Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:01:13 (1861807): wrapper (7.7.26015): starting
12:01:13 (1861807): wrapper: running run_atlas (--nthreads 12)
[2025-07-30 12:01:13] Arguments: --nthreads 12
[2025-07-30 12:01:13] Threads: 12
[2025-07-30 12:01:13] Checking for CVMFS
[2025-07-30 12:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-30 12:01:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-30 12:01:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-30 12:01:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-30 12:01:17] 2.13.0.0 1164766 11954 96000 148922 0 188 2378669 4096000 13964 130560 0 130461677 99.999 435941 210 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-30 12:01:17] CVMFS is ok
[2025-07-30 12:01:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-30 12:01:18] Checking for apptainer binary...
[2025-07-30 12:01:18] apptainer is not installed, using version from CVMFS
[2025-07-30 12:01:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-30 12:01:59] epyc7v12
[2025-07-30 12:01:59] apptainer works
[2025-07-30 12:01:59] Set ATHENA_PROC_NUMBER=12
[2025-07-30 12:01:59] Set ATHENA_CORE_NUMBER=12
[2025-07-30 12:01:59] Starting ATLAS job with PandaID=6745094867
[2025-07-30 12:01:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31434/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-30 14:45:07]  *** The last 200 lines of the pilot log: ***
[2025-07-30 14:45:07] 2025-07-30 14:44:28,247 | INFO     | -- intersect: -221470396969.8468
[2025-07-30 14:45:07] 2025-07-30 14:44:28,247 | INFO     | intersect: -221470396969.8468
[2025-07-30 14:45:07] 2025-07-30 14:44:28,247 | INFO     | chi2: 13.2142417238106
[2025-07-30 14:45:07] 2025-07-30 14:44:28,248 | INFO     | sum of square deviations: 797327475.357661
[2025-07-30 14:45:07] 2025-07-30 14:44:28,248 | INFO     | sum of deviations: 127752275956.59117
[2025-07-30 14:45:07] 2025-07-30 14:44:28,248 | INFO     | mean x: 1753882053.109489
[2025-07-30 14:45:07] 2025-07-30 14:44:28,249 | INFO     | mean y: 2421269.1605839417
[2025-07-30 14:45:07] 2025-07-30 14:44:28,249 | INFO     | -- intersect: -281014389224.7301
[2025-07-30 14:45:07] 2025-07-30 14:44:28,249 | INFO     | intersect: -281014389224.7301
[2025-07-30 14:45:07] 2025-07-30 14:44:28,249 | INFO     | chi2: 11.681884466937221
[2025-07-30 14:45:07] 2025-07-30 14:44:28,249 | INFO     | current chi2=11.681884466937221 (change=11.59625568308048 %)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,249 | INFO     | right removable region: 136
[2025-07-30 14:45:07] 2025-07-30 14:44:28,250 | INFO     | sum of square deviations: 797326134.1313862
[2025-07-30 14:45:07] 2025-07-30 14:44:28,250 | INFO     | sum of deviations: 61174987765.73723
[2025-07-30 14:45:07] 2025-07-30 14:44:28,255 | INFO     | mean x: 1753882358.1167884
[2025-07-30 14:45:07] 2025-07-30 14:44:28,255 | INFO     | mean y: 2481479.7664233577
[2025-07-30 14:45:07] 2025-07-30 14:44:28,255 | INFO     | -- intersect: -134564450679.33507
[2025-07-30 14:45:07] 2025-07-30 14:44:28,255 | INFO     | intersect: -134564450679.33507
[2025-07-30 14:45:07] 2025-07-30 14:44:28,255 | INFO     | chi2: 7.156828150148376
[2025-07-30 14:45:07] 2025-07-30 14:44:28,255 | INFO     | current chi2=7.156828150148376 (change=45.84003910528922 %)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,256 | INFO     | sum of square deviations: 713170839.060607
[2025-07-30 14:45:07] 2025-07-30 14:44:28,256 | INFO     | sum of deviations: 18409545487.954536
[2025-07-30 14:45:07] 2025-07-30 14:44:28,256 | INFO     | mean x: 1753882510.621212
[2025-07-30 14:45:07] 2025-07-30 14:44:28,256 | INFO     | mean y: 2558868.659090909
[2025-07-30 14:45:07] 2025-07-30 14:44:28,257 | INFO     | -- intersect: -45271557922.682655
