Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:53 (17018): wrapper (7.7.26015): starting
05:46:53 (17018): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 05:46:53] Arguments: --nthreads 12
[2025-07-26 05:46:53] Threads: 12
[2025-07-26 05:46:53] Checking for CVMFS
[2025-07-26 05:46:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 05:46:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 05:46:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 05:46:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 05:46:53] 2.11.2.0 3035 110354 97992 148772 0 57 14759646 20275201 1 130560 0 36430121 99.970 10079439 11080 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 05:46:53] CVMFS is ok
[2025-07-26 05:46:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 05:46:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 05:46:53] Further information can be found at the LHC@home message board.
[2025-07-26 05:46:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 05:46:53] Checking for apptainer binary...
[2025-07-26 05:46:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 05:46:53] Running /usr/bin/apptainer --version
[2025-07-26 05:46:53] apptainer version 1.3.2-1.el7
[2025-07-26 05:46:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 05:46:55] c-205-31.aglt2.org
[2025-07-26 05:46:55] apptainer works
[2025-07-26 05:46:55] Set ATHENA_PROC_NUMBER=12
[2025-07-26 05:46:55] Set ATHENA_CORE_NUMBER=12
[2025-07-26 05:46:55] Starting ATLAS job with PandaID=6745068590
[2025-07-26 05:46:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 07:08:13]  *** The last 200 lines of the pilot log: ***
[2025-07-26 07:08:13]  is_tar=False
[2025-07-26 07:08:13]  lfn=log.45743349._029801.job.log.tgz.1
[2025-07-26 07:08:13]  mtime=0
[2025-07-26 07:08:13]  protocol_id=None
[2025-07-26 07:08:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 07:08:13]  replicas=None
[2025-07-26 07:08:13]  scope=mc23_13p6TeV
[2025-07-26 07:08:13]  status=None
[2025-07-26 07:08:13]  status_code=0
[2025-07-26 07:08:13]  storage_token=
[2025-07-26 07:08:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745068590/log.45743349._029801.job.log.tgz.1
[2025-07-26 07:08:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/eb/log.45743349._029801.job.log.tgz.1
[2025-07-26 07:08:13]  workdir=None
[2025-07-26 07:08:13] ]
[2025-07-26 07:08:13] 2025-07-26 11:07:33,232 | INFO     | transferring file log.45743349._029801.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745068590/log.45743349._029801.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 07:08:13] 2025-07-26 11:07:33,233 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745068590/log.45743349._029801.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._029801.job
[2025-07-26 07:08:13] 2025-07-26 11:07:33,256 | INFO     | adding to output.list: log.45743349._029801.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8e/eb/log.45743349._029801.job.log.tg
[2025-07-26 07:08:13] 2025-07-26 11:07:33,257 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 07:08:13] 2025-07-26 11:07:33,257 | INFO     | summary of transferred files:
[2025-07-26 07:08:13] 2025-07-26 11:07:33,257 | INFO     |  -- lfn=log.45743349._029801.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 07:08:13] 2025-07-26 11:07:33,257 | INFO     | stage-out finished correctly
[2025-07-26 07:08:13] 2025-07-26 11:07:34,270 | INFO     | monitor loop #360: job 0:6745068590 is in state 'finished'
[2025-07-26 07:08:13] 2025-07-26 11:07:34,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:08:13] 2025-07-26 11:07:36,270 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 07:08:13] 2025-07-26 11:07:36,354 | INFO     | job 6745068590 has state=finished
[2025-07-26 07:08:13] 2025-07-26 11:07:36,354 | INFO     | preparing for final server update for job 6745068590 in state='finished'
[2025-07-26 07:08:13] 2025-07-26 11:07:36,355 | INFO     | this job has now completed (state=finished)
[2025-07-26 07:08:13] 2025-07-26 11:07:36,355 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 07:08:13] 2025-07-26 11:07:36,355 | INFO     | log transfer has been attempted: DONE
[2025-07-26 07:08:13] 2025-07-26 11:07:36,355 | INFO     | job 6745068590 has finished - writing final server update
