Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:40:49 (22921): wrapper (7.7.26015): starting
04:40:49 (22921): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 04:40:49] Arguments: --nthreads 12
[2025-07-26 04:40:49] Threads: 12
[2025-07-26 04:40:49] Checking for CVMFS
[2025-07-26 04:40:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 04:40:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 04:40:49] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 04:40:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 04:40:50] 2.11.2.0 2937 110334 97664 148769 2 59 17863880 20275200 1 130560 0 37318583 99.971 10168556 11371 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 04:40:50] CVMFS is ok
[2025-07-26 04:40:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 04:40:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 04:40:50] Further information can be found at the LHC@home message board.
[2025-07-26 04:40:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 04:40:50] Checking for apptainer binary...
[2025-07-26 04:40:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 04:40:50] Running /usr/bin/apptainer --version
[2025-07-26 04:40:50] apptainer version 1.3.2-1.el7
[2025-07-26 04:40:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 04:40:51] c-205-8.aglt2.org
[2025-07-26 04:40:51] apptainer works
[2025-07-26 04:40:51] Set ATHENA_PROC_NUMBER=12
[2025-07-26 04:40:51] Set ATHENA_CORE_NUMBER=12
[2025-07-26 04:40:51] Starting ATLAS job with PandaID=6745065817
[2025-07-26 04:40:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 06:04:08]  *** The last 200 lines of the pilot log: ***
[2025-07-26 06:04:08]  mtime=0
[2025-07-26 06:04:08]  protocol_id=None
[2025-07-26 06:04:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 06:04:08]  replicas=None
[2025-07-26 06:04:08]  scope=mc23_13p6TeV
[2025-07-26 06:04:08]  status=None
[2025-07-26 06:04:08]  status_code=0
[2025-07-26 06:04:08]  storage_token=
[2025-07-26 06:04:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745065817/log.45743349._028757.job.log.tgz.1
[2025-07-26 06:04:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/a9/log.45743349._028757.job.log.tgz.1
[2025-07-26 06:04:08]  workdir=None
[2025-07-26 06:04:08] ]
[2025-07-26 06:04:08] 2025-07-26 10:03:47,111 | INFO     | transferring file log.45743349._028757.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745065817/log.45743349._028757.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 06:04:08] 2025-07-26 10:03:47,111 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745065817/log.45743349._028757.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._028757.job
[2025-07-26 06:04:08] 2025-07-26 10:03:47,134 | INFO     | adding to output.list: log.45743349._028757.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/a9/log.45743349._028757.job.log.tg
[2025-07-26 06:04:08] 2025-07-26 10:03:47,135 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 06:04:08] 2025-07-26 10:03:47,135 | INFO     | summary of transferred files:
[2025-07-26 06:04:08] 2025-07-26 10:03:47,136 | INFO     |  -- lfn=log.45743349._028757.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 06:04:08] 2025-07-26 10:03:47,136 | INFO     | stage-out finished correctly
[2025-07-26 06:04:08] 2025-07-26 10:03:47,878 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 06:04:08] 2025-07-26 10:03:48,687 | INFO     | job 6745065817 has state=finished
[2025-07-26 06:04:08] 2025-07-26 10:03:48,690 | INFO     | preparing for final server update for job 6745065817 in state='finished'
[2025-07-26 06:04:08] 2025-07-26 10:03:48,690 | INFO     | this job has now completed (state=finished)
[2025-07-26 06:04:08] 2025-07-26 10:03:48,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 06:04:08] 2025-07-26 10:03:48,691 | INFO     | log transfer has been attempted: DONE
