Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:19:19 (4207): wrapper (7.7.26015): starting
04:19:19 (4207): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 04:19:19] Arguments: --nthreads 12
[2025-07-26 04:19:19] Threads: 12
[2025-07-26 04:19:19] Checking for CVMFS
[2025-07-26 04:19:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 04:19:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 04:19:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 04:19:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 04:19:20] 2.11.2.0 3035 110267 97104 148769 0 56 14743671 20275200 1 130560 0 36350294 99.970 10075391 11076 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 04:19:20] CVMFS is ok
[2025-07-26 04:19:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 04:19:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 04:19:20] Further information can be found at the LHC@home message board.
[2025-07-26 04:19:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 04:19:20] Checking for apptainer binary...
[2025-07-26 04:19:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 04:19:20] Running /usr/bin/apptainer --version
[2025-07-26 04:19:20] apptainer version 1.3.2-1.el7
[2025-07-26 04:19:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 04:19:21] c-205-31.aglt2.org
[2025-07-26 04:19:21] apptainer works
[2025-07-26 04:19:21] Set ATHENA_PROC_NUMBER=12
[2025-07-26 04:19:21] Set ATHENA_CORE_NUMBER=12
[2025-07-26 04:19:21] Starting ATLAS job with PandaID=6745093582
[2025-07-26 04:19:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:46:33]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:46:33]  mtime=0
[2025-07-26 05:46:33]  protocol_id=None
[2025-07-26 05:46:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 05:46:33]  replicas=None
[2025-07-26 05:46:33]  scope=mc23_13p6TeV
[2025-07-26 05:46:33]  status=None
[2025-07-26 05:46:33]  status_code=0
[2025-07-26 05:46:33]  storage_token=
[2025-07-26 05:46:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745093582/log.45743349._030719.job.log.tgz.1
[2025-07-26 05:46:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/67/log.45743349._030719.job.log.tgz.1
[2025-07-26 05:46:33]  workdir=None
[2025-07-26 05:46:33] ]
[2025-07-26 05:46:33] 2025-07-26 09:45:53,400 | INFO     | transferring file log.45743349._030719.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745093582/log.45743349._030719.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 05:46:33] 2025-07-26 09:45:53,400 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745093582/log.45743349._030719.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._030719.job
[2025-07-26 05:46:33] 2025-07-26 09:45:53,425 | INFO     | adding to output.list: log.45743349._030719.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/67/log.45743349._030719.job.log.tg
[2025-07-26 05:46:33] 2025-07-26 09:45:53,426 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 05:46:33] 2025-07-26 09:45:53,426 | INFO     | summary of transferred files:
[2025-07-26 05:46:33] 2025-07-26 09:45:53,426 | INFO     |  -- lfn=log.45743349._030719.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 05:46:33] 2025-07-26 09:45:53,426 | INFO     | stage-out finished correctly
[2025-07-26 05:46:33] 2025-07-26 09:45:54,813 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 05:46:33] 2025-07-26 09:45:55,002 | INFO     | monitor loop #389: job 0:6745093582 is in state 'finished'
[2025-07-26 05:46:33] 2025-07-26 09:45:55,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:46:33] 2025-07-26 09:45:55,475 | INFO     | job 6745093582 has state=finished
[2025-07-26 05:46:33] 2025-07-26 09:45:55,475 | INFO     | preparing for final server update for job 6745093582 in state='finished'
[2025-07-26 05:46:33] 2025-07-26 09:45:55,476 | INFO     | this job has now completed (state=finished)
[2025-07-26 05:46:33] 2025-07-26 09:45:55,476 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 05:46:33] 2025-07-26 09:45:55,476 | INFO     | log transfer has been attempted: DONE
[2025-07-26 05:46:33] 2025-07-26 09:45:55,476 | INFO     | job 6745093582 has finished - writing final server update
[2025-07-26 05:46:33] 2025-07-26 09:45:55,477 | INFO     | total number of processed events: 400 (read)
[2025-07-26 05:46:33] 2025-07-26 09:45:55,478 | INFO     | executing command: lscpu
[2025-07-26 05:46:33] 2025-07-26 09:45:55,503 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 05:46:33] 2025-07-26 09:45:57,505 | INFO     | monitor loop #390: job 0:6745093582 is in state 'finished'
[2025-07-26 05:46:33] 2025-07-26 09:45:57,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,008 | INFO     | monitor loop #391: job 0:6745093582 is in state 'finished'
[2025-07-26 05:46:33] 2025-07-26 09:46:00,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,120 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 05:46:33] 2025-07-26 09:46:00,124 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-07-26 05:46:33] 2025-07-26 09:46:00,126 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745093582/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,127 | INFO     | extracted standard info from prmon json
[2025-07-26 05:46:33] 2025-07-26 09:46:00,127 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:46:33] 2025-07-26 09:46:00,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:46:33] 2025-07-26 09:46:00,127 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:46:33] 2025-07-26 09:46:00,127 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:46:33] 2025-07-26 09:46:00,129 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:46:33] 2025-07-26 09:46:00,129 | INFO     | sum of square deviations: 147126479.5
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | sum of deviations: -7237106855.999999
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | mean x: 1753520659.5
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | mean y: 2740649.512820513
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | -- intersect: 86257889485.62079
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | intersect: 86257889485.62079
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | chi2: 0.08859475868416122
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | -- intersect: 86257889485.62079
[2025-07-26 05:46:33] 2025-07-26 09:46:00,130 | INFO     | current memory leak: -49.19 B/s (using 78 data points, chi2=0.09)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | could have reported an average CPU frequency of 2048 MHz (6 samples)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | ..............................
