Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:27:12 (902927): wrapper (7.7.26015): starting
06:27:12 (902927): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 06:27:12] Arguments: --nthreads 8
[2025-07-26 06:27:12] Threads: 8
[2025-07-26 06:27:12] Checking for CVMFS
[2025-07-26 06:27:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:27:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:27:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:27:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:27:12] 2.13.1.0 3153527 6810 140996 148774 0 188 22013891 40960000 11546 16776704 0 89171750 99.999 249262 57981 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 06:27:12] CVMFS is ok
[2025-07-26 06:27:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:27:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:27:12] Further information can be found at the LHC@home message board.
[2025-07-26 06:27:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:27:12] Checking for apptainer binary...
[2025-07-26 06:27:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:27:12] Running /usr/bin/apptainer --version
[2025-07-26 06:27:12] apptainer version 1.4.1-1.el9
[2025-07-26 06:27:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:27:12] c-208-37.aglt2.org
[2025-07-26 06:27:12] apptainer works
[2025-07-26 06:27:12] Set ATHENA_PROC_NUMBER=8
[2025-07-26 06:27:12] Set ATHENA_CORE_NUMBER=8
[2025-07-26 06:27:12] Starting ATLAS job with PandaID=6745096056
[2025-07-26 06:27:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 07:22:19]  *** The last 200 lines of the pilot log: ***
[2025-07-26 07:22:19]  lfn=log.45743349._032159.job.log.tgz.1
[2025-07-26 07:22:19]  mtime=0
[2025-07-26 07:22:19]  protocol_id=None
[2025-07-26 07:22:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 07:22:19]  replicas=None
[2025-07-26 07:22:19]  scope=mc23_13p6TeV
[2025-07-26 07:22:19]  status=None
[2025-07-26 07:22:19]  status_code=0
[2025-07-26 07:22:19]  storage_token=
[2025-07-26 07:22:19]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6745096056/log.45743349._032159.job.log.tgz.1
[2025-07-26 07:22:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/cb/log.45743349._032159.job.log.tgz.1
[2025-07-26 07:22:19]  workdir=None
[2025-07-26 07:22:19] ]
[2025-07-26 07:22:19] 2025-07-26 11:21:43,528 | INFO     | transferring file log.45743349._032159.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6745096056/log.45743349._032159.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 07:22:19] 2025-07-26 11:21:43,528 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6745096056/log.45743349._032159.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._032159.job
[2025-07-26 07:22:19] 2025-07-26 11:21:43,544 | INFO     | adding to output.list: log.45743349._032159.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8d/cb/log.45743349._032159.job.log.tg
[2025-07-26 07:22:19] 2025-07-26 11:21:43,545 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 07:22:19] 2025-07-26 11:21:43,545 | INFO     | summary of transferred files:
[2025-07-26 07:22:19] 2025-07-26 11:21:43,545 | INFO     |  -- lfn=log.45743349._032159.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 07:22:19] 2025-07-26 11:21:43,545 | INFO     | stage-out finished correctly
[2025-07-26 07:22:19] 2025-07-26 11:21:43,603 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 07:22:19] 2025-07-26 11:21:43,657 | INFO     | job 6745096056 has state=finished
[2025-07-26 07:22:19] 2025-07-26 11:21:43,657 | INFO     | preparing for final server update for job 6745096056 in state='finished'
[2025-07-26 07:22:19] 2025-07-26 11:21:43,658 | INFO     | this job has now completed (state=finished)
[2025-07-26 07:22:19] 2025-07-26 11:21:43,658 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 07:22:19] 2025-07-26 11:21:43,658 | INFO     | log transfer has been attempted: DONE
[2025-07-26 07:22:19] 2025-07-26 11:21:43,658 | INFO     | job 6745096056 has finished - writing final server update
[2025-07-26 07:22:19] 2025-07-26 11:21:43,658 | INFO     | total number of processed events: 400 (read)
[2025-07-26 07:22:19] 2025-07-26 11:21:43,659 | INFO     | executing command: lscpu
[2025-07-26 07:22:19] 2025-07-26 11:21:43,712 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 07:22:19] 2025-07-26 11:21:43,770 | WARNING  | process 918640 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 07:22:19] 2025-07-26 11:21:43,771 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745096056/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 07:22:19] 2025-07-26 11:21:44,515 | INFO     | number of running child processes to parent process 918640: 1
[2025-07-26 07:22:19] 2025-07-26 11:21:44,515 | INFO     | maximum number of monitored processes: 6
[2025-07-26 07:22:19] 2025-07-26 11:21:44,618 | INFO     | PID=906554 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 07:22:19] 2025-07-26 11:21:44,618 | INFO     | .. there are 14 such processes running
[2025-07-26 07:22:19] 2025-07-26 11:21:46,519 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 07:22:19] 2025-07-26 11:21:46,524 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3649.272851562501
[2025-07-26 07:22:19] 2025-07-26 11:21:46,537 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745096056/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 07:22:19] 2025-07-26 11:21:46,537 | INFO     | extracted standard info from prmon json
