Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:49 (2247034): wrapper (7.7.26015): starting
16:44:49 (2247034): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 16:44:49] Arguments: --nthreads 12
[2025-07-26 16:44:49] Threads: 12
[2025-07-26 16:44:49] Checking for CVMFS
[2025-07-26 16:44:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 16:44:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 16:44:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 16:44:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 16:44:50] 2.9.2.0 1254439 2650 63196 148780 3 56 22985692 36864001 0 130560 0 2465988 99.991 98527 1287 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 16:44:50] CVMFS is ok
[2025-07-26 16:44:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 16:44:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 16:44:50] Further information can be found at the LHC@home message board.
[2025-07-26 16:44:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 16:44:50] Checking for apptainer binary...
[2025-07-26 16:44:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 16:44:50] Running /usr/bin/apptainer --version
[2025-07-26 16:44:50] apptainer version 1.4.1-1.1
[2025-07-26 16:44:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 16:44:50] thserv06
[2025-07-26 16:44:50] apptainer works
[2025-07-26 16:44:51] Set ATHENA_PROC_NUMBER=12
[2025-07-26 16:44:51] Set ATHENA_CORE_NUMBER=12
[2025-07-26 16:44:51] Starting ATLAS job with PandaID=6745095453
[2025-07-26 16:44:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 17:56:19]  *** The last 200 lines of the pilot log: ***
[2025-07-26 17:56:19]  is_tar=False
[2025-07-26 17:56:19]  lfn=log.45743349._031763.job.log.tgz.1
[2025-07-26 17:56:19]  mtime=0
[2025-07-26 17:56:19]  protocol_id=None
[2025-07-26 17:56:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 17:56:19]  replicas=None
[2025-07-26 17:56:19]  scope=mc23_13p6TeV
[2025-07-26 17:56:19]  status=None
[2025-07-26 17:56:19]  status_code=0
[2025-07-26 17:56:19]  storage_token=
[2025-07-26 17:56:19]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745095453/log.45743349._031763.job.log.tgz.1
[2025-07-26 17:56:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/a4/log.45743349._031763.job.log.tgz.1
[2025-07-26 17:56:19]  workdir=None
[2025-07-26 17:56:19] ]
[2025-07-26 17:56:19] 2025-07-26 15:50:47,073 | INFO     | transferring file log.45743349._031763.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745095453/log.45743349._031763.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 17:56:19] 2025-07-26 15:50:47,073 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745095453/log.45743349._031763.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0317
[2025-07-26 17:56:19] 2025-07-26 15:50:47,092 | INFO     | adding to output.list: log.45743349._031763.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/a4/log.45743349._031763.job.log.tg
[2025-07-26 17:56:19] 2025-07-26 15:50:47,093 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 17:56:19] 2025-07-26 15:50:47,093 | INFO     | summary of transferred files:
[2025-07-26 17:56:19] 2025-07-26 15:50:47,093 | INFO     |  -- lfn=log.45743349._031763.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 17:56:19] 2025-07-26 15:50:47,093 | INFO     | stage-out finished correctly
[2025-07-26 17:56:19] 2025-07-26 15:50:47,479 | INFO     | monitor loop #299: job 0:6745095453 is in state 'finished'
[2025-07-26 17:56:19] 2025-07-26 15:50:47,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:56:19] 2025-07-26 15:50:48,024 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 17:56:19] 2025-07-26 15:50:49,982 | INFO     | monitor loop #300: job 0:6745095453 is in state 'finished'
[2025-07-26 17:56:19] 2025-07-26 15:50:49,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:56:19] 2025-07-26 15:50:50,246 | INFO     | job 6745095453 has state=finished
[2025-07-26 17:56:19] 2025-07-26 15:50:50,246 | INFO     | preparing for final server update for job 6745095453 in state='finished'
[2025-07-26 17:56:19] 2025-07-26 15:50:50,247 | INFO     | this job has now completed (state=finished)