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | . Timing measurements:
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | . get job = 0 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | . initial setup = 2 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | . payload setup = 9 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,131 | INFO     | . stage-in = 0 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,132 | INFO     | . payload execution = 5147 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,132 | INFO     | . stage-out = 0 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,132 | INFO     | . log creation = 0 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,132 | INFO     | ..............................
[2025-07-26 05:46:33] 2025-07-26 09:46:00,627 | INFO     | 
[2025-07-26 05:46:33] 2025-07-26 09:46:00,628 | INFO     | job summary report
[2025-07-26 05:46:33] 2025-07-26 09:46:00,628 | INFO     | --------------------------------------------------
[2025-07-26 05:46:33] 2025-07-26 09:46:00,628 | INFO     | PanDA job id: 6745093582
[2025-07-26 05:46:33] 2025-07-26 09:46:00,628 | INFO     | task id: 45743349
[2025-07-26 05:46:33] 2025-07-26 09:46:00,628 | INFO     | errors: (none)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,628 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:46:33] 2025-07-26 09:46:00,629 | INFO     | pilot state: finished 
[2025-07-26 05:46:33] 2025-07-26 09:46:00,629 | INFO     | transexitcode: 0
[2025-07-26 05:46:33] 2025-07-26 09:46:00,629 | INFO     | exeerrorcode: 0
[2025-07-26 05:46:33] 2025-07-26 09:46:00,629 | INFO     | exeerrordiag: 
[2025-07-26 05:46:33] 2025-07-26 09:46:00,629 | INFO     | exitcode: 0
[2025-07-26 05:46:33] 2025-07-26 09:46:00,629 | INFO     | exitmsg: OK
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | cpuconsumptiontime: 56254 s
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | nevents: 400
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | neventsw: 0
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | pid: 14316
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | pgrp: 14316
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | corecount: 12
[2025-07-26 05:46:33] 2025-07-26 09:46:00,630 | INFO     | event service: False
[2025-07-26 05:46:33] 2025-07-26 09:46:00,631 | INFO     | sizes: {0: 2397248, 1: 2397503, 6: 2397765, 12: 2397793, 5161: 2424124, 5162: 2424123, 5163: 2433305, 5164: 2433361, 5169: 2433555}
[2025-07-26 05:46:33] 2025-07-26 09:46:00,631 | INFO     | --------------------------------------------------
[2025-07-26 05:46:33] 2025-07-26 09:46:00,631 | INFO     | 
[2025-07-26 05:46:33] 2025-07-26 09:46:00,631 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 05:46:33] 2025-07-26 09:46:00,656 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,657 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,657 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,657 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,660 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:46:33] 2025-07-26 09:46:00,660 | INFO     | job 6745093582 has completed (purged errors)
[2025-07-26 05:46:33] 2025-07-26 09:46:00,660 | INFO     | overall cleanup function is called
[2025-07-26 05:46:33] 2025-07-26 09:46:01,668 | INFO     | --- collectZombieJob: --- 10, [14316]
[2025-07-26 05:46:33] 2025-07-26 09:46:01,669 | INFO     | zombie collector waiting for pid 14316
[2025-07-26 05:46:33] 2025-07-26 09:46:01,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:46:33] 2025-07-26 09:46:01,669 | INFO     | collected zombie processes
[2025-07-26 05:46:33] 2025-07-26 09:46:01,669 | INFO     | will attempt to kill all subprocesses of pid=14316
[2025-07-26 05:46:33] 2025-07-26 09:46:01,761 | INFO     | process IDs to be killed: [14316] (in reverse order)
[2025-07-26 05:46:33] 2025-07-26 09:46:01,812 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:46:33] 2025-07-26 09:46:01,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:46:33] 2025-07-26 09:46:01,816 | INFO     | did not find any defunct processes belonging to 14316
[2025-07-26 05:46:33] 2025-07-26 09:46:01,818 | INFO     | did not find any defunct processes belonging to 14316
[2025-07-26 05:46:33] 2025-07-26 09:46:01,818 | INFO     | ready for new job
[2025-07-26 05:46:33] 2025-07-26 09:46:01,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:46:33] 2025-07-26 09:46:01,819 | INFO     | ***************************************
[2025-07-26 05:46:33] 2025-07-26 09:46:01,819 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:46:33] 2025-07-26 09:46:01,819 | INFO     | ***************************************
[2025-07-26 05:46:33] 2025-07-26 09:46:01,820 | INFO     | 
[2025-07-26 05:46:33] 2025-07-26 09:46:01,820 | INFO     | architecture information:
