Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:03:03 (3173360): wrapper (7.7.26015): starting
06:03:03 (3173360): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 06:03:03] Arguments: --nthreads 12
[2025-07-26 06:03:03] Threads: 12
[2025-07-26 06:03:03] Checking for CVMFS
[2025-07-26 06:03:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:03:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:03:03] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:03:04] 2.12.6.0 18753 16797 310504 148772 1 401 17795205 32935937 9729 16776704 0 30311117 99.637 68346094 27659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 06:03:04] CVMFS is ok
[2025-07-26 06:03:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:03:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:03:04] Further information can be found at the LHC@home message board.
[2025-07-26 06:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:03:04] Checking for apptainer binary...
[2025-07-26 06:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:03:04] Running /usr/bin/apptainer --version
[2025-07-26 06:03:04] apptainer version 1.4.1-1.el9
[2025-07-26 06:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:03:04] c6-1-24-4.aglt2.org
[2025-07-26 06:03:04] apptainer works
[2025-07-26 06:03:04] Set ATHENA_PROC_NUMBER=12
[2025-07-26 06:03:04] Set ATHENA_CORE_NUMBER=12
[2025-07-26 06:03:04] Starting ATLAS job with PandaID=6745066345
[2025-07-26 06:03:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 07:30:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 07:30:29]  is_altstaged=None
[2025-07-26 07:30:29]  is_tar=False
[2025-07-26 07:30:29]  lfn=log.45743349._029015.job.log.tgz.1
[2025-07-26 07:30:29]  mtime=0
[2025-07-26 07:30:29]  protocol_id=None
[2025-07-26 07:30:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 07:30:29]  replicas=None
[2025-07-26 07:30:29]  scope=mc23_13p6TeV
[2025-07-26 07:30:29]  status=None
[2025-07-26 07:30:29]  status_code=0
[2025-07-26 07:30:29]  storage_token=
[2025-07-26 07:30:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745066345/log.45743349._029015.job.log.tgz.1
[2025-07-26 07:30:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/27/log.45743349._029015.job.log.tgz.1
[2025-07-26 07:30:29]  workdir=None
[2025-07-26 07:30:29] ]
[2025-07-26 07:30:29] 2025-07-26 11:29:51,027 | INFO     | transferring file log.45743349._029015.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745066345/log.45743349._029015.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 07:30:29] 2025-07-26 11:29:51,027 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745066345/log.45743349._029015.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._029015.job
[2025-07-26 07:30:29] 2025-07-26 11:29:51,049 | INFO     | adding to output.list: log.45743349._029015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/27/log.45743349._029015.job.log.tg
[2025-07-26 07:30:29] 2025-07-26 11:29:51,050 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 07:30:29] 2025-07-26 11:29:51,050 | INFO     | summary of transferred files:
[2025-07-26 07:30:29] 2025-07-26 11:29:51,050 | INFO     |  -- lfn=log.45743349._029015.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 07:30:29] 2025-07-26 11:29:51,051 | INFO     | stage-out finished correctly
[2025-07-26 07:30:29] 2025-07-26 11:29:51,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 07:30:29] 2025-07-26 11:29:51,232 | INFO     | job 6745066345 has state=finished
[2025-07-26 07:30:29] 2025-07-26 11:29:51,233 | INFO     | preparing for final server update for job 6745066345 in state='finished'
[2025-07-26 07:30:29] 2025-07-26 11:29:51,233 | INFO     | this job has now completed (state=finished)
[2025-07-26 07:30:29] 2025-07-26 11:29:51,233 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 07:30:29] 2025-07-26 11:29:51,234 | INFO     | log transfer has been attempted: DONE
[2025-07-26 07:30:29] 2025-07-26 11:29:51,234 | INFO     | job 6745066345 has finished - writing final server update
[2025-07-26 07:30:29] 2025-07-26 11:29:51,234 | INFO     | total number of processed events: 400 (read)
[2025-07-26 07:30:29] 2025-07-26 11:29:51,235 | INFO     | executing command: lscpu
[2025-07-26 07:30:29] 2025-07-26 11:29:51,294 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 07:30:29] 2025-07-26 11:29:52,873 | INFO     | monitor loop #380: job 0:6745066345 is in state 'finished'
[2025-07-26 07:30:29] 2025-07-26 11:29:52,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:30:29] 2025-07-26 11:29:55,378 | INFO     | monitor loop #381: job 0:6745066345 is in state 'finished'
[2025-07-26 07:30:29] 2025-07-26 11:29:55,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,768 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 07:30:29] 2025-07-26 11:29:56,785 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2565.971392857143
[2025-07-26 07:30:29] 2025-07-26 11:29:56,795 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745066345/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,796 | INFO     | extracted standard info from prmon json
[2025-07-26 07:30:29] 2025-07-26 11:29:56,796 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 07:30:29] 2025-07-26 11:29:56,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 07:30:29] 2025-07-26 11:29:56,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 07:30:29] 2025-07-26 11:29:56,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 07:30:29] 2025-07-26 11:29:56,800 | INFO     | fitting pss+swap vs Time
[2025-07-26 07:30:29] 2025-07-26 11:29:56,800 | INFO     | sum of square deviations: 147126479.5
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | sum of deviations: 1247339010.5000002
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | mean x: 1753526884.5
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | mean y: 2354419.012820513
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | -- intersect: -14864055056.906013
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | intersect: -14864055056.906013
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | chi2: 0.10040533812637346
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | -- intersect: -14864055056.906013
[2025-07-26 07:30:29] 2025-07-26 11:29:56,801 | INFO     | current memory leak: 8.48 B/s (using 78 data points, chi2=0.10)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | could have reported an average CPU frequency of 2597 MHz (6 samples)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | ..............................