[2025-07-26 06:04:08] 2025-07-26 10:03:48,691 | INFO     | job 6745065817 has finished - writing final server update
[2025-07-26 06:04:08] 2025-07-26 10:03:48,691 | INFO     | total number of processed events: 400 (read)
[2025-07-26 06:04:08] 2025-07-26 10:03:48,692 | INFO     | executing command: lscpu
[2025-07-26 06:04:08] 2025-07-26 10:03:48,718 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 06:04:08] 2025-07-26 10:03:50,365 | WARNING  | process 531 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 06:04:08] 2025-07-26 10:03:50,365 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745065817/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 06:04:08] 2025-07-26 10:03:50,455 | INFO     | number of running child processes to parent process 531: 1
[2025-07-26 06:04:08] 2025-07-26 10:03:50,455 | INFO     | maximum number of monitored processes: 6
[2025-07-26 06:04:08] 2025-07-26 10:03:52,958 | INFO     | monitor loop #370: job 0:6745065817 is in state 'finished'
[2025-07-26 06:04:08] 2025-07-26 10:03:52,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,577 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 06:04:08] 2025-07-26 10:03:53,580 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1828.8333333333333
[2025-07-26 06:04:08] 2025-07-26 10:03:53,582 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745065817/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,583 | INFO     | extracted standard info from prmon json
[2025-07-26 06:04:08] 2025-07-26 10:03:53,583 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 06:04:08] 2025-07-26 10:03:53,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 06:04:08] 2025-07-26 10:03:53,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 06:04:08] 2025-07-26 10:03:53,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 06:04:08] 2025-07-26 10:03:53,586 | INFO     | fitting pss+swap vs Time
[2025-07-26 06:04:08] 2025-07-26 10:03:53,586 | INFO     | sum of square deviations: 125630262.5
[2025-07-26 06:04:08] 2025-07-26 10:03:53,587 | INFO     | sum of deviations: 1658540986.5
[2025-07-26 06:04:08] 2025-07-26 10:03:53,587 | INFO     | mean x: 1753521826.5
[2025-07-26 06:04:08] 2025-07-26 10:03:53,587 | INFO     | mean y: 2678574.689189189
[2025-07-26 06:04:08] 2025-07-26 10:03:53,587 | INFO     | -- intersect: -23146901487.460182
[2025-07-26 06:04:08] 2025-07-26 10:03:53,588 | INFO     | intersect: -23146901487.460182
[2025-07-26 06:04:08] 2025-07-26 10:03:53,588 | INFO     | chi2: 0.05777799579004
[2025-07-26 06:04:08] 2025-07-26 10:03:53,588 | INFO     | -- intersect: -23146901487.460182
[2025-07-26 06:04:08] 2025-07-26 10:03:53,588 | INFO     | current memory leak: 13.20 B/s (using 74 data points, chi2=0.06)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | could have reported an average CPU frequency of 2054 MHz (6 samples)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | ..............................
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | . Timing measurements:
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | . get job = 0 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | . initial setup = 2 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | . payload setup = 9 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | . stage-in = 0 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,589 | INFO     | . payload execution = 4934 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,590 | INFO     | . stage-out = 0 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,590 | INFO     | . log creation = 0 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,590 | INFO     | ..............................