[2025-07-26 05:46:33] 2025-07-26 09:46:01,821 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:46:33] 2025-07-26 09:46:01,836 | INFO     | cat /etc/os-release:
[2025-07-26 05:46:33] NAME="CentOS Linux"
[2025-07-26 05:46:33] VERSION="7 (Core)"
[2025-07-26 05:46:33] ID="centos"
[2025-07-26 05:46:33] ID_LIKE="rhel fedora"
[2025-07-26 05:46:33] VERSION_ID="7"
[2025-07-26 05:46:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:46:33] ANSI_COLOR="0;31"
[2025-07-26 05:46:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:46:33] HOME_URL="https://www.centos.org/"
[2025-07-26 05:46:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:46:33] 
[2025-07-26 05:46:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:46:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:46:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:46:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:46:33] 
[2025-07-26 05:46:33] 2025-07-26 09:46:01,836 | INFO     | ***************************************
[2025-07-26 05:46:33] 2025-07-26 09:46:02,339 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 05:46:33] 2025-07-26 09:46:02,358 | INFO     | sufficient remaining disk space (29425139712 B)
[2025-07-26 05:46:33] 2025-07-26 09:46:02,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:46:33] 2025-07-26 09:46:02,358 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:46:33] 2025-07-26 09:46:02,359 | INFO     | update_server=False
[2025-07-26 05:46:33] 2025-07-26 09:46:02,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:46:33] 2025-07-26 09:46:02,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:46:33] 2025-07-26 09:46:02,367 | INFO     | all payload control threads have been joined
[2025-07-26 05:46:33] 2025-07-26 09:46:02,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 05:46:33] 2025-07-26 09:46:02,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 05:46:33] 2025-07-26 09:46:02,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:46:33] 2025-07-26 09:46:02,512 | INFO     | will abort loop
[2025-07-26 05:46:33] 2025-07-26 09:46:03,364 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:03,373 | INFO     | [payload] control thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:03,395 | INFO     | all data control threads have been joined
[2025-07-26 05:46:33] 2025-07-26 09:46:03,457 | INFO     | all job control threads have been joined
[2025-07-26 05:46:33] 2025-07-26 09:46:03,459 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:03,471 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:03,517 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:03,697 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:03,848 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:04,362 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:04,362 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:04,401 | INFO     | [data] control thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:04,463 | INFO     | [job] control thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:04,685 | INFO     | [job] validate thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:04,858 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:05,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:46:33] 2025-07-26 09:46:05,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:46:33] 2025-07-26 09:46:06,231 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:09,408 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:12,491 | INFO     | job.realtimelogging is not enabled
[2025-07-26 05:46:33] 2025-07-26 09:46:13,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:46:33] 2025-07-26 09:46:13,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849839454016)>', '<ExcThread(monitor, started 139848958600960)>']
[2025-07-26 05:46:33] 2025-07-26 09:46:18,594 | INFO     | all workflow threads have been joined
[2025-07-26 05:46:33] 2025-07-26 09:46:18,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:46:33] 2025-07-26 09:46:18,594 | INFO     | traces error code: 0
[2025-07-26 05:46:33] 2025-07-26 09:46:18,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:46:33] 2025-07-26 09:46:33,181 | INFO     | PID=7799 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 05:46:33] 2025-07-26 09:46:33,182 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:46:33] 2025-07-26 09:46:33,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:46:33] 2025-07-26 09:46:33,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:46:33] 2025-07-26 09:46:33,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:46:33] 2025-07-26 09:46:33,182 | INFO     | [monitor] control thread has ended
[2025-07-26 05:46:33] 2025-07-26 09:46:33,265 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:46:33] 2025-07-26 09:46:33,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:46:33] 2025-07-26 09:46:33,273 [wrapper] pilotpid: 7799