[2025-07-30 14:45:07] 2025-07-30 14:44:28,257 | INFO     | intersect: -45271557922.682655
[2025-07-30 14:45:07] 2025-07-30 14:44:28,257 | INFO     | chi2: 3.4004211557567623
[2025-07-30 14:45:07] 2025-07-30 14:44:28,257 | INFO     | current chi2=3.4004211557567623 (change=52.48703637397995 %)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,257 | INFO     | sum of square deviations: 635155193.9842503
[2025-07-30 14:45:07] 2025-07-30 14:44:28,258 | INFO     | sum of deviations: -7531487044.015747
[2025-07-30 14:45:07] 2025-07-30 14:44:28,258 | INFO     | mean x: 1753882663.1259842
[2025-07-30 14:45:07] 2025-07-30 14:44:28,258 | INFO     | mean y: 2609277.125984252
[2025-07-30 14:45:07] 2025-07-30 14:44:28,258 | INFO     | -- intersect: 20799643890.346405
[2025-07-30 14:45:07] 2025-07-30 14:44:28,263 | INFO     | intersect: 20799643890.346405
[2025-07-30 14:45:07] 2025-07-30 14:44:28,263 | INFO     | chi2: 2.0154232650525366
[2025-07-30 14:45:07] 2025-07-30 14:44:28,263 | INFO     | current chi2=2.0154232650525366 (change=40.73018685816272 %)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,263 | INFO     | sum of square deviations: 563046636.401639
[2025-07-30 14:45:07] 2025-07-30 14:44:28,264 | INFO     | sum of deviations: -17336676218.885246
[2025-07-30 14:45:07] 2025-07-30 14:44:28,264 | INFO     | mean x: 1753882815.6311476
[2025-07-30 14:45:07] 2025-07-30 14:44:28,264 | INFO     | mean y: 2629926.180327869
[2025-07-30 14:45:07] 2025-07-30 14:44:28,264 | INFO     | -- intersect: 54006146748.14052
[2025-07-30 14:45:07] 2025-07-30 14:44:28,264 | INFO     | intersect: 54006146748.14052
[2025-07-30 14:45:07] 2025-07-30 14:44:28,265 | INFO     | chi2: 1.8097239824513038
[2025-07-30 14:45:07] 2025-07-30 14:44:28,265 | INFO     | current chi2=1.8097239824513038 (change=10.20625722487483 %)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,265 | INFO     | left removable region: 40
[2025-07-30 14:45:07] 2025-07-30 14:44:28,265 | INFO     | sum of square deviations: 274325856.23958343
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | sum of deviations: -972283933.6666665
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | mean x: 1753883242.6354167
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | mean y: 2672890.6666666665
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | -- intersect: 6218902456.910345
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | intersect: 6218902456.910345
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | chi2: 0.002981116601797078
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | -- intersect: 6218902456.910345
[2025-07-30 14:45:07] 2025-07-30 14:44:28,266 | INFO     | current memory leak: -3.54 B/s (using 96 data points, chi2=0.00)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,271 | INFO     | could have reported an average CPU frequency of 2397 MHz (8 samples)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,271 | INFO     | ..............................
[2025-07-30 14:45:07] 2025-07-30 14:44:28,271 | INFO     | . Timing measurements:
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . get job = 0 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . initial setup = 10 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . payload setup = 239 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . stage-in = 0 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . payload execution = 8784 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . stage-out = 4 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | . log creation = 2 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,272 | INFO     | ..............................