[2025-07-26 07:22:19] 2025-07-26 11:21:46,537 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 07:22:19] 2025-07-26 11:21:46,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 07:22:19] 2025-07-26 11:21:46,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 07:22:19] 2025-07-26 11:21:46,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 07:22:19] 2025-07-26 11:21:46,538 | INFO     | fitting pss+swap vs Time
[2025-07-26 07:22:19] 2025-07-26 11:21:46,539 | INFO     | sum of square deviations: 32179208.0
[2025-07-26 07:22:19] 2025-07-26 11:21:46,539 | INFO     | sum of deviations: -253723094.99999994
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | mean x: 1753527371.0
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | mean y: 2522781.489361702
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | -- intersect: 13828543351.583351
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | intersect: 13828543351.583351
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | chi2: 0.0008958966264186095
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | -- intersect: 13828543351.583351
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | current memory leak: -7.88 B/s (using 47 data points, chi2=0.00)
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | could have reported an average CPU frequency of 3702 MHz (5 samples)
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | ..............................
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . Timing measurements:
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . get job = 0 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . initial setup = 2 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . payload setup = 4 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . stage-in = 0 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . payload execution = 3240 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . stage-out = 0 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,540 | INFO     | . log creation = 0 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,541 | INFO     | ..............................
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | 
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | job summary report
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | --------------------------------------------------
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | PanDA job id: 6745096056
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | task id: 45743349
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | errors: (none)
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | pilot state: finished 
[2025-07-26 07:22:19] 2025-07-26 11:21:46,926 | INFO     | transexitcode: 0
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | exeerrorcode: 0
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | exeerrordiag: 
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | exitcode: 0
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | exitmsg: OK
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | cpuconsumptiontime: 24131 s
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | nevents: 400
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | neventsw: 0
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | pid: 918640
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | pgrp: 918640
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | corecount: 8
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | event service: False
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | sizes: {0: 2397304, 1: 2397503, 4: 2397765, 11: 2397793, 3248: 2423316, 3249: 2432498, 3252: 2432668}
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | --------------------------------------------------
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | 
[2025-07-26 07:22:19] 2025-07-26 11:21:46,927 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 07:22:19] 2025-07-26 11:21:46,938 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,938 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,938 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | job 6745096056 has completed (purged errors)
[2025-07-26 07:22:19] 2025-07-26 11:21:46,939 | INFO     | overall cleanup function is called
[2025-07-26 07:22:19] 2025-07-26 11:21:47,947 | INFO     | --- collectZombieJob: --- 10, [918640]
[2025-07-26 07:22:19] 2025-07-26 11:21:47,947 | INFO     | zombie collector waiting for pid 918640
[2025-07-26 07:22:19] 2025-07-26 11:21:47,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 07:22:19] 2025-07-26 11:21:47,947 | INFO     | collected zombie processes
[2025-07-26 07:22:19] 2025-07-26 11:21:47,947 | INFO     | will attempt to kill all subprocesses of pid=918640
[2025-07-26 07:22:19] 2025-07-26 11:21:48,260 | INFO     | process IDs to be killed: [918640] (in reverse order)
[2025-07-26 07:22:19] 2025-07-26 11:21:48,366 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 07:22:19] 2025-07-26 11:21:48,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 07:22:19] 2025-07-26 11:21:48,381 | INFO     | did not find any defunct processes belonging to 918640