[2025-07-26 05:46:33] 2025-07-26 09:46:33,277 [wrapper] Pilot exit status: 0
[2025-07-26 05:46:33] 2025-07-26 09:46:33,291 [wrapper] pandaids: 6745093582
[2025-07-26 05:46:33] 2025-07-26 09:46:33,330 [wrapper] cleanup supervisor_pilot  8977 7800
[2025-07-26 05:46:33] 2025-07-26 09:46:33,333 [wrapper] Test setup, not cleaning
[2025-07-26 05:46:33] 2025-07-26 09:46:33,337 [wrapper] apfmon messages muted
[2025-07-26 05:46:33] 2025-07-26 09:46:33,340 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:46:33] 2025-07-26 09:46:33,344 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:46:33]  *** Error codes and diagnostics ***
[2025-07-26 05:46:33]     "exeErrorCode": 0,
[2025-07-26 05:46:33]     "exeErrorDiag": "",
[2025-07-26 05:46:33]     "pilotErrorCode": 0,
[2025-07-26 05:46:33]     "pilotErrorDiag": "",
[2025-07-26 05:46:33]  *** Listing of results directory ***
[2025-07-26 05:46:33] total 400688
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 22:23 pilot3.tar.gz
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 22:26 queuedata.json
[2025-07-26 05:46:33] -rwx------ 1 boincer umatlas     36292 Jul 25 22:27 runpilot2-wrapper.sh
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas       100 Jul 26 04:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:46:33] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 04:19 run_atlas
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas       105 Jul 26 04:19 job.xml
[2025-07-26 05:46:33] -rw-r--r-- 2 boincer umatlas 186985594 Jul 26 04:19 EVNT.45743347._001712.pool.root.1
[2025-07-26 05:46:33] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 04:19 start_atlas.sh
[2025-07-26 05:46:33] drwxrwx--x 2 boincer umatlas      4096 Jul 26 04:19 shared
[2025-07-26 05:46:33] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 04:19 input.tar.gz
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas         0 Jul 26 04:19 boinc_lockfile
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 04:19 pandaJob.out
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas    980133 Jul 26 04:19 agis_schedconf.cvmfs.json
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas   1593052 Jul 26 04:19 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:46:33] drwx------ 4 boincer umatlas      4096 Jul 26 04:19 pilot3
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 05:38 init_data.xml
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas 217733545 Jul 26 05:45 HITS.45743349._030719.pool.root.1
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas       529 Jul 26 05:45 boinc_task_state.xml
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas        95 Jul 26 05:45 pilot_heartbeat.json
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas      1050 Jul 26 05:45 memory_monitor_summary.json
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas    367881 Jul 26 05:45 log.45743349._030719.job.log.tgz.1
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas      7852 Jul 26 05:46 heartbeat.json
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 05:46 boinc_mmap_file
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas        27 Jul 26 05:46 wrapper_checkpoint.txt
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas       744 Jul 26 05:46 pilotlog.txt
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas    491267 Jul 26 05:46 log.45743349._030719.job.log.1
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas       357 Jul 26 05:46 output.list
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas       620 Jul 26 05:46 runtime_log
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas    880640 Jul 26 05:46 result.tar.gz
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 05:46 runtime_log.err
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas       659 Jul 26 05:46 39yLDmAojz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDml1QLDmvoqnXo.diag
[2025-07-26 05:46:33] -rw-r--r-- 1 boincer umatlas     21719 Jul 26 05:46 stderr.txt
[2025-07-26 05:46:33] HITS file was successfully produced:
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas 217733545 Jul 26 05:45 shared/HITS.pool.root.1
[2025-07-26 05:46:33]  *** Contents of shared directory: ***
[2025-07-26 05:46:33] total 396644
[2025-07-26 05:46:33] -rw-r--r-- 2 boincer umatlas 186985594 Jul 26 04:19 ATLAS.root_0
[2025-07-26 05:46:33] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 04:19 start_atlas.sh
[2025-07-26 05:46:33] -rw-r--r-- 2 boincer umatlas    542889 Jul 26 04:19 input.tar.gz
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas 217733545 Jul 26 05:45 HITS.pool.root.1
[2025-07-26 05:46:33] -rw------- 1 boincer umatlas    880640 Jul 26 05:46 result.tar.gz
05:46:34 (4207): run_atlas exited; CPU time 56224.423581
05:46:34 (4207): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN