26 13:04:26,188 | INFO     | current chi2=0.12616102829141349 (change=12.238060271703661 %)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,188 | INFO     | left removable region: 20
[2025-07-26 09:04:40] 2025-07-26 13:04:26,188 | INFO     | sum of square deviations: 549294020.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,189 | INFO     | sum of deviations: -8374831702.999999
[2025-07-26 09:04:40] 2025-07-26 13:04:26,189 | INFO     | mean x: 1753530978.0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,189 | INFO     | mean y: 2538263.3305785125
[2025-07-26 09:04:40] 2025-07-26 13:04:26,189 | INFO     | -- intersect: 26737813529.47492
[2025-07-26 09:04:40] 2025-07-26 13:04:26,189 | INFO     | intersect: 26737813529.47492
[2025-07-26 09:04:40] 2025-07-26 13:04:26,189 | INFO     | chi2: 0.09307209687019286
[2025-07-26 09:04:40] 2025-07-26 13:04:26,190 | INFO     | -- intersect: 26737813529.47492
[2025-07-26 09:04:40] 2025-07-26 13:04:26,190 | INFO     | current memory leak: -15.25 B/s (using 121 data points, chi2=0.09)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,190 | INFO     | could have reported an average CPU frequency of 1993 MHz (8 samples)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,190 | INFO     | ..............................
[2025-07-26 09:04:40] 2025-07-26 13:04:26,190 | INFO     | . Timing measurements:
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . get job = 0 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . initial setup = 2 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . payload setup = 11 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . stage-in = 0 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . payload execution = 8962 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . stage-out = 1 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | . log creation = 0 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,191 | INFO     | ..............................
[2025-07-26 09:04:40] 2025-07-26 13:04:26,784 | INFO     | 
[2025-07-26 09:04:40] 2025-07-26 13:04:26,785 | INFO     | job summary report
[2025-07-26 09:04:40] 2025-07-26 13:04:26,785 | INFO     | --------------------------------------------------
[2025-07-26 09:04:40] 2025-07-26 13:04:26,785 | INFO     | PanDA job id: 6745096360
[2025-07-26 09:04:40] 2025-07-26 13:04:26,785 | INFO     | task id: 45743349
[2025-07-26 09:04:40] 2025-07-26 13:04:26,786 | INFO     | errors: (none)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,786 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 09:04:40] 2025-07-26 13:04:26,786 | INFO     | pilot state: finished 
[2025-07-26 09:04:40] 2025-07-26 13:04:26,786 | INFO     | transexitcode: 0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,786 | INFO     | exeerrorcode: 0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,786 | INFO     | exeerrordiag: 
[2025-07-26 09:04:40] 2025-07-26 13:04:26,787 | INFO     | exitcode: 0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,787 | INFO     | exitmsg: OK
[2025-07-26 09:04:40] 2025-07-26 13:04:26,787 | INFO     | cpuconsumptiontime: 66917 s
[2025-07-26 09:04:40] 2025-07-26 13:04:26,787 | INFO     | nevents: 400
[2025-07-26 09:04:40] 2025-07-26 13:04:26,787 | INFO     | neventsw: 0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,787 | INFO     | pid: 10205
[2025-07-26 09:04:40] 2025-07-26 13:04:26,788 | INFO     | pgrp: 10205
[2025-07-26 09:04:40] 2025-07-26 13:04:26,788 | INFO     | corecount: 8
[2025-07-26 09:04:40] 2025-07-26 13:04:26,788 | INFO     | event service: False
[2025-07-26 09:04:40] 2025-07-26 13:04:26,788 | INFO     | sizes: {0: 2397475, 6: 2397737, 11: 2397765, 8977: 2426083, 8978: 2435081, 8979: 2435137, 8985: 2435459}
[2025-07-26 09:04:40] 2025-07-26 13:04:26,788 | INFO     | --------------------------------------------------
[2025-07-26 09:04:40] 2025-07-26 13:04:26,788 | INFO     | 
[2025-07-26 09:04:40] 2025-07-26 13:04:26,789 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 09:04:40] 2025-07-26 13:04:26,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 09:04:40] 2025-07-26 13:04:26,824 | INFO     | job 6745096360 has completed (purged errors)
[2025-07-26 09:04:40] 2025-07-26 13:04:26,824 | INFO     | overall cleanup function is called
[2025-07-26 09:04:40] 2025-07-26 13:04:27,828 | INFO     | --- collectZombieJob: --- 10, [10205]
[2025-07-26 09:04:40] 2025-07-26 13:04:27,829 | INFO     | zombie collector waiting for pid 10205
[2025-07-26 09:04:40] 2025-07-26 13:04:27,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 09:04:40] 2025-07-26 13:04:27,835 | INFO     | collected zombie processes
[2025-07-26 09:04:40] 2025-07-26 13:04:27,835 | INFO     | will attempt to kill all subprocesses of pid=10205
[2025-07-26 09:04:40] 2025-07-26 13:04:27,931 | INFO     | process IDs to be killed: [10205] (in reverse order)
[2025-07-26 09:04:40] 2025-07-26 13:04:27,986 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 09:04:40] 2025-07-26 13:04:27,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 09:04:40] 2025-07-26 13:04:27,992 | INFO     | did not find any defunct processes belonging to 10205
[2025-07-26 09:04:40] 2025-07-26 13:04:27,995 | INFO     | did not find any defunct processes belonging to 10205
[2025-07-26 09:04:40] 2025-07-26 13:04:27,995 | INFO     | ready for new job
[2025-07-26 09:04:40] 2025-07-26 13:04:27,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 09:04:40] 2025-07-26 13:04:27,997 | INFO     | ***************************************
[2025-07-26 09:04:40] 2025-07-26 13:04:27,997 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 09:04:40] 2025-07-26 13:04:27,997 | INFO     | ***************************************
[2025-07-26 09:04:40] 2025-07-26 13:04:27,997 | INFO     | 
[2025-07-26 09:04:40] 2025-07-26 13:04:27,998 | INFO     | architecture information:
[2025-07-26 09:04:40] 2025-07-26 13:04:27,998 | INFO     | executing command: cat /etc/os-release
[2025-07-26 09:04:40] 2025-07-26 13:04:28,018 | INFO     | cat /etc/os-release:
[2025-07-26 09:04:40] NAME="CentOS Linux"
[2025-07-26 09:04:40] VERSION="7 (Core)"
[2025-07-26 09:04:40] ID="centos"
[2025-07-26 09:04:40] ID_LIKE="rhel fedora"
[2025-07-26 09:04:40] VERSION_ID="7"
[2025-07-26 09:04:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 09:04:40] ANSI_COLOR="0;31"
[2025-07-26 09:04:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 09:04:40] HOME_URL="https://www.centos.org/"
[2025-07-26 09:04:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 09:04:40] 
[2025-07-26 09:04:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 09:04:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 09:04:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 09:04:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 09:04:40] 
[2025-07-26 09:04:40] 2025-07-26 13:04:28,018 | INFO     | ***************************************
[2025-07-26 09:04:40] 2025-07-26 13:04:28,521 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 09:04:40] 2025-07-26 13:04:28,542 | INFO     | sufficient remaining disk space (18733858816 B)
[2025-07-26 09:04:40] 2025-07-26 13:04:28,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 09:04:40] 2025-07-26 13:04:28,543 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 09:04:40] 2025-07-26 13:04:28,543 | INFO     | update_server=False
[2025-07-26 09:04:40] 2025-07-26 13:04:28,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 09:04:40] 2025-07-26 13:04:28,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 09:04:40] 2025-07-26 13:04:28,544 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 09:04:40] 2025-07-26 13:04:28,544 | INFO     | aborting loop
[2025-07-26 09:04:40] 2025-07-26 13:04:28,544 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 09:04:40] 2025-07-26 13:04:28,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 09:04:40] 2025-07-26 13:04:28,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 09:04:40] 2025-07-26 13:04:28,824 | INFO     | all job control threads have been joined
[2025-07-26 09:04:40] 2025-07-26 13:04:29,197 | INFO     | all data control threads have been joined
[2025-07-26 09:04:40] 2025-07-26 13:04:29,299 | INFO     | all payload control threads have been joined
[2025-07-26 09:04:40] 2025-07-26 13:04:29,546 | INFO     | [job] retrieve thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:29,549 | INFO     | [job] job monitor thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:29,624 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:29,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:29,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 09:04:40] 2025-07-26 13:04:29,830 | INFO     | [job] control thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:29,878 | INFO     | [data] copytool_in thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:29,898 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:30,198 | INFO     | [data] control thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:30,301 | INFO     | [payload] control thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:30,466 | INFO     | [payload] validate_post thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:30,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 09:04:40] 2025-07-26 13:04:30,514 | INFO     | [payload] failed_post thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:30,898 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:30,901 | INFO     | [job] validate thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:31,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 09:04:40] 2025-07-26 13:04:31,811 | INFO     | [data] copytool_out thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:32,300 | INFO     | [job] queue monitor thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:34,509 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 09:04:40] 2025-07-26 13:04:35,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140426685003584)>', '<ExcThread(monitor, started 140425876719360)>']
[2025-07-26 09:04:40] 2025-07-26 13:04:35,577 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 09:04:40] 2025-07-26 13:04:35,578 | INFO     | [monitor] control thread has ended
[2025-07-26 09:04:40] 2025-07-26 13:04:40,505 | INFO     | all workflow threads have been joined
[2025-07-26 09:04:40] 2025-07-26 13:04:40,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 09:04:40] 2025-07-26 13:04:40,505 | INFO     | traces error code: 0
[2025-07-26 09:04:40] 2025-07-26 13:04:40,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 09:04:40] 2025-07-26 13:04:40,622 [wrapper] ==== pilot stdout END ====
[2025-07-26 09:04:40] 2025-07-26 13:04:40,627 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 09:04:40] 2025-07-26 13:04:40,631 [wrapper] pilotpid: 3747
[2025-07-26 09:04:40] 2025-07-26 13:04:40,636 [wrapper] Pilot exit status: 0
[2025-07-26 09:04:40] 2025-07-26 13:04:40,656 [wrapper] pandaids: 6745096360
[2025-07-26 09:04:40] 2025-07-26 13:04:40,704 [wrapper] cleanup supervisor_pilot 29668 3748
[2025-07-26 09:04:40] 2025-07-26 13:04:40,709 [wrapper] Test setup, not cleaning
[2025-07-26 09:04:40] 2025-07-26 13:04:40,714 [wrapper] apfmon messages muted
[2025-07-26 09:04:40] 2025-07-26 13:04:40,719 [wrapper] ==== wrapper stdout END ====
[2025-07-26 09:04:40] 2025-07-26 13:04:40,723 [wrapper] ==== wrapper stderr END ====
[2025-07-26 09:04:40]  *** Error codes and diagnostics ***
[2025-07-26 09:04:40]     "exeErrorCode": 0,
[2025-07-26 09:04:40]     "exeErrorDiag": "",
[2025-07-26 09:04:40]     "pilotErrorCode": 0,
[2025-07-26 09:04:40]     "pilotErrorDiag": "",
[2025-07-26 09:04:40]  *** Listing of results directory ***
[2025-07-26 09:04:40] total 357672
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas    530466 Jul 26 00:48 pilot3.tar.gz
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas      5112 Jul 26 00:50 queuedata.json
[2025-07-26 09:04:40] -rwx------ 1 boincer umatlas     36292 Jul 26 00:50 runpilot2-wrapper.sh
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas       100 Jul 26 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 09:04:40] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 06:34 run_atlas
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas       105 Jul 26 06:34 job.xml
[2025-07-26 09:04:40] -rw-r--r-- 2 boincer umatlas 143473126 Jul 26 06:34 EVNT.45743347._001822.pool.root.1
[2025-07-26 09:04:40] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 06:34 start_atlas.sh
[2025-07-26 09:04:40] drwxrwx--x 2 boincer umatlas      4096 Jul 26 06:34 shared
[2025-07-26 09:04:40] -rw-r--r-- 2 boincer umatlas    542898 Jul 26 06:34 input.tar.gz
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas         0 Jul 26 06:34 boinc_lockfile
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 06:34 pandaJob.out
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas    980133 Jul 26 06:34 agis_schedconf.cvmfs.json
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas   1593052 Jul 26 06:34 agis_ddmendpoints.agis.ALL.json
[2025-07-26 09:04:40] drwx------ 4 boincer umatlas      4096 Jul 26 06:34 pilot3
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas        95 Jul 26 09:03 pilot_heartbeat.json
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas 216612411 Jul 26 09:03 HITS.45743349._032387.pool.root.1
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas       529 Jul 26 09:03 boinc_task_state.xml
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas      1062 Jul 26 09:04 memory_monitor_summary.json
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas    337061 Jul 26 09:04 log.45743349._032387.job.log.tgz.1
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas      7841 Jul 26 09:04 heartbeat.json
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas      5824 Jul 26 09:04 init_data.xml
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 09:04 boinc_mmap_file
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas        27 Jul 26 09:04 wrapper_checkpoint.txt
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas      4480 Jul 26 09:04 pilotlog.txt
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas    812778 Jul 26 09:04 log.45743349._032387.job.log.1
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas       357 Jul 26 09:04 output.list
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas       620 Jul 26 09:04 runtime_log
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas   1167360 Jul 26 09:04 result.tar.gz
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas      8655 Jul 26 09:04 runtime_log.err
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas       659 Jul 26 09:04 3BWKDmo2lz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuIRLDmlu5AGn.diag
[2025-07-26 09:04:40] -rw-r--r-- 1 boincer umatlas     21038 Jul 26 09:04 stderr.txt
[2025-07-26 09:04:40] HITS file was successfully produced:
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas 216612411 Jul 26 09:03 shared/HITS.pool.root.1
[2025-07-26 09:04:40]  *** Contents of shared directory: ***
[2025-07-26 09:04:40] total 353336
[2025-07-26 09:04:40] -rw-r--r-- 2 boincer umatlas 143473126 Jul 26 06:34 ATLAS.root_0
[2025-07-26 09:04:40] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 06:34 start_atlas.sh
[2025-07-26 09:04:40] -rw-r--r-- 2 boincer umatlas    542898 Jul 26 06:34 input.tar.gz
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas 216612411 Jul 26 09:03 HITS.pool.root.1
[2025-07-26 09:04:40] -rw------- 1 boincer umatlas   1167360 Jul 26 09:04 result.tar.gz
09:04:42 (32440): run_atlas exited; CPU time 66876.504604
09:04:42 (32440): called boinc_finish(0)

</stderr_txt>
]]>

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