Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
21:06:12 (2957659): wrapper (7.7.26015): starting
21:06:12 (2957659): wrapper: running run_atlas (--nthreads 6)
[2025-07-27 21:06:12] Arguments: --nthreads 6
[2025-07-27 21:06:12] Threads: 6
[2025-07-27 21:06:12] Checking for CVMFS
[2025-07-27 21:06:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 21:06:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 21:06:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 21:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 21:06:13] 2.12.7.0 1004224 7601 62616 148821 3 57 3696425 6144001 0 130560 0 5454092 99.989 278377 3536 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-27 21:06:13] CVMFS is ok
[2025-07-27 21:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 21:06:13] Checking for apptainer binary...
[2025-07-27 21:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-27 21:06:13] Running /usr/bin/apptainer --version
[2025-07-27 21:06:13] apptainer version 1.4.0
[2025-07-27 21:06:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 21:06:13] Beta
[2025-07-27 21:06:13] apptainer works
[2025-07-27 21:06:13] Set ATHENA_PROC_NUMBER=6
[2025-07-27 21:06:13] Set ATHENA_CORE_NUMBER=6
[2025-07-27 21:06:13] Starting ATLAS job with PandaID=6745095941
[2025-07-27 21:06:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 22:32:17]  *** The last 200 lines of the pilot log: ***
[2025-07-27 22:32:17]  is_altstaged=None
[2025-07-27 22:32:17]  is_tar=False
[2025-07-27 22:32:17]  lfn=log.45743349._032044.job.log.tgz.1
[2025-07-27 22:32:17]  mtime=0
[2025-07-27 22:32:17]  protocol_id=None
[2025-07-27 22:32:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-27 22:32:17]  replicas=None
[2025-07-27 22:32:17]  scope=mc23_13p6TeV
[2025-07-27 22:32:17]  status=None
[2025-07-27 22:32:17]  status_code=0
[2025-07-27 22:32:17]  storage_token=
[2025-07-27 22:32:17]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6745095941/log.45743349._032044.job.log.tgz.1
[2025-07-27 22:32:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/f8/log.45743349._032044.job.log.tgz.1
[2025-07-27 22:32:17]  workdir=None
[2025-07-27 22:32:17] ]
[2025-07-27 22:32:17] 2025-07-27 20:31:38,768 | INFO     | transferring file log.45743349._032044.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6745095941/log.45743349._032044.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-07-27 22:32:17] 2025-07-27 20:31:38,768 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6745095941/log.45743349._032044.job.log.tgz.1 /var/lib/boinc/slots/0/log.45743349._032044.job
[2025-07-27 22:32:17] 2025-07-27 20:31:38,777 | INFO     | adding to output.list: log.45743349._032044.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/f8/log.45743349._032044.job.log.tg
[2025-07-27 22:32:17] 2025-07-27 20:31:38,778 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-27 22:32:17] 2025-07-27 20:31:38,778 | INFO     | summary of transferred files:
[2025-07-27 22:32:17] 2025-07-27 20:31:38,778 | INFO     |  -- lfn=log.45743349._032044.job.log.tgz.1, status_code=0, status=transferred
[2025-07-27 22:32:17] 2025-07-27 20:31:38,778 | INFO     | stage-out finished correctly
[2025-07-27 22:32:17] 2025-07-27 20:31:39,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-27 22:32:17] 2025-07-27 20:31:41,632 | INFO     | job 6745095941 has state=finished
[2025-07-27 22:32:17] 2025-07-27 20:31:41,633 | INFO     | preparing for final server update for job 6745095941 in state='finished'
[2025-07-27 22:32:17] 2025-07-27 20:31:41,634 | INFO     | this job has now completed (state=finished)
[2025-07-27 22:32:17] 2025-07-27 20:31:41,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-27 22:32:17] 2025-07-27 20:31:41,635 | INFO     | log transfer has been attempted: DONE
[2025-07-27 22:32:17] 2025-07-27 20:31:41,635 | INFO     | job 6745095941 has finished - writing final server update
[2025-07-27 22:32:17] 2025-07-27 20:31:41,636 | INFO     | total number of processed events: 400 (read)
[2025-07-27 22:32:17] 2025-07-27 20:31:41,639 | INFO     | executing command: lscpu
[2025-07-27 22:32:17] 2025-07-27 20:31:41,656 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-27 22:32:17] 2025-07-27 20:31:41,710 | WARNING  | process 2967757 can no longer be monitored (due to stat problems) - aborting
[2025-07-27 22:32:17] 2025-07-27 20:31:41,710 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745095941/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:32:17] 2025-07-27 20:31:41,755 | INFO     | number of running child processes to parent process 2967757: 1
[2025-07-27 22:32:17] 2025-07-27 20:31:41,755 | INFO     | maximum number of monitored processes: 6
[2025-07-27 22:32:17] 2025-07-27 20:31:44,258 | INFO     | monitor loop #393: job 0:6745095941 is in state 'finished'
[2025-07-27 22:32:17] 2025-07-27 20:31:44,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,255 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 22:32:17] 2025-07-27 20:31:45,256 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3700.8075000000003
[2025-07-27 22:32:17] 2025-07-27 20:31:45,257 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745095941/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,257 | INFO     | extracted standard info from prmon json
[2025-07-27 22:32:17] 2025-07-27 20:31:45,257 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 22:32:17] 2025-07-27 20:31:45,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 22:32:17] 2025-07-27 20:31:45,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 22:32:17] 2025-07-27 20:31:45,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 22:32:17] 2025-07-27 20:31:45,258 | INFO     | fitting pss+swap vs Time
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | sum of square deviations: 141539398.0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | sum of deviations: -508867795.0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | mean x: 1753645819.0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | mean y: 2521531.2207792206
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | -- intersect: 6307295281.392439
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | intersect: 6307295281.392439
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | chi2: 0.05665625754785902
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | -- intersect: 6307295281.392439
[2025-07-27 22:32:17] 2025-07-27 20:31:45,259 | INFO     | current memory leak: -3.60 B/s (using 77 data points, chi2=0.06)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | could have reported an average CPU frequency of 3702 MHz (6 samples)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | ..............................