[2025-07-26 17:56:19] 2025-07-26 15:50:50,248 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 17:56:19] 2025-07-26 15:50:50,248 | INFO     | log transfer has been attempted: DONE
[2025-07-26 17:56:19] 2025-07-26 15:50:50,248 | INFO     | job 6745095453 has finished - writing final server update
[2025-07-26 17:56:19] 2025-07-26 15:50:50,248 | INFO     | total number of processed events: 400 (read)
[2025-07-26 17:56:19] 2025-07-26 15:50:50,249 | INFO     | executing command: lscpu
[2025-07-26 17:56:19] 2025-07-26 15:50:50,293 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 17:56:19] 2025-07-26 15:50:52,487 | INFO     | monitor loop #301: job 0:6745095453 is in state 'finished'
[2025-07-26 17:56:19] 2025-07-26 15:50:52,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 17:56:19] 2025-07-26 15:50:54,943 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 17:56:19] 2025-07-26 15:50:54,951 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2300.519609375
[2025-07-26 17:56:19] 2025-07-26 15:50:54,958 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745095453/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 17:56:19] 2025-07-26 15:50:54,959 | INFO     | extracted standard info from prmon json
[2025-07-26 17:56:19] 2025-07-26 15:50:54,959 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 17:56:19] 2025-07-26 15:50:54,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 17:56:19] 2025-07-26 15:50:54,960 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 17:56:19] 2025-07-26 15:50:54,960 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | fitting pss+swap vs Time
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | sum of square deviations: 57407588.0
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | sum of deviations: -4170570366.0
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | mean x: 1753543151.0
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | mean y: 2852992.298245614
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | -- intersect: 127394986259.81792
[2025-07-26 17:56:19] 2025-07-26 15:50:54,961 | INFO     | intersect: 127394986259.81792
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | chi2: 0.05085344202404589
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | -- intersect: 127394986259.81792
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | current memory leak: -72.65 B/s (using 57 data points, chi2=0.05)
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | could have reported an average CPU frequency of 1422 MHz (6 samples)
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | ..............................
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . Timing measurements:
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . get job = 0 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . initial setup = 1 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . payload setup = 9 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . stage-in = 0 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . payload execution = 3911 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . stage-out = 0 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | . log creation = 0 s
[2025-07-26 17:56:19] 2025-07-26 15:50:54,962 | INFO     | ..............................
[2025-07-26 17:56:19] 2025-07-26 15:50:55,038 | INFO     | 
[2025-07-26 17:56:19] 2025-07-26 15:50:55,038 | INFO     | job summary report
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | --------------------------------------------------
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | PanDA job id: 6745095453
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | task id: 45743349
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | errors: (none)
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | pilot state: finished 
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | transexitcode: 0
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | exeerrorcode: 0
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | exeerrordiag: 
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | exitcode: 0
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | exitmsg: OK
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | cpuconsumptiontime: 39924 s
[2025-07-26 17:56:19] 2025-07-26 15:50:55,039 | INFO     | nevents: 400
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | neventsw: 0
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | pid: 2257859
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | pgrp: 2257859
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | corecount: 12
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | event service: False
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | sizes: {0: 2397251, 1: 2397506, 8: 2397768, 12: 2397796, 3924: 2423591, 3926: 2432595, 3927: 2432779, 3934: 2432973}
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | --------------------------------------------------
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | 
[2025-07-26 17:56:19] 2025-07-26 15:50:55,040 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 17:56:19] 2025-07-26 15:50:55,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 17:56:19] 2025-07-26 15:50:55,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 17:56:19] 2025-07-26 15:50:55,064 | INFO     | job 6745095453 has completed (purged errors)
[2025-07-26 17:56:19] 2025-07-26 15:50:55,064 | INFO     | overall cleanup function is called
[2025-07-26 17:56:19] 2025-07-26 15:50:56,072 | INFO     | --- collectZombieJob: --- 10, [2257859]
[2025-07-26 17:56:19] 2025-07-26 15:50:56,072 | INFO     | zombie collector waiting for pid 2257859
[2025-07-26 17:56:19] 2025-07-26 15:50:56,072 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 17:56:19] 2025-07-26 15:50:56,072 | INFO     | collected zombie processes
[2025-07-26 17:56:19] 2025-07-26 15:50:56,072 | INFO     | will attempt to kill all subprocesses of pid=2257859
[2025-07-26 17:56:19] 2025-07-26 15:50:56,230 | INFO     | process IDs to be killed: [2257859] (in reverse order)
[2025-07-26 17:56:19] 2025-07-26 15:50:56,286 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 17:56:19] 2025-07-26 15:50:56,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 17:56:19] 2025-07-26 15:50:56,290 | INFO     | did not find any defunct processes belonging to 2257859
[2025-07-26 17:56:19] 2025-07-26 15:50:56,295 | INFO     | did not find any defunct processes belonging to 2257859
[2025-07-26 17:56:19] 2025-07-26 15:50:56,295 | INFO     | ready for new job
[2025-07-26 17:56:19] 2025-07-26 15:50:56,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 17:56:19] 2025-07-26 15:50:56,296 | INFO     | ***************************************
[2025-07-26 17:56:19] 2025-07-26 15:50:56,297 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 17:56:19] 2025-07-26 15:50:56,297 | INFO     | ***************************************
[2025-07-26 17:56:19] 2025-07-26 15:50:56,297 | INFO     | 
[2025-07-26 17:56:19] 2025-07-26 15:50:56,300 | INFO     | architecture information:
[2025-07-26 17:56:19] 2025-07-26 15:50:56,300 | INFO     | executing command: cat /etc/os-release
[2025-07-26 17:56:19] 2025-07-26 15:50:56,322 | INFO     | cat /etc/os-release:
[2025-07-26 17:56:19] NAME="CentOS Linux"
[2025-07-26 17:56:19] VERSION="7 (Core)"
[2025-07-26 17:56:19] ID="centos"
[2025-07-26 17:56:19] ID_LIKE="rhel fedora"
[2025-07-26 17:56:19] VERSION_ID="7"
[2025-07-26 17:56:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 17:56:19] ANSI_COLOR="0;31"
[2025-07-26 17:56:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 17:56:19] HOME_URL="https://www.centos.org/"
[2025-07-26 17:56:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 17:56:19] 
[2025-07-26 17:56:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 17:56:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 17:56:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 17:56:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 17:56:19] 
[2025-07-26 17:56:19] 2025-07-26 15:50:56,322 | INFO     | ***************************************
[2025-07-26 17:56:19] 2025-07-26 15:50:56,825 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 17:56:19] 2025-07-26 15:50:56,909 | INFO     | sufficient remaining disk space (464452059136 B)
[2025-07-26 17:56:19] 2025-07-26 15:50:56,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 17:56:19] 2025-07-26 15:50:56,910 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 17:56:19] 2025-07-26 15:50:56,910 | INFO     | update_server=False
[2025-07-26 17:56:19] 2025-07-26 15:50:56,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 17:56:19] 2025-07-26 15:50:56,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:56:19] 2025-07-26 15:50:56,911 | INFO     | aborting loop
[2025-07-26 17:56:19] 2025-07-26 15:50:56,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 17:56:19] 2025-07-26 15:50:56,926 | INFO     | all job control threads have been joined
[2025-07-26 17:56:19] 2025-07-26 15:50:57,227 | INFO     | all data control threads have been joined
[2025-07-26 17:56:19] 2025-07-26 15:50:57,666 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 17:56:19] 2025-07-26 15:50:57,916 | INFO     | [job] retrieve thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:57,917 | INFO     | [job] queue monitor thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:57,921 | INFO     | [job] job monitor thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:57,932 | INFO     | [job] control thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:57,974 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:58,204 | INFO     | all payload control threads have been joined
[2025-07-26 17:56:19] 2025-07-26 15:50:58,233 | INFO     | [data] control thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:58,392 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:58,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 17:56:19] 2025-07-26 15:50:58,879 | INFO     | [job] validate thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:58,909 | INFO     | [data] copytool_in thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:59,022 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:59,210 | INFO     | [payload] control thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:59,324 | INFO     | [payload] validate_post thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:59,396 | INFO     | [payload] failed_post thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:50:59,673 | INFO     | [data] copytool_out thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:51:02,666 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:51:07,227 | INFO     | job.realtimelogging is not enabled
[2025-07-26 17:56:19] 2025-07-26 15:51:08,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 17:56:19] 2025-07-26 15:51:08,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140407400716096)>', '<ExcThread(monitor, started 140406775871232)>']
[2025-07-26 17:56:19] 2025-07-26 15:51:13,792 | INFO     | all workflow threads have been joined
[2025-07-26 17:56:19] 2025-07-26 15:51:13,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 17:56:19] 2025-07-26 15:51:13,792 | INFO     | traces error code: 0
[2025-07-26 17:56:19] 2025-07-26 15:51:13,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 17:56:19] 2025-07-26 15:51:27,812 | INFO     | PID=2250922 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 17:56:19] 2025-07-26 15:51:27,813 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 17:56:19] 2025-07-26 15:51:27,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 17:56:19] 2025-07-26 15:51:27,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 17:56:19] 2025-07-26 15:51:27,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 17:56:19] 2025-07-26 15:51:27,814 | INFO     | [monitor] control thread has ended
[2025-07-26 17:56:19] 2025-07-26 15:51:27,937 [wrapper] ==== pilot stdout END ====
[2025-07-26 17:56:19] 2025-07-26 15:51:27,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 17:56:19] 2025-07-26 15:51:27,946 [wrapper] pilotpid: 2250922
[2025-07-26 17:56:19] 2025-07-26 15:51:27,978 [wrapper] Pilot exit status: 0
[2025-07-26 17:56:19] 2025-07-26 15:51:27,998 [wrapper] pandaids: 6745095453
[2025-07-26 17:56:19] 2025-07-26 15:51:28,065 [wrapper] cleanup supervisor_pilot 2268425 2250923
[2025-07-26 17:56:19] 2025-07-26 15:51:28,068 [wrapper] Test setup, not cleaning
[2025-07-26 17:56:19] 2025-07-26 15:51:28,070 [wrapper] apfmon messages muted
[2025-07-26 17:56:19] 2025-07-26 15:51:28,073 [wrapper] ==== wrapper stdout END ====
[2025-07-26 17:56:19] 2025-07-26 15:51:28,075 [wrapper] ==== wrapper stderr END ====
[2025-07-26 17:56:19]  *** Error codes and diagnostics ***