[2025-07-26 07:08:13] 2025-07-26 11:07:36,355 | INFO     | total number of processed events: 400 (read)
[2025-07-26 07:08:13] 2025-07-26 11:07:36,358 | INFO     | executing command: lscpu
[2025-07-26 07:08:13] 2025-07-26 11:07:36,389 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 07:08:13] 2025-07-26 11:07:36,788 | INFO     | monitor loop #361: job 0:6745068590 is in state 'finished'
[2025-07-26 07:08:13] 2025-07-26 11:07:36,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:08:13] 2025-07-26 11:07:39,292 | INFO     | monitor loop #362: job 0:6745068590 is in state 'finished'
[2025-07-26 07:08:13] 2025-07-26 11:07:39,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,161 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 07:08:13] 2025-07-26 11:07:41,165 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-07-26 07:08:13] 2025-07-26 11:07:41,167 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745068590/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,167 | INFO     | extracted standard info from prmon json
[2025-07-26 07:08:13] 2025-07-26 11:07:41,167 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 07:08:13] 2025-07-26 11:07:41,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 07:08:13] 2025-07-26 11:07:41,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 07:08:13] 2025-07-26 11:07:41,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 07:08:13] 2025-07-26 11:07:41,169 | INFO     | fitting pss+swap vs Time
[2025-07-26 07:08:13] 2025-07-26 11:07:41,169 | INFO     | sum of square deviations: 115715658.0
[2025-07-26 07:08:13] 2025-07-26 11:07:41,170 | INFO     | sum of deviations: -6048046025.5
[2025-07-26 07:08:13] 2025-07-26 11:07:41,170 | INFO     | mean x: 1753525729.5
[2025-07-26 07:08:13] 2025-07-26 11:07:41,170 | INFO     | mean y: 2730410.5416666665
[2025-07-26 07:08:13] 2025-07-26 11:07:41,170 | INFO     | -- intersect: 91653285765.06822
[2025-07-26 07:08:13] 2025-07-26 11:07:41,170 | INFO     | intersect: 91653285765.06822
[2025-07-26 07:08:13] 2025-07-26 11:07:41,170 | INFO     | chi2: 0.058249319341721645
[2025-07-26 07:08:13] 2025-07-26 11:07:41,171 | INFO     | -- intersect: 91653285765.06822
[2025-07-26 07:08:13] 2025-07-26 11:07:41,171 | INFO     | current memory leak: -52.27 B/s (using 72 data points, chi2=0.06)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,171 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,171 | INFO     | ..............................
[2025-07-26 07:08:13] 2025-07-26 11:07:41,171 | INFO     | . Timing measurements:
[2025-07-26 07:08:13] 2025-07-26 11:07:41,171 | INFO     | . get job = 0 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | . initial setup = 2 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | . payload setup = 9 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | . stage-in = 0 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | . payload execution = 4794 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | . stage-out = 0 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | . log creation = 0 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,172 | INFO     | ..............................
[2025-07-26 07:08:13] 2025-07-26 11:07:41,663 | INFO     | 
[2025-07-26 07:08:13] 2025-07-26 11:07:41,664 | INFO     | job summary report
[2025-07-26 07:08:13] 2025-07-26 11:07:41,664 | INFO     | --------------------------------------------------
[2025-07-26 07:08:13] 2025-07-26 11:07:41,664 | INFO     | PanDA job id: 6745068590
[2025-07-26 07:08:13] 2025-07-26 11:07:41,664 | INFO     | task id: 45743349
[2025-07-26 07:08:13] 2025-07-26 11:07:41,664 | INFO     | errors: (none)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,664 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 07:08:13] 2025-07-26 11:07:41,665 | INFO     | pilot state: finished 
[2025-07-26 07:08:13] 2025-07-26 11:07:41,665 | INFO     | transexitcode: 0
[2025-07-26 07:08:13] 2025-07-26 11:07:41,665 | INFO     | exeerrorcode: 0
[2025-07-26 07:08:13] 2025-07-26 11:07:41,665 | INFO     | exeerrordiag: 
[2025-07-26 07:08:13] 2025-07-26 11:07:41,665 | INFO     | exitcode: 0
[2025-07-26 07:08:13] 2025-07-26 11:07:41,665 | INFO     | exitmsg: OK
[2025-07-26 07:08:13] 2025-07-26 11:07:41,666 | INFO     | cpuconsumptiontime: 52388 s
[2025-07-26 07:08:13] 2025-07-26 11:07:41,666 | INFO     | nevents: 400
[2025-07-26 07:08:13] 2025-07-26 11:07:41,666 | INFO     | neventsw: 0
[2025-07-26 07:08:13] 2025-07-26 11:07:41,666 | INFO     | pid: 27986
[2025-07-26 07:08:13] 2025-07-26 11:07:41,666 | INFO     | pgrp: 27986
[2025-07-26 07:08:13] 2025-07-26 11:07:41,666 | INFO     | corecount: 12
[2025-07-26 07:08:13] 2025-07-26 11:07:41,667 | INFO     | event service: False
[2025-07-26 07:08:13] 2025-07-26 11:07:41,667 | INFO     | sizes: {0: 2397475, 1: 2397475, 5: 2397765, 11: 2397821, 4807: 2424112, 4808: 2433293, 4811: 2433293, 4816: 2433487}
[2025-07-26 07:08:13] 2025-07-26 11:07:41,667 | INFO     | --------------------------------------------------
[2025-07-26 07:08:13] 2025-07-26 11:07:41,667 | INFO     | 
[2025-07-26 07:08:13] 2025-07-26 11:07:41,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 07:08:13] 2025-07-26 11:07:41,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 07:08:13] 2025-07-26 11:07:41,696 | INFO     | job 6745068590 has completed (purged errors)
[2025-07-26 07:08:13] 2025-07-26 11:07:41,696 | INFO     | overall cleanup function is called
[2025-07-26 07:08:13] 2025-07-26 11:07:42,703 | INFO     | --- collectZombieJob: --- 10, [27986]
[2025-07-26 07:08:13] 2025-07-26 11:07:42,703 | INFO     | zombie collector waiting for pid 27986
[2025-07-26 07:08:13] 2025-07-26 11:07:42,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 07:08:13] 2025-07-26 11:07:42,704 | INFO     | collected zombie processes
[2025-07-26 07:08:13] 2025-07-26 11:07:42,704 | INFO     | will attempt to kill all subprocesses of pid=27986
[2025-07-26 07:08:13] 2025-07-26 11:07:42,792 | INFO     | process IDs to be killed: [27986] (in reverse order)
[2025-07-26 07:08:13] 2025-07-26 11:07:42,842 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 07:08:13] 2025-07-26 11:07:42,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 07:08:13] 2025-07-26 11:07:42,845 | INFO     | did not find any defunct processes belonging to 27986
[2025-07-26 07:08:13] 2025-07-26 11:07:42,848 | INFO     | did not find any defunct processes belonging to 27986
[2025-07-26 07:08:13] 2025-07-26 11:07:42,848 | INFO     | ready for new job
[2025-07-26 07:08:13] 2025-07-26 11:07:42,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 07:08:13] 2025-07-26 11:07:42,849 | INFO     | ***************************************
[2025-07-26 07:08:13] 2025-07-26 11:07:42,849 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 07:08:13] 2025-07-26 11:07:42,849 | INFO     | ***************************************
[2025-07-26 07:08:13] 2025-07-26 11:07:42,849 | INFO     | 
[2025-07-26 07:08:13] 2025-07-26 11:07:42,850 | INFO     | architecture information:
[2025-07-26 07:08:13] 2025-07-26 11:07:42,850 | INFO     | executing command: cat /etc/os-release
[2025-07-26 07:08:13] 2025-07-26 11:07:42,865 | INFO     | cat /etc/os-release:
[2025-07-26 07:08:13] NAME="CentOS Linux"
[2025-07-26 07:08:13] VERSION="7 (Core)"
[2025-07-26 07:08:13] ID="centos"
[2025-07-26 07:08:13] ID_LIKE="rhel fedora"
[2025-07-26 07:08:13] VERSION_ID="7"
[2025-07-26 07:08:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 07:08:13] ANSI_COLOR="0;31"
[2025-07-26 07:08:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 07:08:13] HOME_URL="https://www.centos.org/"
[2025-07-26 07:08:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 07:08:13] 
[2025-07-26 07:08:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 07:08:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 07:08:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 07:08:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 07:08:13] 
[2025-07-26 07:08:13] 2025-07-26 11:07:42,865 | INFO     | ***************************************
[2025-07-26 07:08:13] 2025-07-26 11:07:43,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 07:08:13] 2025-07-26 11:07:43,387 | INFO     | sufficient remaining disk space (29516365824 B)
[2025-07-26 07:08:13] 2025-07-26 11:07:43,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 07:08:13] 2025-07-26 11:07:43,388 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 07:08:13] 2025-07-26 11:07:43,388 | INFO     | update_server=False