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . Timing measurements:
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . get job = 0 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . initial setup = 1 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . payload setup = 3 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . stage-in = 0 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . payload execution = 5100 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . stage-out = 0 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | . log creation = 0 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,260 | INFO     | ..............................
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | 
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | job summary report
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | --------------------------------------------------
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | PanDA job id: 6745095941
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | task id: 45743349
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | errors: (none)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | pilot state: finished 
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | transexitcode: 0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | exeerrorcode: 0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | exeerrordiag: 
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | exitcode: 0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | exitmsg: OK
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | cpuconsumptiontime: 29349 s
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | nevents: 400
[2025-07-27 22:32:17] 2025-07-27 20:31:45,306 | INFO     | neventsw: 0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | pid: 2967757
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | pgrp: 2967757
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | corecount: 6
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | event service: False
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | sizes: {0: 2396647, 1: 2397503, 3: 2397765, 11: 2397793, 5107: 2424229, 5108: 2433227, 5109: 2433411, 5115: 2433605}
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | --------------------------------------------------
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | 
[2025-07-27 22:32:17] 2025-07-27 20:31:45,307 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 22:32:17] 2025-07-27 20:31:45,315 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 22:32:17] 2025-07-27 20:31:45,317 | INFO     | job 6745095941 has completed (purged errors)
[2025-07-27 22:32:17] 2025-07-27 20:31:45,317 | INFO     | overall cleanup function is called
[2025-07-27 22:32:17] 2025-07-27 20:31:46,323 | INFO     | --- collectZombieJob: --- 10, [2967757]
[2025-07-27 22:32:17] 2025-07-27 20:31:46,324 | INFO     | zombie collector waiting for pid 2967757
[2025-07-27 22:32:17] 2025-07-27 20:31:46,324 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 22:32:17] 2025-07-27 20:31:46,324 | INFO     | collected zombie processes
[2025-07-27 22:32:17] 2025-07-27 20:31:46,324 | INFO     | will attempt to kill all subprocesses of pid=2967757
[2025-07-27 22:32:17] 2025-07-27 20:31:46,381 | INFO     | process IDs to be killed: [2967757] (in reverse order)
[2025-07-27 22:32:17] 2025-07-27 20:31:46,403 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 22:32:17] 2025-07-27 20:31:46,404 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 22:32:17] 2025-07-27 20:31:46,405 | INFO     | did not find any defunct processes belonging to 2967757
[2025-07-27 22:32:17] 2025-07-27 20:31:46,406 | INFO     | did not find any defunct processes belonging to 2967757
[2025-07-27 22:32:17] 2025-07-27 20:31:46,406 | INFO     | ready for new job
[2025-07-27 22:32:17] 2025-07-27 20:31:46,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 22:32:17] 2025-07-27 20:31:46,407 | INFO     | ***************************************
[2025-07-27 22:32:17] 2025-07-27 20:31:46,407 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 22:32:17] 2025-07-27 20:31:46,407 | INFO     | ***************************************
[2025-07-27 22:32:17] 2025-07-27 20:31:46,407 | INFO     | 
[2025-07-27 22:32:17] 2025-07-27 20:31:46,408 | INFO     | architecture information:
[2025-07-27 22:32:17] 2025-07-27 20:31:46,408 | INFO     | executing command: cat /etc/os-release
[2025-07-27 22:32:17] 2025-07-27 20:31:46,414 | INFO     | cat /etc/os-release:
[2025-07-27 22:32:17] NAME="CentOS Linux"
[2025-07-27 22:32:17] VERSION="7 (Core)"
[2025-07-27 22:32:17] ID="centos"