[2025-07-30 14:45:07] 2025-07-30 14:44:28,531 | INFO     | 
[2025-07-30 14:45:07] 2025-07-30 14:44:28,531 | INFO     | job summary report
[2025-07-30 14:45:07] 2025-07-30 14:44:28,531 | INFO     | --------------------------------------------------
[2025-07-30 14:45:07] 2025-07-30 14:44:28,531 | INFO     | PanDA job id: 6745094867
[2025-07-30 14:45:07] 2025-07-30 14:44:28,531 | INFO     | task id: 45743349
[2025-07-30 14:45:07] 2025-07-30 14:44:28,531 | INFO     | errors: (none)
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | pilot state: finished 
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | transexitcode: 0
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | exeerrorcode: 0
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | exeerrordiag: 
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | exitcode: 0
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | exitmsg: OK
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | cpuconsumptiontime: 52944 s
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | nevents: 400
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | neventsw: 0
[2025-07-30 14:45:07] 2025-07-30 14:44:28,532 | INFO     | pid: 1938284
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | pgrp: 1938284
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | corecount: 12
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | event service: False
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | sizes: {0: 2391761, 1: 2391960, 2: 2391960, 13: 2391988, 23: 2392044, 34: 2392072, 45: 2392228, 56: 2392256, 67: 2392284, 77: 2392312, 88: 2392368, 99: 2392676, 11
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | --------------------------------------------------
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | 
[2025-07-30 14:45:07] 2025-07-30 14:44:28,533 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31434/slots/0
[2025-07-30 14:45:07] 2025-07-30 14:44:29,568 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,569 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,570 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-30 14:45:07] 2025-07-30 14:44:29,571 | INFO     | job 6745094867 has completed (purged errors)
[2025-07-30 14:45:07] 2025-07-30 14:44:29,571 | INFO     | overall cleanup function is called
[2025-07-30 14:45:07] 2025-07-30 14:44:30,583 | INFO     | --- collectZombieJob: --- 10, [1938284]
[2025-07-30 14:45:07] 2025-07-30 14:44:30,583 | INFO     | zombie collector waiting for pid 1938284
[2025-07-30 14:45:07] 2025-07-30 14:44:30,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-30 14:45:07] 2025-07-30 14:44:30,583 | INFO     | collected zombie processes
[2025-07-30 14:45:07] 2025-07-30 14:44:30,584 | INFO     | will attempt to kill all subprocesses of pid=1938284
[2025-07-30 14:45:07] 2025-07-30 14:44:31,848 | INFO     | process IDs to be killed: [1938284] (in reverse order)
[2025-07-30 14:45:07] 2025-07-30 14:44:42,373 | WARNING  | found no corresponding commands to process id(s)
[2025-07-30 14:45:07] 2025-07-30 14:44:42,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-30 14:45:07] 2025-07-30 14:44:42,429 | INFO     | did not find any defunct processes belonging to 1938284
[2025-07-30 14:45:07] 2025-07-30 14:44:42,492 | INFO     | did not find any defunct processes belonging to 1938284
[2025-07-30 14:45:07] 2025-07-30 14:44:42,492 | INFO     | ready for new job
[2025-07-30 14:45:07] 2025-07-30 14:44:42,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-30 14:45:07] 2025-07-30 14:44:42,503 | INFO     | ***************************************
[2025-07-30 14:45:07] 2025-07-30 14:44:42,504 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-30 14:45:07] 2025-07-30 14:44:42,504 | INFO     | ***************************************
[2025-07-30 14:45:07] 2025-07-30 14:44:42,504 | INFO     | 
[2025-07-30 14:45:07] 2025-07-30 14:44:42,544 | INFO     | architecture information:
[2025-07-30 14:45:07] 2025-07-30 14:44:42,555 | INFO     | executing command: cat /etc/os-release
[2025-07-30 14:45:07] 2025-07-30 14:44:42,996 | INFO     | cat /etc/os-release:
[2025-07-30 14:45:07] NAME="CentOS Linux"
[2025-07-30 14:45:07] VERSION="7 (Core)"
[2025-07-30 14:45:07] ID="centos"
[2025-07-30 14:45:07] ID_LIKE="rhel fedora"
[2025-07-30 14:45:07] VERSION_ID="7"
[2025-07-30 14:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-30 14:45:07] ANSI_COLOR="0;31"
[2025-07-30 14:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-30 14:45:07] HOME_URL="https://www.centos.org/"
[2025-07-30 14:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-30 14:45:07] 
[2025-07-30 14:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-30 14:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-30 14:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-30 14:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-30 14:45:07] 
[2025-07-30 14:45:07] 2025-07-30 14:44:42,996 | INFO     | ***************************************
[2025-07-30 14:45:07] 2025-07-30 14:44:43,499 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31434/slots/0
[2025-07-30 14:45:07] 2025-07-30 14:44:43,961 | INFO     | sufficient remaining disk space (205582761984 B)
[2025-07-30 14:45:07] 2025-07-30 14:44:43,961 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-30 14:45:07] 2025-07-30 14:44:43,961 | INFO     | current server update state: UPDATING_FINAL
[2025-07-30 14:45:07] 2025-07-30 14:44:43,962 | INFO     | update_server=False
[2025-07-30 14:45:07] 2025-07-30 14:44:43,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-30 14:45:07] 2025-07-30 14:44:43,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-30 14:45:07] 2025-07-30 14:44:43,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-30 14:45:07] 2025-07-30 14:44:43,963 | INFO     | aborting loop
[2025-07-30 14:45:07] 2025-07-30 14:44:44,907 | INFO     | all data control threads have been joined
[2025-07-30 14:45:07] 2025-07-30 14:44:44,967 | INFO     | [job] job monitor thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:44,971 | INFO     | [job] retrieve thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-30 14:45:07] 2025-07-30 14:44:45,043 | INFO     | all job control threads have been joined
[2025-07-30 14:45:07] 2025-07-30 14:44:45,075 | INFO     | [payload] validate_post thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,127 | INFO     | [payload] failed_post thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,247 | INFO     | [data] copytool_in thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,415 | INFO     | all payload control threads have been joined
[2025-07-30 14:45:07] 2025-07-30 14:44:45,551 | INFO     | [job] create_data_payload thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-30 14:45:07] 2025-07-30 14:44:45,643 | INFO     | [payload] execute_payloads thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,731 | INFO     | [payload] validate_pre thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,911 | INFO     | [data] control thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:45,971 | INFO     | [data] copytool_out thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:46,047 | INFO     | [job] control thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:46,295 | INFO     | [job] validate thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:46,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:46,419 | INFO     | [payload] control thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:46,611 | INFO     | [job] queue monitor thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:49,039 | INFO     | [data] queue_monitor thread has finished
[2025-07-30 14:45:07] 2025-07-30 14:44:50,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093603854144)>', '<ExcThread(monitor, started 140093150971648)>']
[2025-07-30 14:45:07] 2025-07-30 14:44:55,415 | INFO     | all workflow threads have been joined
[2025-07-30 14:45:07] 2025-07-30 14:44:55,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-30 14:45:07] 2025-07-30 14:44:55,415 | INFO     | traces error code: 0
[2025-07-30 14:45:07] 2025-07-30 14:44:55,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-30 14:45:07] 2025-07-30 14:45:03,018 | INFO     | PID=1881897 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-30 14:45:07] 2025-07-30 14:45:03,018 | INFO     | .. there are 19 such processes running
[2025-07-30 14:45:07] 2025-07-30 14:45:03,019 | INFO     | found 0 job(s) in 20 queues
[2025-07-30 14:45:07] 2025-07-30 14:45:03,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-30 14:45:07] 2025-07-30 14:45:03,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-30 14:45:07] 2025-07-30 14:45:03,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-30 14:45:07] 2025-07-30 14:45:03,020 | CRITICAL | thread 'MainThread' is not alive
[2025-07-30 14:45:07] 2025-07-30 14:45:03,020 | INFO     | [monitor] control thread has ended
[2025-07-30 14:45:07] 2025-07-30 14:45:03,335 [wrapper] ==== pilot stdout END ====
[2025-07-30 14:45:07] 2025-07-30 14:45:03,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-30 14:45:07] 2025-07-30 14:45:03,560 [wrapper] pilotpid: 1881897
[2025-07-30 14:45:07] 2025-07-30 14:45:03,647 [wrapper] Pilot exit status: 0
[2025-07-30 14:45:07] 2025-07-30 14:45:04,227 [wrapper] pandaids: 6745094867