[2025-07-26 07:08:13] 2025-07-26 11:07:43,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 07:08:13] 2025-07-26 11:07:43,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:08:13] 2025-07-26 11:07:43,389 | INFO     | aborting loop
[2025-07-26 07:08:13] 2025-07-26 11:07:43,574 | INFO     | all job control threads have been joined
[2025-07-26 07:08:13] 2025-07-26 11:07:43,833 | INFO     | all data control threads have been joined
[2025-07-26 07:08:13] 2025-07-26 11:07:43,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 07:08:13] 2025-07-26 11:07:43,865 | INFO     | all payload control threads have been joined
[2025-07-26 07:08:13] 2025-07-26 11:07:44,391 | INFO     | [job] retrieve thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,394 | INFO     | [job] job monitor thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,579 | INFO     | [job] control thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,656 | INFO     | [job] validate thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,663 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,683 | INFO     | [payload] validate_post thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,739 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,836 | INFO     | [data] control thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,871 | INFO     | [payload] control thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:44,871 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:45,016 | INFO     | [data] copytool_in thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:45,727 | INFO     | [payload] failed_post thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:45,866 | INFO     | [data] copytool_out thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:46,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:08:13] 2025-07-26 11:07:46,863 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 07:08:13] 2025-07-26 11:07:47,272 | INFO     | [job] queue monitor thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:50,869 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:53,467 | INFO     | job.realtimelogging is not enabled
[2025-07-26 07:08:13] 2025-07-26 11:07:54,472 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 07:08:13] 2025-07-26 11:07:55,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140162122925888)>', '<ExcThread(monitor, started 140160872208128)>']
[2025-07-26 07:08:13] 2025-07-26 11:08:00,806 | INFO     | all workflow threads have been joined
[2025-07-26 07:08:13] 2025-07-26 11:08:00,806 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 07:08:13] 2025-07-26 11:08:00,806 | INFO     | traces error code: 0
[2025-07-26 07:08:13] 2025-07-26 11:08:00,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 07:08:13] 2025-07-26 11:08:13,524 | INFO     | PID=20667 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 07:08:13] 2025-07-26 11:08:13,525 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 07:08:13] 2025-07-26 11:08:13,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 07:08:13] 2025-07-26 11:08:13,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 07:08:13] 2025-07-26 11:08:13,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 07:08:13] 2025-07-26 11:08:13,525 | INFO     | [monitor] control thread has ended
[2025-07-26 07:08:13] 2025-07-26 11:08:13,622 [wrapper] ==== pilot stdout END ====
[2025-07-26 07:08:13] 2025-07-26 11:08:13,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 07:08:13] 2025-07-26 11:08:13,630 [wrapper] pilotpid: 20667
[2025-07-26 07:08:13] 2025-07-26 11:08:13,633 [wrapper] Pilot exit status: 0
[2025-07-26 07:08:13] 2025-07-26 11:08:13,650 [wrapper] pandaids: 6745068590
[2025-07-26 07:08:13] 2025-07-26 11:08:13,690 [wrapper] cleanup supervisor_pilot 10777 20668
[2025-07-26 07:08:13] 2025-07-26 11:08:13,693 [wrapper] Test setup, not cleaning
[2025-07-26 07:08:13] 2025-07-26 11:08:13,697 [wrapper] apfmon messages muted
[2025-07-26 07:08:13] 2025-07-26 11:08:13,701 [wrapper] ==== wrapper stdout END ====
[2025-07-26 07:08:13] 2025-07-26 11:08:13,705 [wrapper] ==== wrapper stderr END ====
[2025-07-26 07:08:13]  *** Error codes and diagnostics ***
[2025-07-26 07:08:13]     "exeErrorCode": 0,
[2025-07-26 07:08:13]     "exeErrorDiag": "",
[2025-07-26 07:08:13]     "pilotErrorCode": 0,
[2025-07-26 07:08:13]     "pilotErrorDiag": "",
[2025-07-26 07:08:13]  *** Listing of results directory ***
[2025-07-26 07:08:13] total 351844
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas    550332 Jun 18 11:33 pilot3.tar.gz
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 20:55 queuedata.json
[2025-07-26 07:08:13] -rwx------ 1 boincer umatlas     36292 Jul 25 20:55 runpilot2-wrapper.sh
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas       100 Jul 26 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 07:08:13] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 05:46 run_atlas
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas       105 Jul 26 05:46 job.xml
[2025-07-26 07:08:13] -rw-r--r-- 2 boincer umatlas 145292157 Jul 26 05:46 EVNT.45743347._001667.pool.root.1
[2025-07-26 07:08:13] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 05:46 start_atlas.sh
[2025-07-26 07:08:13] drwxrwx--x 2 boincer umatlas      4096 Jul 26 05:46 shared
[2025-07-26 07:08:13] -rw-r--r-- 2 boincer umatlas    564563 Jul 26 05:46 input.tar.gz
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas         0 Jul 26 05:46 boinc_lockfile
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 05:46 pandaJob.out
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas    980133 Jul 26 05:47 agis_schedconf.cvmfs.json
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas   1593052 Jul 26 05:47 agis_ddmendpoints.agis.ALL.json
[2025-07-26 07:08:13] drwx------ 6 boincer umatlas      4096 Jul 26 05:47 pilot3
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 07:02 init_data.xml
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas 209441811 Jul 26 07:07 HITS.45743349._029801.pool.root.1
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas       529 Jul 26 07:07 boinc_task_state.xml
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas      1049 Jul 26 07:07 memory_monitor_summary.json
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas    354000 Jul 26 07:07 log.45743349._029801.job.log.tgz.1
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas      7855 Jul 26 07:07 heartbeat.json
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas        27 Jul 26 07:07 wrapper_checkpoint.txt
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 07:07 boinc_mmap_file
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas       745 Jul 26 07:08 pilotlog.txt
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas        95 Jul 26 07:08 pilot_heartbeat.json
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas    464066 Jul 26 07:08 log.45743349._029801.job.log.1
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas       357 Jul 26 07:08 output.list
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas       620 Jul 26 07:08 runtime_log
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas    839680 Jul 26 07:08 result.tar.gz
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 07:08 runtime_log.err
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas       659 Jul 26 07:08 53ONDmmNiz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsqzKDmqyYmZm.diag
[2025-07-26 07:08:13] -rw-r--r-- 1 boincer umatlas     21573 Jul 26 07:08 stderr.txt
[2025-07-26 07:08:13] HITS file was successfully produced:
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas 209441811 Jul 26 07:07 shared/HITS.pool.root.1
[2025-07-26 07:08:13]  *** Contents of shared directory: ***
[2025-07-26 07:08:13] total 347816
[2025-07-26 07:08:13] -rw-r--r-- 2 boincer umatlas 145292157 Jul 26 05:46 ATLAS.root_0
[2025-07-26 07:08:13] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 05:46 start_atlas.sh
[2025-07-26 07:08:13] -rw-r--r-- 2 boincer umatlas    564563 Jul 26 05:46 input.tar.gz
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas 209441811 Jul 26 07:07 HITS.pool.root.1
[2025-07-26 07:08:13] -rw------- 1 boincer umatlas    839680 Jul 26 07:08 result.tar.gz
07:08:15 (17018): run_atlas exited; CPU time 52361.756280
07:08:15 (17018): called boinc_finish(0)

</stderr_txt>
]]>

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