[2025-07-27 22:32:17] ID_LIKE="rhel fedora"
[2025-07-27 22:32:17] VERSION_ID="7"
[2025-07-27 22:32:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 22:32:17] ANSI_COLOR="0;31"
[2025-07-27 22:32:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 22:32:17] HOME_URL="https://www.centos.org/"
[2025-07-27 22:32:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 22:32:17] 
[2025-07-27 22:32:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 22:32:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 22:32:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 22:32:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 22:32:17] 
[2025-07-27 22:32:17] 2025-07-27 20:31:46,414 | INFO     | ***************************************
[2025-07-27 22:32:17] 2025-07-27 20:31:46,918 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 22:32:17] 2025-07-27 20:31:46,930 | INFO     | sufficient remaining disk space (267184504832 B)
[2025-07-27 22:32:17] 2025-07-27 20:31:46,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 22:32:17] 2025-07-27 20:31:46,931 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 22:32:17] 2025-07-27 20:31:46,931 | INFO     | update_server=False
[2025-07-27 22:32:17] 2025-07-27 20:31:46,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 22:32:17] 2025-07-27 20:31:46,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 22:32:17] 2025-07-27 20:31:46,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:32:17] 2025-07-27 20:31:47,203 | INFO     | all data control threads have been joined
[2025-07-27 22:32:17] 2025-07-27 20:31:47,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 22:32:17] 2025-07-27 20:31:47,767 | INFO     | aborting loop
[2025-07-27 22:32:17] 2025-07-27 20:31:47,936 | INFO     | [job] retrieve thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:47,937 | INFO     | [job] queue monitor thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,004 | INFO     | [data] copytool_in thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,016 | INFO     | [payload] validate_post thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,209 | INFO     | [data] control thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,267 | INFO     | all payload control threads have been joined
[2025-07-27 22:32:17] 2025-07-27 20:31:48,375 | INFO     | all job control threads have been joined
[2025-07-27 22:32:17] 2025-07-27 20:31:48,509 | INFO     | [payload] failed_post thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,773 | INFO     | [job] job monitor thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,783 | INFO     | [job] validate thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,882 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,936 | INFO     | [data] copytool_out thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,949 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:48,953 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:49,273 | INFO     | [payload] control thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:49,381 | INFO     | [job] control thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:49,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 22:32:17] 2025-07-27 20:31:53,764 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 22:32:17] 2025-07-27 20:31:54,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616126109504)>', '<ExcThread(monitor, started 140615249540864)>']
[2025-07-27 22:32:17] 2025-07-27 20:31:59,085 | INFO     | all workflow threads have been joined
[2025-07-27 22:32:17] 2025-07-27 20:31:59,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 22:32:17] 2025-07-27 20:31:59,086 | INFO     | traces error code: 0
[2025-07-27 22:32:17] 2025-07-27 20:31:59,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 22:32:17] 2025-07-27 20:32:17,245 | INFO     | PID=2961287 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 22:32:17] 2025-07-27 20:32:17,246 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 22:32:17] 2025-07-27 20:32:17,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 22:32:17] 2025-07-27 20:32:17,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 22:32:17] 2025-07-27 20:32:17,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 22:32:17] 2025-07-27 20:32:17,246 | INFO     | [monitor] control thread has ended
[2025-07-27 22:32:17] 2025-07-27 20:32:17,308 [wrapper] ==== pilot stdout END ====
[2025-07-27 22:32:17] 2025-07-27 20:32:17,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 22:32:17] 2025-07-27 20:32:17,312 [wrapper] pilotpid: 2961287
[2025-07-27 22:32:17] 2025-07-27 20:32:17,313 [wrapper] Pilot exit status: 0
[2025-07-27 22:32:17] 2025-07-27 20:32:17,319 [wrapper] pandaids: 6745095941
[2025-07-27 22:32:17] 2025-07-27 20:32:17,334 [wrapper] cleanup supervisor_pilot 2979542 2961288
[2025-07-27 22:32:17] 2025-07-27 20:32:17,336 [wrapper] Test setup, not cleaning
[2025-07-27 22:32:17] 2025-07-27 20:32:17,338 [wrapper] apfmon messages muted
[2025-07-27 22:32:17] 2025-07-27 20:32:17,339 [wrapper] ==== wrapper stdout END ====
[2025-07-27 22:32:17] 2025-07-27 20:32:17,341 [wrapper] ==== wrapper stderr END ====
[2025-07-27 22:32:17]  *** Error codes and diagnostics ***
[2025-07-27 22:32:17]     "exeErrorCode": 0,
[2025-07-27 22:32:17]     "exeErrorDiag": "",
[2025-07-27 22:32:17]     "pilotErrorCode": 0,
[2025-07-27 22:32:17]     "pilotErrorDiag": "",
[2025-07-27 22:32:17]  *** Listing of results directory ***
[2025-07-27 22:32:17] insgesamt 354824
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc    530466 26. Jul 05:54 pilot3.tar.gz
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc      5112 26. Jul 06:22 queuedata.json
[2025-07-27 22:32:17] -rwx------ 1 boinc boinc     36292 26. Jul 06:23 runpilot2-wrapper.sh
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc       100 27. Jul 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 22:32:17] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 21:06 run_atlas
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc       105 27. Jul 21:06 job.xml
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc      6722 27. Jul 21:06 init_data.xml
[2025-07-27 22:32:17] -rw-r--r-- 2 boinc boinc 146291343 27. Jul 21:06 EVNT.45743347._001799.pool.root.1
[2025-07-27 22:32:17] drwxrwx--x 2 boinc boinc      4096 27. Jul 21:06 shared
[2025-07-27 22:32:17] -rw-r--r-- 2 boinc boinc    542892 27. Jul 21:06 input.tar.gz
[2025-07-27 22:32:17] -rw-r--r-- 2 boinc boinc     15095 27. Jul 21:06 start_atlas.sh
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc         0 27. Jul 21:06 boinc_lockfile
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc      2563 27. Jul 21:06 pandaJob.out
[2025-07-27 22:32:17] -rw------- 1 boinc boinc    980125 27. Jul 21:06 agis_schedconf.cvmfs.json
[2025-07-27 22:32:17] -rw------- 1 boinc boinc   1593052 27. Jul 21:06 agis_ddmendpoints.agis.ALL.json
[2025-07-27 22:32:17] drwx------ 4 boinc boinc      4096 27. Jul 21:06 pilot3
[2025-07-27 22:32:17] -rw------- 1 boinc boinc 211633265 27. Jul 22:31 HITS.45743349._032044.pool.root.1
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc       529 27. Jul 22:31 boinc_task_state.xml
[2025-07-27 22:32:17] -rw------- 1 boinc boinc      1019 27. Jul 22:31 memory_monitor_summary.json
[2025-07-27 22:32:17] -rw------- 1 boinc boinc    273644 27. Jul 22:31 log.45743349._032044.job.log.tgz.1
[2025-07-27 22:32:17] -rw------- 1 boinc boinc      7746 27. Jul 22:31 heartbeat.json
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc      8192 27. Jul 22:32 boinc_mmap_file
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc        27 27. Jul 22:32 wrapper_checkpoint.txt
[2025-07-27 22:32:17] -rw------- 1 boinc boinc       747 27. Jul 22:32 pilotlog.txt
[2025-07-27 22:32:17] -rw------- 1 boinc boinc        95 27. Jul 22:32 pilot_heartbeat.json
[2025-07-27 22:32:17] -rw------- 1 boinc boinc    493075 27. Jul 22:32 log.45743349._032044.job.log.1
[2025-07-27 22:32:17] -rw------- 1 boinc boinc       357 27. Jul 22:32 output.list
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc       620 27. Jul 22:32 runtime_log
[2025-07-27 22:32:17] -rw------- 1 boinc boinc    788480 27. Jul 22:32 result.tar.gz
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc      8602 27. Jul 22:32 runtime_log.err
[2025-07-27 22:32:17] -rw------- 1 boinc boinc       638 27. Jul 22:32 AK4LDmsclz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVDRLDmBEFyEo.diag
[2025-07-27 22:32:17] -rw-r--r-- 1 boinc boinc     21217 27. Jul 22:32 stderr.txt
[2025-07-27 22:32:17] HITS file was successfully produced:
[2025-07-27 22:32:17] -rw------- 1 boinc boinc 211633265 27. Jul 22:31 shared/HITS.pool.root.1
[2025-07-27 22:32:17]  *** Contents of shared directory: ***
[2025-07-27 22:32:17] insgesamt 350868
[2025-07-27 22:32:17] -rw-r--r-- 2 boinc boinc 146291343 27. Jul 21:06 ATLAS.root_0
[2025-07-27 22:32:17] -rw-r--r-- 2 boinc boinc    542892 27. Jul 21:06 input.tar.gz
[2025-07-27 22:32:17] -rw-r--r-- 2 boinc boinc     15095 27. Jul 21:06 start_atlas.sh
[2025-07-27 22:32:17] -rw------- 1 boinc boinc 211633265 27. Jul 22:31 HITS.pool.root.1
[2025-07-27 22:32:17] -rw------- 1 boinc boinc    788480 27. Jul 22:32 result.tar.gz
22:32:19 (2957659): run_atlas exited; CPU time 29401.401653
22:32:19 (2957659): called boinc_finish(0)

</stderr_txt>
]]>

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