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | . Timing measurements:
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | . get job = 0 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | . initial setup = 3 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | . payload setup = 9 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | . stage-in = 0 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,802 | INFO     | . payload execution = 5162 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,803 | INFO     | . stage-out = 0 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,803 | INFO     | . log creation = 0 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,803 | INFO     | ..............................
[2025-07-26 07:30:29] 2025-07-26 11:29:56,894 | INFO     | 
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | job summary report
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | --------------------------------------------------
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | PanDA job id: 6745066345
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | task id: 45743349
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | errors: (none)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | pilot state: finished 
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | transexitcode: 0
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | exeerrorcode: 0
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | exeerrordiag: 
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | exitcode: 0
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | exitmsg: OK
[2025-07-26 07:30:29] 2025-07-26 11:29:56,895 | INFO     | cpuconsumptiontime: 50956 s
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | nevents: 400
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | neventsw: 0
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | pid: 3184044
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | pgrp: 3184044
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | corecount: 12
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | event service: False
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | sizes: {0: 2396647, 1: 2397503, 7: 2397765, 12: 2397793, 5175: 2424039, 5176: 2433221, 5182: 2433359}
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | --------------------------------------------------
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | 
[2025-07-26 07:30:29] 2025-07-26 11:29:56,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 07:30:29] 2025-07-26 11:29:56,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,922 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 07:30:29] 2025-07-26 11:29:56,923 | INFO     | job 6745066345 has completed (purged errors)
[2025-07-26 07:30:29] 2025-07-26 11:29:56,923 | INFO     | overall cleanup function is called
[2025-07-26 07:30:29] 2025-07-26 11:29:57,931 | INFO     | --- collectZombieJob: --- 10, [3184044]
[2025-07-26 07:30:29] 2025-07-26 11:29:57,931 | INFO     | zombie collector waiting for pid 3184044
[2025-07-26 07:30:29] 2025-07-26 11:29:57,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 07:30:29] 2025-07-26 11:29:57,931 | INFO     | collected zombie processes
[2025-07-26 07:30:29] 2025-07-26 11:29:57,931 | INFO     | will attempt to kill all subprocesses of pid=3184044
[2025-07-26 07:30:29] 2025-07-26 11:29:58,276 | INFO     | process IDs to be killed: [3184044] (in reverse order)
[2025-07-26 07:30:29] 2025-07-26 11:29:58,372 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 07:30:29] 2025-07-26 11:29:58,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 07:30:29] 2025-07-26 11:29:58,383 | INFO     | did not find any defunct processes belonging to 3184044
[2025-07-26 07:30:29] 2025-07-26 11:29:58,394 | INFO     | did not find any defunct processes belonging to 3184044
[2025-07-26 07:30:29] 2025-07-26 11:29:58,394 | INFO     | ready for new job
[2025-07-26 07:30:29] 2025-07-26 11:29:58,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 07:30:29] 2025-07-26 11:29:58,397 | INFO     | ***************************************
[2025-07-26 07:30:29] 2025-07-26 11:29:58,397 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 07:30:29] 2025-07-26 11:29:58,397 | INFO     | ***************************************
[2025-07-26 07:30:29] 2025-07-26 11:29:58,397 | INFO     | 
[2025-07-26 07:30:29] 2025-07-26 11:29:58,413 | INFO     | architecture information:
[2025-07-26 07:30:29] 2025-07-26 11:29:58,413 | INFO     | executing command: cat /etc/os-release
[2025-07-26 07:30:29] 2025-07-26 11:29:58,435 | INFO     | cat /etc/os-release:
[2025-07-26 07:30:29] NAME="CentOS Linux"
[2025-07-26 07:30:29] VERSION="7 (Core)"
[2025-07-26 07:30:29] ID="centos"
[2025-07-26 07:30:29] ID_LIKE="rhel fedora"