[2025-07-26 07:22:19] 2025-07-26 11:21:48,393 | INFO     | did not find any defunct processes belonging to 918640
[2025-07-26 07:22:19] 2025-07-26 11:21:48,394 | INFO     | ready for new job
[2025-07-26 07:22:19] 2025-07-26 11:21:48,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 07:22:19] 2025-07-26 11:21:48,395 | INFO     | ***************************************
[2025-07-26 07:22:19] 2025-07-26 11:21:48,395 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 07:22:19] 2025-07-26 11:21:48,395 | INFO     | ***************************************
[2025-07-26 07:22:19] 2025-07-26 11:21:48,395 | INFO     | 
[2025-07-26 07:22:19] 2025-07-26 11:21:48,400 | INFO     | architecture information:
[2025-07-26 07:22:19] 2025-07-26 11:21:48,400 | INFO     | executing command: cat /etc/os-release
[2025-07-26 07:22:19] 2025-07-26 11:21:48,411 | INFO     | cat /etc/os-release:
[2025-07-26 07:22:19] NAME="CentOS Linux"
[2025-07-26 07:22:19] VERSION="7 (Core)"
[2025-07-26 07:22:19] ID="centos"
[2025-07-26 07:22:19] ID_LIKE="rhel fedora"
[2025-07-26 07:22:19] VERSION_ID="7"
[2025-07-26 07:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 07:22:19] ANSI_COLOR="0;31"
[2025-07-26 07:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 07:22:19] HOME_URL="https://www.centos.org/"
[2025-07-26 07:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 07:22:19] 
[2025-07-26 07:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 07:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 07:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 07:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 07:22:19] 
[2025-07-26 07:22:19] 2025-07-26 11:21:48,411 | INFO     | ***************************************
[2025-07-26 07:22:19] 2025-07-26 11:21:48,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 07:22:19] 2025-07-26 11:21:48,926 | INFO     | sufficient remaining disk space (166695272448 B)
[2025-07-26 07:22:19] 2025-07-26 11:21:48,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 07:22:19] 2025-07-26 11:21:48,927 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 07:22:19] 2025-07-26 11:21:48,927 | INFO     | update_server=False
[2025-07-26 07:22:19] 2025-07-26 11:21:48,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 07:22:19] 2025-07-26 11:21:48,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:22:19] 2025-07-26 11:21:48,927 | INFO     | aborting loop
[2025-07-26 07:22:19] 2025-07-26 11:21:49,111 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 07:22:19] 2025-07-26 11:21:49,335 | INFO     | all data control threads have been joined
[2025-07-26 07:22:19] 2025-07-26 11:21:49,341 | INFO     | all payload control threads have been joined
[2025-07-26 07:22:19] 2025-07-26 11:21:49,392 | INFO     | all job control threads have been joined
[2025-07-26 07:22:19] 2025-07-26 11:21:49,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 07:22:19] 2025-07-26 11:21:49,929 | INFO     | [job] retrieve thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:49,932 | INFO     | [job] job monitor thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:50,170 | INFO     | [data] copytool_in thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:50,338 | INFO     | [payload] validate_post thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:50,341 | INFO     | [data] control thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:50,347 | INFO     | [payload] control thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:50,397 | INFO     | [job] control thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:50,942 | INFO     | [job] validate thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:51,048 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:51,117 | INFO     | [data] copytool_out thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:51,140 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:51,163 | INFO     | [payload] failed_post thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:51,387 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:51,605 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:22:19] 2025-07-26 11:21:52,610 | INFO     | [job] queue monitor thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:53,668 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:21:59,660 | INFO     | job.realtimelogging is not enabled
[2025-07-26 07:22:19] 2025-07-26 11:22:00,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 07:22:19] 2025-07-26 11:22:01,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828678645568)>', '<ExcThread(monitor, started 139828322608896)>']
[2025-07-26 07:22:19] 2025-07-26 11:22:06,928 | INFO     | all workflow threads have been joined
[2025-07-26 07:22:19] 2025-07-26 11:22:06,928 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 07:22:19] 2025-07-26 11:22:06,929 | INFO     | traces error code: 0
[2025-07-26 07:22:19] 2025-07-26 11:22:06,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 07:22:19] 2025-07-26 11:22:19,095 | INFO     | PID=906554 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 07:22:19] 2025-07-26 11:22:19,095 | INFO     | .. there are 15 such processes running
[2025-07-26 07:22:19] 2025-07-26 11:22:19,095 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 07:22:19] 2025-07-26 11:22:19,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 07:22:19] 2025-07-26 11:22:19,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 07:22:19] 2025-07-26 11:22:19,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 07:22:19] 2025-07-26 11:22:19,096 | INFO     | [monitor] control thread has ended