[2025-07-26 17:56:19]     "exeErrorCode": 0,
[2025-07-26 17:56:19]     "exeErrorDiag": "",
[2025-07-26 17:56:19]     "pilotErrorCode": 0,
[2025-07-26 17:56:19]     "pilotErrorDiag": "",
[2025-07-26 17:56:19]  *** Listing of results directory ***
[2025-07-26 17:56:19] total 360580
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc    530466 Jul 26 05:54 pilot3.tar.gz
[2025-07-26 17:56:19] -rwx------ 1 boinc boinc     36292 Jul 26 05:56 runpilot2-wrapper.sh
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc      5112 Jul 26 05:56 queuedata.json
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc       100 Jul 26 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 17:56:19] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 16:44 run_atlas
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc       105 Jul 26 16:44 job.xml
[2025-07-26 17:56:19] -rw-r--r-- 2 boinc boinc 147449203 Jul 26 16:44 EVNT.45743347._001781.pool.root.1
[2025-07-26 17:56:19] drwxrwx--x 2 boinc boinc      4096 Jul 26 16:44 shared
[2025-07-26 17:56:19] -rw-r--r-- 2 boinc boinc    542894 Jul 26 16:44 input.tar.gz
[2025-07-26 17:56:19] -rw-r--r-- 2 boinc boinc     15095 Jul 26 16:44 start_atlas.sh
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc         0 Jul 26 16:44 boinc_setup_complete
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc      6413 Jul 26 16:44 init_data.xml
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc         0 Jul 26 16:44 boinc_lockfile
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc      2563 Jul 26 16:44 pandaJob.out
[2025-07-26 17:56:19] -rw------- 1 boinc boinc    980133 Jul 26 16:45 agis_schedconf.cvmfs.json
[2025-07-26 17:56:19] -rw------- 1 boinc boinc   1593052 Jul 26 16:45 agis_ddmendpoints.agis.ALL.json
[2025-07-26 17:56:19] drwx------ 4 boinc boinc      4096 Jul 26 16:45 pilot3
[2025-07-26 17:56:19] -rw------- 1 boinc boinc 216427104 Jul 26 17:50 HITS.45743349._031763.pool.root.1
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc       528 Jul 26 17:50 boinc_task_state.xml
[2025-07-26 17:56:19] -rw------- 1 boinc boinc      1041 Jul 26 17:50 memory_monitor_summary.json
[2025-07-26 17:56:19] -rw------- 1 boinc boinc    348937 Jul 26 17:50 log.45743349._031763.job.log.tgz.1
[2025-07-26 17:56:19] -rw------- 1 boinc boinc      7796 Jul 26 17:50 heartbeat.json
[2025-07-26 17:56:19] -rw------- 1 boinc boinc       747 Jul 26 17:51 pilotlog.txt
[2025-07-26 17:56:19] -rw------- 1 boinc boinc        95 Jul 26 17:51 pilot_heartbeat.json
[2025-07-26 17:56:19] -rw------- 1 boinc boinc    392654 Jul 26 17:51 log.45743349._031763.job.log.1
[2025-07-26 17:56:19] -rw------- 1 boinc boinc       357 Jul 26 17:51 output.list
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc       620 Jul 26 17:51 runtime_log
[2025-07-26 17:56:19] -rw------- 1 boinc boinc    757760 Jul 26 17:51 result.tar.gz
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc      8746 Jul 26 17:51 runtime_log.err
[2025-07-26 17:56:19] -rw------- 1 boinc boinc       665 Jul 26 17:51 KRkNDmdClz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmB7zKDmQK9Wwm.diag
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc        26 Jul 26 17:56 wrapper_checkpoint.txt
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc      8192 Jul 26 17:56 boinc_mmap_file
[2025-07-26 17:56:19] -rw-r--r-- 1 boinc boinc     21589 Jul 26 17:56 stderr.txt
[2025-07-26 17:56:19] HITS file was successfully produced:
[2025-07-26 17:56:19] -rw------- 1 boinc boinc 216427104 Jul 26 17:50 shared/HITS.pool.root.1
[2025-07-26 17:56:19]  *** Contents of shared directory: ***
[2025-07-26 17:56:19] total 356648
[2025-07-26 17:56:19] -rw-r--r-- 2 boinc boinc 147449203 Jul 26 16:44 ATLAS.root_0
[2025-07-26 17:56:19] -rw-r--r-- 2 boinc boinc    542894 Jul 26 16:44 input.tar.gz
[2025-07-26 17:56:19] -rw-r--r-- 2 boinc boinc     15095 Jul 26 16:44 start_atlas.sh
[2025-07-26 17:56:19] -rw------- 1 boinc boinc 216427104 Jul 26 17:50 HITS.pool.root.1
[2025-07-26 17:56:19] -rw------- 1 boinc boinc    757760 Jul 26 17:51 result.tar.gz
17:56:21 (2247034): run_atlas exited; CPU time 39940.231850
17:56:21 (2247034): called boinc_finish(0)

</stderr_txt>
]]>

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