[2025-07-26 06:04:08] 2025-07-26 10:03:53,675 | INFO     | 
[2025-07-26 06:04:08] 2025-07-26 10:03:53,675 | INFO     | job summary report
[2025-07-26 06:04:08] 2025-07-26 10:03:53,675 | INFO     | --------------------------------------------------
[2025-07-26 06:04:08] 2025-07-26 10:03:53,675 | INFO     | PanDA job id: 6745065817
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | task id: 45743349
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | errors: (none)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | pilot state: finished 
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | transexitcode: 0
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | exeerrorcode: 0
[2025-07-26 06:04:08] 2025-07-26 10:03:53,676 | INFO     | exeerrordiag: 
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | exitcode: 0
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | exitmsg: OK
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | cpuconsumptiontime: 52962 s
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | nevents: 400
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | neventsw: 0
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | pid: 531
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | pgrp: 531
[2025-07-26 06:04:08] 2025-07-26 10:03:53,677 | INFO     | corecount: 12
[2025-07-26 06:04:08] 2025-07-26 10:03:53,678 | INFO     | event service: False
[2025-07-26 06:04:08] 2025-07-26 10:03:53,678 | INFO     | sizes: {0: 2397424, 1: 2397424, 5: 2397714, 11: 2397770, 4944: 2424085, 4946: 2433083, 4947: 2433267, 4953: 2433461}
[2025-07-26 06:04:08] 2025-07-26 10:03:53,678 | INFO     | --------------------------------------------------
[2025-07-26 06:04:08] 2025-07-26 10:03:53,678 | INFO     | 
[2025-07-26 06:04:08] 2025-07-26 10:03:53,678 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 06:04:08] 2025-07-26 10:03:53,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,710 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 06:04:08] 2025-07-26 10:03:53,711 | INFO     | job 6745065817 has completed (purged errors)
[2025-07-26 06:04:08] 2025-07-26 10:03:53,711 | INFO     | overall cleanup function is called
[2025-07-26 06:04:08] 2025-07-26 10:03:54,701 | INFO     | PID=26512 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 06:04:08] 2025-07-26 10:03:54,719 | INFO     | --- collectZombieJob: --- 10, [531]
[2025-07-26 06:04:08] 2025-07-26 10:03:54,719 | INFO     | zombie collector waiting for pid 531
[2025-07-26 06:04:08] 2025-07-26 10:03:54,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 06:04:08] 2025-07-26 10:03:54,720 | INFO     | collected zombie processes
[2025-07-26 06:04:08] 2025-07-26 10:03:54,720 | INFO     | will attempt to kill all subprocesses of pid=531
[2025-07-26 06:04:08] 2025-07-26 10:03:54,813 | INFO     | process IDs to be killed: [531] (in reverse order)
[2025-07-26 06:04:08] 2025-07-26 10:03:54,865 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 06:04:08] 2025-07-26 10:03:54,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 06:04:08] 2025-07-26 10:03:54,869 | INFO     | did not find any defunct processes belonging to 531
[2025-07-26 06:04:08] 2025-07-26 10:03:54,872 | INFO     | did not find any defunct processes belonging to 531
[2025-07-26 06:04:08] 2025-07-26 10:03:54,873 | INFO     | ready for new job
[2025-07-26 06:04:08] 2025-07-26 10:03:54,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 06:04:08] 2025-07-26 10:03:54,874 | INFO     | ***************************************
[2025-07-26 06:04:08] 2025-07-26 10:03:54,874 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 06:04:08] 2025-07-26 10:03:54,874 | INFO     | ***************************************
[2025-07-26 06:04:08] 2025-07-26 10:03:54,875 | INFO     | 
[2025-07-26 06:04:08] 2025-07-26 10:03:54,875 | INFO     | architecture information:
[2025-07-26 06:04:08] 2025-07-26 10:03:54,876 | INFO     | executing command: cat /etc/os-release
[2025-07-26 06:04:08] 2025-07-26 10:03:54,893 | INFO     | cat /etc/os-release:
[2025-07-26 06:04:08] NAME="CentOS Linux"
[2025-07-26 06:04:08] VERSION="7 (Core)"
[2025-07-26 06:04:08] ID="centos"
[2025-07-26 06:04:08] ID_LIKE="rhel fedora"
[2025-07-26 06:04:08] VERSION_ID="7"
[2025-07-26 06:04:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 06:04:08] ANSI_COLOR="0;31"
[2025-07-26 06:04:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 06:04:08] HOME_URL="https://www.centos.org/"
[2025-07-26 06:04:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 06:04:08] 