[2025-07-26 07:30:29] VERSION_ID="7"
[2025-07-26 07:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 07:30:29] ANSI_COLOR="0;31"
[2025-07-26 07:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 07:30:29] HOME_URL="https://www.centos.org/"
[2025-07-26 07:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 07:30:29] 
[2025-07-26 07:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 07:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 07:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 07:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 07:30:29] 
[2025-07-26 07:30:29] 2025-07-26 11:29:58,436 | INFO     | ***************************************
[2025-07-26 07:30:29] 2025-07-26 11:29:58,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 07:30:29] 2025-07-26 11:29:58,958 | INFO     | sufficient remaining disk space (76529270784 B)
[2025-07-26 07:30:29] 2025-07-26 11:29:58,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 07:30:29] 2025-07-26 11:29:58,959 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 07:30:29] 2025-07-26 11:29:58,959 | INFO     | update_server=False
[2025-07-26 07:30:29] 2025-07-26 11:29:58,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 07:30:29] 2025-07-26 11:29:58,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:30:29] 2025-07-26 11:29:58,960 | INFO     | aborting loop
[2025-07-26 07:30:29] 2025-07-26 11:29:59,007 | INFO     | all data control threads have been joined
[2025-07-26 07:30:29] 2025-07-26 11:29:59,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 07:30:29] 2025-07-26 11:29:59,964 | INFO     | [job] retrieve thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:29:59,964 | INFO     | [job] job monitor thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,012 | INFO     | [data] control thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,017 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,067 | INFO     | all payload control threads have been joined
[2025-07-26 07:30:29] 2025-07-26 11:30:00,521 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,566 | INFO     | all job control threads have been joined
[2025-07-26 07:30:29] 2025-07-26 11:30:00,708 | INFO     | [payload] validate_post thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,762 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,771 | INFO     | [data] copytool_in thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:00,913 | INFO     | [job] validate thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:01,020 | INFO     | [payload] failed_post thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:01,072 | INFO     | [payload] control thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:01,157 | INFO     | [data] copytool_out thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:01,571 | INFO     | [job] control thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:01,739 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 07:30:29] 2025-07-26 11:30:01,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:30:29] 2025-07-26 11:30:02,909 | INFO     | [job] queue monitor thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:05,747 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:09,400 | INFO     | job.realtimelogging is not enabled
[2025-07-26 07:30:29] 2025-07-26 11:30:10,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 07:30:29] 2025-07-26 11:30:12,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041315469120)>', '<ExcThread(monitor, started 140040680232704)>']
[2025-07-26 07:30:29] 2025-07-26 11:30:17,346 | INFO     | all workflow threads have been joined
[2025-07-26 07:30:29] 2025-07-26 11:30:17,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 07:30:29] 2025-07-26 11:30:17,347 | INFO     | traces error code: 0
[2025-07-26 07:30:29] 2025-07-26 11:30:17,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 07:30:29] 2025-07-26 11:30:29,215 | INFO     | PID=3177151 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 07:30:29] 2025-07-26 11:30:29,216 | INFO     | .. there are 15 such processes running
[2025-07-26 07:30:29] 2025-07-26 11:30:29,217 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 07:30:29] 2025-07-26 11:30:29,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 07:30:29] 2025-07-26 11:30:29,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 07:30:29] 2025-07-26 11:30:29,217 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 07:30:29] 2025-07-26 11:30:29,217 | INFO     | [monitor] control thread has ended
[2025-07-26 07:30:29] 2025-07-26 11:30:29,407 [wrapper] ==== pilot stdout END ====
[2025-07-26 07:30:29] 2025-07-26 11:30:29,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 07:30:29] 2025-07-26 11:30:29,416 [wrapper] pilotpid: 3177151
[2025-07-26 07:30:29] 2025-07-26 11:30:29,421 [wrapper] Pilot exit status: 0
[2025-07-26 07:30:29] 2025-07-26 11:30:29,436 [wrapper] pandaids: 6745066345
[2025-07-26 07:30:29] 2025-07-26 11:30:29,523 [wrapper] cleanup supervisor_pilot 3286297 3177152
[2025-07-26 07:30:29] 2025-07-26 11:30:29,527 [wrapper] Test setup, not cleaning
[2025-07-26 07:30:29] 2025-07-26 11:30:29,532 [wrapper] apfmon messages muted
[2025-07-26 07:30:29] 2025-07-26 11:30:29,535 [wrapper] ==== wrapper stdout END ====
[2025-07-26 07:30:29] 2025-07-26 11:30:29,539 [wrapper] ==== wrapper stderr END ====
[2025-07-26 07:30:29]  *** Error codes and diagnostics ***
[2025-07-26 07:30:29]     "exeErrorCode": 0,
[2025-07-26 07:30:29]     "exeErrorDiag": "",
[2025-07-26 07:30:29]     "pilotErrorCode": 0,
[2025-07-26 07:30:29]     "pilotErrorDiag": "",
[2025-07-26 07:30:29]  *** Listing of results directory ***
[2025-07-26 07:30:29] total 358968
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 19:55 pilot3.tar.gz
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 19:57 queuedata.json
[2025-07-26 07:30:29] -rwx------. 1 boincer umatlas     36292 Jul 25 19:58 runpilot2-wrapper.sh
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas       100 Jul 26 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 07:30:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 06:03 run_atlas
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas       105 Jul 26 06:03 job.xml
[2025-07-26 07:30:29] -rw-r--r--. 2 boincer umatlas 142995030 Jul 26 06:03 EVNT.45743347._001626.pool.root.1
[2025-07-26 07:30:29] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 06:03 shared
[2025-07-26 07:30:29] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 06:03 input.tar.gz
[2025-07-26 07:30:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:03 start_atlas.sh
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas         0 Jul 26 06:03 boinc_lockfile
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 06:03 pandaJob.out
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas    980133 Jul 26 06:03 agis_schedconf.cvmfs.json
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas   1593052 Jul 26 06:03 agis_ddmendpoints.agis.ALL.json
[2025-07-26 07:30:29] drwx------. 4 boincer umatlas      4096 Jul 26 06:03 pilot3
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas 218975845 Jul 26 07:29 HITS.45743349._029015.pool.root.1
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas       530 Jul 26 07:29 boinc_task_state.xml
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas      1036 Jul 26 07:29 memory_monitor_summary.json
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas    364780 Jul 26 07:29 log.45743349._029015.job.log.tgz.1
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas      7816 Jul 26 07:29 heartbeat.json
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 07:30 init_data.xml
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas        95 Jul 26 07:30 pilot_heartbeat.json
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas       823 Jul 26 07:30 pilotlog.txt
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 07:30 boinc_mmap_file
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas        27 Jul 26 07:30 wrapper_checkpoint.txt
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas    502303 Jul 26 07:30 log.45743349._029015.job.log.1
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas       357 Jul 26 07:30 output.list
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas       620 Jul 26 07:30 runtime_log
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas    890880 Jul 26 07:30 result.tar.gz
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 07:30 runtime_log.err
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas       654 Jul 26 07:30 IGdKDmmThz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqnzKDmzF6Fdn.diag
[2025-07-26 07:30:29] -rw-r--r--. 1 boincer umatlas     21483 Jul 26 07:30 stderr.txt
[2025-07-26 07:30:29] HITS file was successfully produced:
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas 218975845 Jul 26 07:29 shared/HITS.pool.root.1
[2025-07-26 07:30:29]  *** Contents of shared directory: ***
[2025-07-26 07:30:29] total 354912
[2025-07-26 07:30:29] -rw-r--r--. 2 boincer umatlas 142995030 Jul 26 06:03 ATLAS.root_0
[2025-07-26 07:30:29] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 06:03 input.tar.gz
[2025-07-26 07:30:29] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:03 start_atlas.sh
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas 218975845 Jul 26 07:29 HITS.pool.root.1
[2025-07-26 07:30:29] -rw-------. 1 boincer umatlas    890880 Jul 26 07:30 result.tar.gz
07:30:31 (3173360): run_atlas exited; CPU time 50989.935517
07:30:31 (3173360): called boinc_finish(0)

</stderr_txt>
]]>

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