[2025-07-26 07:22:19] 2025-07-26 11:22:19,172 [wrapper] ==== pilot stdout END ====
[2025-07-26 07:22:19] 2025-07-26 11:22:19,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 07:22:19] 2025-07-26 11:22:19,177 [wrapper] pilotpid: 906554
[2025-07-26 07:22:19] 2025-07-26 11:22:19,179 [wrapper] Pilot exit status: 0
[2025-07-26 07:22:19] 2025-07-26 11:22:19,188 [wrapper] pandaids: 6745096056
[2025-07-26 07:22:19] 2025-07-26 11:22:19,264 [wrapper] cleanup supervisor_pilot 1129119 906555
[2025-07-26 07:22:19] 2025-07-26 11:22:19,266 [wrapper] Test setup, not cleaning
[2025-07-26 07:22:19] 2025-07-26 11:22:19,269 [wrapper] apfmon messages muted
[2025-07-26 07:22:19] 2025-07-26 11:22:19,271 [wrapper] ==== wrapper stdout END ====
[2025-07-26 07:22:19] 2025-07-26 11:22:19,273 [wrapper] ==== wrapper stderr END ====
[2025-07-26 07:22:19]  *** Error codes and diagnostics ***
[2025-07-26 07:22:19]     "exeErrorCode": 0,
[2025-07-26 07:22:19]     "exeErrorDiag": "",
[2025-07-26 07:22:19]     "pilotErrorCode": 0,
[2025-07-26 07:22:19]     "pilotErrorDiag": "",
[2025-07-26 07:22:19]  *** Listing of results directory ***
[2025-07-26 07:22:19] total 349472
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 26 00:24 pilot3.tar.gz
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 26 00:39 queuedata.json
[2025-07-26 07:22:19] -rwx------. 1 boincer umatlas     36292 Jul 26 00:40 runpilot2-wrapper.sh
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas       100 Jul 26 06:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 07:22:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 06:27 run_atlas
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas       105 Jul 26 06:27 job.xml
[2025-07-26 07:22:19] -rw-r--r--. 2 boincer umatlas 147356006 Jul 26 06:27 EVNT.45743347._001807.pool.root.1
[2025-07-26 07:22:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:27 start_atlas.sh
[2025-07-26 07:22:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 06:27 shared
[2025-07-26 07:22:19] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 06:27 input.tar.gz
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas         0 Jul 26 06:27 boinc_lockfile
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 06:27 pandaJob.out
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas    980133 Jul 26 06:27 agis_schedconf.cvmfs.json
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas   1593052 Jul 26 06:27 agis_ddmendpoints.agis.ALL.json
[2025-07-26 07:22:19] drwx------. 4 boincer umatlas      4096 Jul 26 06:27 pilot3
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 07:19 init_data.xml
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas 205391242 Jul 26 07:21 HITS.45743349._032159.pool.root.1
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas        95 Jul 26 07:21 pilot_heartbeat.json
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas       529 Jul 26 07:21 boinc_task_state.xml
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas      1027 Jul 26 07:21 memory_monitor_summary.json
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas    282077 Jul 26 07:21 log.45743349._032159.job.log.tgz.1
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas      7762 Jul 26 07:21 heartbeat.json
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas        27 Jul 26 07:22 wrapper_checkpoint.txt
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 07:22 boinc_mmap_file
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas       822 Jul 26 07:22 pilotlog.txt
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas    336833 Jul 26 07:22 log.45743349._032159.job.log.1
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas       357 Jul 26 07:22 output.list
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas       620 Jul 26 07:22 runtime_log
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas    634880 Jul 26 07:22 result.tar.gz
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 07:22 runtime_log.err
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas       652 Jul 26 07:22 27gMDmrslz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMFRLDmm3hXHm.diag
[2025-07-26 07:22:19] -rw-r--r--. 1 boincer umatlas     21713 Jul 26 07:22 stderr.txt
[2025-07-26 07:22:19] HITS file was successfully produced:
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas 205391242 Jul 26 07:21 shared/HITS.pool.root.1
[2025-07-26 07:22:19]  *** Contents of shared directory: ***
[2025-07-26 07:22:19] total 345660
[2025-07-26 07:22:19] -rw-r--r--. 2 boincer umatlas 147356006 Jul 26 06:27 ATLAS.root_0
[2025-07-26 07:22:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:27 start_atlas.sh
[2025-07-26 07:22:19] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 06:27 input.tar.gz
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas 205391242 Jul 26 07:21 HITS.pool.root.1
[2025-07-26 07:22:19] -rw-------. 1 boincer umatlas    634880 Jul 26 07:22 result.tar.gz
07:22:41 (902927): run_atlas exited; CPU time 24198.564844
07:22:41 (902927): called boinc_finish(0)

</stderr_txt>
]]>

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