[2025-07-26 06:04:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 06:04:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 06:04:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 06:04:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 06:04:08] 
[2025-07-26 06:04:08] 2025-07-26 10:03:54,893 | INFO     | ***************************************
[2025-07-26 06:04:08] 2025-07-26 10:03:55,396 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 06:04:08] 2025-07-26 10:03:55,415 | INFO     | sufficient remaining disk space (29524754432 B)
[2025-07-26 06:04:08] 2025-07-26 10:03:55,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 06:04:08] 2025-07-26 10:03:55,415 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 06:04:08] 2025-07-26 10:03:55,415 | INFO     | update_server=False
[2025-07-26 06:04:08] 2025-07-26 10:03:55,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 06:04:08] 2025-07-26 10:03:55,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 06:04:08] 2025-07-26 10:03:55,416 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 06:04:08] 2025-07-26 10:03:55,417 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 06:04:08] 2025-07-26 10:03:55,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 06:04:08] 2025-07-26 10:03:55,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 06:04:08] 2025-07-26 10:03:55,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 06:04:08] 2025-07-26 10:03:55,462 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 06:04:08] 2025-07-26 10:03:55,462 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 06:04:08] 2025-07-26 10:03:55,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 06:04:08] 2025-07-26 10:03:55,462 | INFO     | will abort loop
[2025-07-26 06:04:08] 2025-07-26 10:03:56,222 | INFO     | all data control threads have been joined
[2025-07-26 06:04:08] 2025-07-26 10:03:56,315 | INFO     | all job control threads have been joined
[2025-07-26 06:04:08] 2025-07-26 10:03:56,418 | INFO     | [job] retrieve thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:56,422 | INFO     | [job] queue monitor thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:56,468 | INFO     | [job] job monitor thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:56,616 | INFO     | [data] copytool_in thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:56,653 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:56,751 | INFO     | all payload control threads have been joined
[2025-07-26 06:04:08] 2025-07-26 10:03:56,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:56,905 | INFO     | [payload] failed_post thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,227 | INFO     | [data] control thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,321 | INFO     | [job] control thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,423 | INFO     | [data] copytool_out thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,475 | INFO     | [payload] validate_post thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,478 | INFO     | [job] validate thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,682 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,757 | INFO     | [payload] control thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:57,783 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:03:58,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 06:04:08] 2025-07-26 10:04:02,476 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 06:04:08] 2025-07-26 10:04:03,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633417267008)>', '<ExcThread(monitor, started 139632457012992)>']
[2025-07-26 06:04:08] 2025-07-26 10:04:03,456 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 06:04:08] 2025-07-26 10:04:03,456 | INFO     | [monitor] control thread has ended
[2025-07-26 06:04:08] 2025-07-26 10:04:08,028 | INFO     | all workflow threads have been joined
[2025-07-26 06:04:08] 2025-07-26 10:04:08,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 06:04:08] 2025-07-26 10:04:08,028 | INFO     | traces error code: 0
[2025-07-26 06:04:08] 2025-07-26 10:04:08,028 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 06:04:08] 2025-07-26 10:04:08,121 [wrapper] ==== pilot stdout END ====
[2025-07-26 06:04:08] 2025-07-26 10:04:08,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 06:04:08] 2025-07-26 10:04:08,127 [wrapper] pilotpid: 26512
[2025-07-26 06:04:08] 2025-07-26 10:04:08,131 [wrapper] Pilot exit status: 0
[2025-07-26 06:04:08] 2025-07-26 10:04:08,146 [wrapper] pandaids: 6745065817
[2025-07-26 06:04:08] 2025-07-26 10:04:08,184 [wrapper] cleanup supervisor_pilot 15332 26513
[2025-07-26 06:04:08] 2025-07-26 10:04:08,188 [wrapper] Test setup, not cleaning
[2025-07-26 06:04:08] 2025-07-26 10:04:08,192 [wrapper] apfmon messages muted
[2025-07-26 06:04:08] 2025-07-26 10:04:08,195 [wrapper] ==== wrapper stdout END ====
[2025-07-26 06:04:08] 2025-07-26 10:04:08,199 [wrapper] ==== wrapper stderr END ====
[2025-07-26 06:04:08]  *** Error codes and diagnostics ***
[2025-07-26 06:04:08]     "exeErrorCode": 0,
[2025-07-26 06:04:08]     "exeErrorDiag": "",
[2025-07-26 06:04:08]     "pilotErrorCode": 0,
[2025-07-26 06:04:08]     "pilotErrorDiag": "",
[2025-07-26 06:04:08]  *** Listing of results directory ***
[2025-07-26 06:04:08] total 348044
[2025-07-26 06:04:08] -rwx------ 1 boincer umatlas     36292 Jul 25 19:32 runpilot2-wrapper.sh
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 19:32 queuedata.json
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 19:32 pilot3.tar.gz
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas       100 Jul 26 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 06:04:08] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 04:40 run_atlas
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas       105 Jul 26 04:40 job.xml
[2025-07-26 06:04:08] -rw-r--r-- 2 boincer umatlas 143636262 Jul 26 04:40 EVNT.45743347._001609.pool.root.1
[2025-07-26 06:04:08] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 04:40 start_atlas.sh
[2025-07-26 06:04:08] drwxrwx--x 2 boincer umatlas      4096 Jul 26 04:40 shared
[2025-07-26 06:04:08] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 04:40 input.tar.gz
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas         0 Jul 26 04:40 boinc_lockfile
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas      2562 Jul 26 04:40 pandaJob.out
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas    980133 Jul 26 04:41 agis_schedconf.cvmfs.json
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas   1593052 Jul 26 04:41 agis_ddmendpoints.agis.ALL.json
[2025-07-26 06:04:08] drwx------ 4 boincer umatlas      4096 Jul 26 04:41 pilot3
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas      5867 Jul 26 05:56 init_data.xml
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas        95 Jul 26 06:03 pilot_heartbeat.json
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas 207226649 Jul 26 06:03 HITS.45743349._028757.pool.root.1
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas       529 Jul 26 06:03 boinc_task_state.xml
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas      1046 Jul 26 06:03 memory_monitor_summary.json
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas    358323 Jul 26 06:03 log.45743349._028757.job.log.tgz.1
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas      7849 Jul 26 06:03 heartbeat.json
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 06:04 boinc_mmap_file
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas        27 Jul 26 06:04 wrapper_checkpoint.txt
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas      4666 Jul 26 06:04 pilotlog.txt
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas    470513 Jul 26 06:04 log.45743349._028757.job.log.1
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas       357 Jul 26 06:04 output.list
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas       620 Jul 26 06:04 runtime_log
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas    849920 Jul 26 06:04 result.tar.gz
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas      8657 Jul 26 06:04 runtime_log.err
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas       658 Jul 26 06:04 PctNDmW5gz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiiQLDmZGp3nn.diag
[2025-07-26 06:04:08] -rw-r--r-- 1 boincer umatlas     21736 Jul 26 06:04 stderr.txt
[2025-07-26 06:04:08] HITS file was successfully produced:
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas 207226649 Jul 26 06:03 shared/HITS.pool.root.1
[2025-07-26 06:04:08]  *** Contents of shared directory: ***
[2025-07-26 06:04:08] total 344024
[2025-07-26 06:04:08] -rw-r--r-- 2 boincer umatlas 143636262 Jul 26 04:40 ATLAS.root_0
[2025-07-26 06:04:08] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 04:40 start_atlas.sh
[2025-07-26 06:04:08] -rw-r--r-- 2 boincer umatlas    542882 Jul 26 04:40 input.tar.gz
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas 207226649 Jul 26 06:03 HITS.pool.root.1
[2025-07-26 06:04:08] -rw------- 1 boincer umatlas    849920 Jul 26 06:04 result.tar.gz
06:04:10 (22921): run_atlas exited; CPU time 52940.025744
06:04:10 (22921): called boinc_finish(0)

</stderr_txt>
]]>

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