[2025-07-30 14:45:07] 2025-07-30 14:45:04,735 [wrapper] cleanup supervisor_pilot 2413798 1881898
[2025-07-30 14:45:07] 2025-07-30 14:45:04,811 [wrapper] Test setup, not cleaning
[2025-07-30 14:45:07] 2025-07-30 14:45:04,907 [wrapper] apfmon messages muted
[2025-07-30 14:45:07] 2025-07-30 14:45:05,011 [wrapper] ==== wrapper stdout END ====
[2025-07-30 14:45:07] 2025-07-30 14:45:05,127 [wrapper] ==== wrapper stderr END ====
[2025-07-30 14:45:07]  *** Error codes and diagnostics ***
[2025-07-30 14:45:07]     "exeErrorCode": 0,
[2025-07-30 14:45:07]     "exeErrorDiag": "",
[2025-07-30 14:45:07]     "pilotErrorCode": 0,
[2025-07-30 14:45:07]     "pilotErrorDiag": "",
[2025-07-30 14:45:07]  *** Listing of results directory ***
[2025-07-30 14:45:07] total 345212
[2025-07-30 14:45:07] -rw-r--r-- 1 boinc boinc    530466 Jul 26 03:10 pilot3.tar.gz
[2025-07-30 14:45:07] -rw-r--r-- 1 boinc boinc      5112 Jul 26 03:17 queuedata.json
[2025-07-30 14:45:07] -rwx------ 1 boinc boinc     36292 Jul 26 03:18 runpilot2-wrapper.sh
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc       100 Jul 30 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-30 14:45:07] -rwxr-xr-x 1 boinc boinc      7986 Jul 30 12:01 run_atlas
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc       105 Jul 30 12:01 job.xml
[2025-07-30 14:45:07] -rw-r--r-- 2 boinc boinc     15095 Jul 30 12:01 start_atlas.sh
[2025-07-30 14:45:07] drwxrwx--x 2 boinc boinc      4096 Jul 30 12:01 shared
[2025-07-30 14:45:07] -rw-r--r-- 2 boinc boinc    542891 Jul 30 12:01 input.tar.gz
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc      6568 Jul 30 12:01 init_data.xml
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc         0 Jul 30 12:01 boinc_setup_complete
[2025-07-30 14:45:07] -rw-r--r-- 2 boinc boinc 144482919 Jul 30 12:01 EVNT.45743347._001756.pool.root.1
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc         0 Jul 30 12:01 boinc_lockfile
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc      2563 Jul 30 12:01 pandaJob.out
[2025-07-30 14:45:07] -rw------- 1 boinc boinc    977390 Jul 30 12:06 agis_schedconf.cvmfs.json
[2025-07-30 14:45:07] -rw------- 1 boinc boinc   1589827 Jul 30 12:06 agis_ddmendpoints.agis.ALL.json
[2025-07-30 14:45:07] drwx------ 4 boinc boinc      4096 Jul 30 12:06 pilot3
[2025-07-30 14:45:07] -rw------- 1 boinc boinc 202778616 Jul 30 14:40 HITS.45743349._031384.pool.root.1
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc       530 Jul 30 14:40 boinc_task_state.xml
[2025-07-30 14:45:07] -rw------- 1 boinc boinc      1022 Jul 30 14:41 memory_monitor_summary.json
[2025-07-30 14:45:07] -rw------- 1 boinc boinc    392419 Jul 30 14:41 log.45743349._031384.job.log.tgz.1
[2025-07-30 14:45:07] -rw------- 1 boinc boinc      7737 Jul 30 14:44 heartbeat.json
[2025-07-30 14:45:07] -rw------- 1 boinc boinc       893 Jul 30 14:45 pilotlog.txt
[2025-07-30 14:45:07] -rw------- 1 boinc boinc        95 Jul 30 14:45 pilot_heartbeat.json
[2025-07-30 14:45:07] -rw------- 1 boinc boinc    786548 Jul 30 14:45 log.45743349._031384.job.log.1
[2025-07-30 14:45:07] -rw------- 1 boinc boinc       357 Jul 30 14:45 output.list
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc       620 Jul 30 14:45 runtime_log
[2025-07-30 14:45:07] -rw------- 1 boinc boinc   1198080 Jul 30 14:45 result.tar.gz
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc        27 Jul 30 14:45 wrapper_checkpoint.txt
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc      8192 Jul 30 14:45 boinc_mmap_file
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc      8964 Jul 30 14:45 runtime_log.err
[2025-07-30 14:45:07] -rw------- 1 boinc boinc       652 Jul 30 14:45 NxCNDmpbkz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR7QLDmQrTGAo.diag
[2025-07-30 14:45:07] -rw-rw-r-- 1 boinc boinc     20793 Jul 30 14:45 stderr.txt
[2025-07-30 14:45:07] HITS file was successfully produced:
[2025-07-30 14:45:07] -rw------- 1 boinc boinc 202778616 Jul 30 14:40 shared/HITS.pool.root.1
[2025-07-30 14:45:07]  *** Contents of shared directory: ***
[2025-07-30 14:45:07] total 340856
[2025-07-30 14:45:07] -rw-r--r-- 2 boinc boinc     15095 Jul 30 12:01 start_atlas.sh
[2025-07-30 14:45:07] -rw-r--r-- 2 boinc boinc    542891 Jul 30 12:01 input.tar.gz
[2025-07-30 14:45:07] -rw-r--r-- 2 boinc boinc 144482919 Jul 30 12:01 ATLAS.root_0
[2025-07-30 14:45:07] -rw------- 1 boinc boinc 202778616 Jul 30 14:40 HITS.pool.root.1
[2025-07-30 14:45:07] -rw------- 1 boinc boinc   1198080 Jul 30 14:45 result.tar.gz
14:45:09 (1861807): run_atlas exited; CPU time 53433.062905
14:45:09 (1861807): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN