Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:23 (163901): wrapper (7.7.26015): starting
06:32:23 (163901): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 06:32:23] Arguments: --nthreads 12
[2025-07-26 06:32:23] Threads: 12
[2025-07-26 06:32:23] Checking for CVMFS
[2025-07-26 06:32:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:32:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:32:23] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:32:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:32:24] 2.13.0.0 842134 16808 355044 148774 1 64 30161049 32935937 11461 16776704 0 38472326 99.701 69744689 33042 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 06:32:24] CVMFS is ok
[2025-07-26 06:32:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:32:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:32:24] Further information can be found at the LHC@home message board.
[2025-07-26 06:32:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:32:24] Checking for apptainer binary...
[2025-07-26 06:32:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:32:24] Running /usr/bin/apptainer --version
[2025-07-26 06:32:24] apptainer version 1.4.1-1.el9
[2025-07-26 06:32:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:32:24] c6-5-37-2.aglt2.org
[2025-07-26 06:32:24] apptainer works
[2025-07-26 06:32:24] Set ATHENA_PROC_NUMBER=12
[2025-07-26 06:32:24] Set ATHENA_CORE_NUMBER=12
[2025-07-26 06:32:24] Starting ATLAS job with PandaID=6745093536
[2025-07-26 06:32:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 08:21:18]  *** The last 200 lines of the pilot log: ***
[2025-07-26 08:21:18] 2025-07-26 12:20:43,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,567 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 08:21:18] 2025-07-26 12:20:45,575 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2558.521107142857
[2025-07-26 08:21:18] 2025-07-26 12:20:45,585 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745093536/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,586 | INFO     | extracted standard info from prmon json
[2025-07-26 08:21:18] 2025-07-26 12:20:45,586 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 08:21:18] 2025-07-26 12:20:45,586 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 08:21:18] 2025-07-26 12:20:45,586 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 08:21:18] 2025-07-26 12:20:45,587 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 08:21:18] 2025-07-26 12:20:45,589 | INFO     | fitting pss+swap vs Time
[2025-07-26 08:21:18] 2025-07-26 12:20:45,589 | INFO     | sum of square deviations: 369339195.40566087
[2025-07-26 08:21:18] 2025-07-26 12:20:45,590 | INFO     | sum of deviations: -6361012934.867927
[2025-07-26 08:21:18] 2025-07-26 12:20:45,590 | INFO     | mean x: 1753529196.8773584
[2025-07-26 08:21:18] 2025-07-26 12:20:45,590 | INFO     | mean y: 2410452.4716981133
[2025-07-26 08:21:18] 2025-07-26 12:20:45,590 | INFO     | -- intersect: 30202892940.538776
[2025-07-26 08:21:18] 2025-07-26 12:20:45,590 | INFO     | intersect: 30202892940.538776
[2025-07-26 08:21:18] 2025-07-26 12:20:45,590 | INFO     | chi2: 1.7838921101984437
[2025-07-26 08:21:18] 2025-07-26 12:20:45,591 | INFO     | sum of square deviations: 319517902.1584155
[2025-07-26 08:21:18] 2025-07-26 12:20:45,591 | INFO     | sum of deviations: -3695212720.732674
[2025-07-26 08:21:18] 2025-07-26 12:20:45,591 | INFO     | mean x: 1753529044.3960395
[2025-07-26 08:21:18] 2025-07-26 12:20:45,591 | INFO     | mean y: 2418747.168316832
[2025-07-26 08:21:18] 2025-07-26 12:20:45,591 | INFO     | -- intersect: 20281917289.362263
[2025-07-26 08:21:18] 2025-07-26 12:20:45,591 | INFO     | intersect: 20281917289.362263
[2025-07-26 08:21:18] 2025-07-26 12:20:45,592 | INFO     | chi2: 1.7740682686146443
[2025-07-26 08:21:18] 2025-07-26 12:20:45,592 | INFO     | current chi2=1.7740682686146443 (change=0.5506970700546812 %)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,592 | INFO     | right removable region: 100
[2025-07-26 08:21:18] 2025-07-26 12:20:45,592 | INFO     | sum of square deviations: 319493502.1584155
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | sum of deviations: -22203579733.861374
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | mean x: 1753529349.3960395
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | mean y: 2458102.3465346536
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | -- intersect: 121866059277.17085
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | intersect: 121866059277.17085
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | chi2: 0.2637619121029585
[2025-07-26 08:21:18] 2025-07-26 12:20:45,593 | INFO     | current chi2=0.2637619121029585 (change=85.21424526769071 %)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,594 | INFO     | sum of square deviations: 274358014.9583326
[2025-07-26 08:21:18] 2025-07-26 12:20:45,594 | INFO     | sum of deviations: -20061733842.74998
[2025-07-26 08:21:18] 2025-07-26 12:20:45,594 | INFO     | mean x: 1753529501.8958333
[2025-07-26 08:21:18] 2025-07-26 12:20:45,594 | INFO     | mean y: 2450651.125
[2025-07-26 08:21:18] 2025-07-26 12:20:45,594 | INFO     | -- intersect: 128224847061.83984
[2025-07-26 08:21:18] 2025-07-26 12:20:45,594 | INFO     | intersect: 128224847061.83984
[2025-07-26 08:21:18] 2025-07-26 12:20:45,595 | INFO     | chi2: 0.2348278377189153
[2025-07-26 08:21:18] 2025-07-26 12:20:45,595 | INFO     | current chi2=0.2348278377189153 (change=10.96976972655131 %)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,595 | INFO     | left removable region: 20
[2025-07-26 08:21:18] 2025-07-26 12:20:45,595 | INFO     | sum of square deviations: 158780396.88749978
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | sum of deviations: -8997306328.587496
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | mean x: 1753529623.9625
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | mean y: 2428984.1375
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | -- intersect: 99366352316.7005
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | intersect: 99366352316.7005
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | chi2: 0.19758692071630593
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | -- intersect: 99366352316.7005
[2025-07-26 08:21:18] 2025-07-26 12:20:45,596 | INFO     | current memory leak: -56.67 B/s (using 80 data points, chi2=0.20)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | could have reported an average CPU frequency of 2596 MHz (7 samples)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | ..............................
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . Timing measurements:
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . get job = 0 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . initial setup = 3 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . payload setup = 9 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . stage-in = 0 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . payload execution = 6445 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,597 | INFO     | . stage-out = 0 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,598 | INFO     | . log creation = 0 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,598 | INFO     | ..............................
[2025-07-26 08:21:18] 2025-07-26 12:20:45,995 | INFO     | 
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | job summary report
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | --------------------------------------------------
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | PanDA job id: 6745093536
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | task id: 45743349
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | errors: (none)
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | pilot state: finished 
[2025-07-26 08:21:18] 2025-07-26 12:20:45,996 | INFO     | transexitcode: 0
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | exeerrorcode: 0
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | exeerrordiag: 
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | exitcode: 0
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | exitmsg: OK
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | cpuconsumptiontime: 48220 s
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | nevents: 400
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | neventsw: 0
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | pid: 174530
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | pgrp: 174530
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | corecount: 12
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | event service: False
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | sizes: {0: 2397303, 1: 2397502, 7: 2397764, 11: 2397792, 6459: 2424873, 6460: 2433871, 6461: 2434055, 6468: 2434249}
[2025-07-26 08:21:18] 2025-07-26 12:20:45,997 | INFO     | --------------------------------------------------
[2025-07-26 08:21:18] 2025-07-26 12:20:45,998 | INFO     | 
[2025-07-26 08:21:18] 2025-07-26 12:20:45,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 08:21:18] 2025-07-26 12:20:46,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,029 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 08:21:18] 2025-07-26 12:20:46,030 | INFO     | job 6745093536 has completed (purged errors)
[2025-07-26 08:21:18] 2025-07-26 12:20:46,031 | INFO     | overall cleanup function is called
[2025-07-26 08:21:18] 2025-07-26 12:20:47,039 | INFO     | --- collectZombieJob: --- 10, [174530]
[2025-07-26 08:21:18] 2025-07-26 12:20:47,040 | INFO     | zombie collector waiting for pid 174530
[2025-07-26 08:21:18] 2025-07-26 12:20:47,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 08:21:18] 2025-07-26 12:20:47,040 | INFO     | collected zombie processes
[2025-07-26 08:21:18] 2025-07-26 12:20:47,040 | INFO     | will attempt to kill all subprocesses of pid=174530
[2025-07-26 08:21:18] 2025-07-26 12:20:47,314 | INFO     | process IDs to be killed: [174530] (in reverse order)
[2025-07-26 08:21:18] 2025-07-26 12:20:47,458 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 08:21:18] 2025-07-26 12:20:47,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 08:21:18] 2025-07-26 12:20:47,472 | INFO     | did not find any defunct processes belonging to 174530
[2025-07-26 08:21:18] 2025-07-26 12:20:47,486 | INFO     | did not find any defunct processes belonging to 174530
[2025-07-26 08:21:18] 2025-07-26 12:20:47,486 | INFO     | ready for new job
[2025-07-26 08:21:18] 2025-07-26 12:20:47,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 08:21:18] 2025-07-26 12:20:47,488 | INFO     | ***************************************
[2025-07-26 08:21:18] 2025-07-26 12:20:47,488 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 08:21:18] 2025-07-26 12:20:47,488 | INFO     | ***************************************
[2025-07-26 08:21:18] 2025-07-26 12:20:47,489 | INFO     | 
[2025-07-26 08:21:18] 2025-07-26 12:20:47,492 | INFO     | architecture information:
[2025-07-26 08:21:18] 2025-07-26 12:20:47,493 | INFO     | executing command: cat /etc/os-release
[2025-07-26 08:21:18] 2025-07-26 12:20:47,512 | INFO     | cat /etc/os-release:
[2025-07-26 08:21:18] NAME="CentOS Linux"
[2025-07-26 08:21:18] VERSION="7 (Core)"
[2025-07-26 08:21:18] ID="centos"
[2025-07-26 08:21:18] ID_LIKE="rhel fedora"
[2025-07-26 08:21:18] VERSION_ID="7"
[2025-07-26 08:21:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 08:21:18] ANSI_COLOR="0;31"
[2025-07-26 08:21:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 08:21:18] HOME_URL="https://www.centos.org/"
[2025-07-26 08:21:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 08:21:18] 
[2025-07-26 08:21:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 08:21:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 08:21:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 08:21:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 08:21:18] 
[2025-07-26 08:21:18] 2025-07-26 12:20:47,512 | INFO     | ***************************************
[2025-07-26 08:21:18] 2025-07-26 12:20:48,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 08:21:18] 2025-07-26 12:20:48,033 | INFO     | sufficient remaining disk space (76365692928 B)
[2025-07-26 08:21:18] 2025-07-26 12:20:48,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 08:21:18] 2025-07-26 12:20:48,034 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 08:21:18] 2025-07-26 12:20:48,034 | INFO     | update_server=False
[2025-07-26 08:21:18] 2025-07-26 12:20:48,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 08:21:18] 2025-07-26 12:20:48,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 08:21:18] 2025-07-26 12:20:48,291 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 08:21:18] 2025-07-26 12:20:48,292 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 08:21:18] 2025-07-26 12:20:48,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 08:21:18] 2025-07-26 12:20:48,292 | INFO     | will abort loop
[2025-07-26 08:21:18] 2025-07-26 12:20:48,604 | INFO     | all job control threads have been joined
[2025-07-26 08:21:18] 2025-07-26 12:20:49,009 | INFO     | all data control threads have been joined
[2025-07-26 08:21:18] 2025-07-26 12:20:49,040 | INFO     | [job] retrieve thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:49,254 | INFO     | all payload control threads have been joined
[2025-07-26 08:21:18] 2025-07-26 12:20:49,296 | INFO     | [job] job monitor thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:49,503 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:49,573 | INFO     | [payload] failed_post thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:49,581 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:49,609 | INFO     | [job] control thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:49,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 08:21:18] 2025-07-26 12:20:50,015 | INFO     | [data] control thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,026 | INFO     | [data] copytool_in thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,174 | INFO     | [job] validate thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,193 | INFO     | [data] copytool_out thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,260 | INFO     | [payload] control thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,314 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,451 | INFO     | [payload] validate_post thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:50,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 08:21:18] 2025-07-26 12:20:51,704 | INFO     | [job] queue monitor thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:53,651 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:20:58,235 | INFO     | job.realtimelogging is not enabled
[2025-07-26 08:21:18] 2025-07-26 12:20:59,240 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 08:21:18] 2025-07-26 12:21:00,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264408708928)>', '<ExcThread(monitor, started 140263691380480)>']
[2025-07-26 08:21:18] 2025-07-26 12:21:05,723 | INFO     | all workflow threads have been joined
[2025-07-26 08:21:18] 2025-07-26 12:21:05,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 08:21:18] 2025-07-26 12:21:05,723 | INFO     | traces error code: 0
[2025-07-26 08:21:18] 2025-07-26 12:21:05,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 08:21:18] 2025-07-26 12:21:17,981 | INFO     | PID=167834 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 08:21:18] 2025-07-26 12:21:17,982 | INFO     | .. there are 14 such processes running
[2025-07-26 08:21:18] 2025-07-26 12:21:17,982 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 08:21:18] 2025-07-26 12:21:17,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 08:21:18] 2025-07-26 12:21:17,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 08:21:18] 2025-07-26 12:21:17,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 08:21:18] 2025-07-26 12:21:17,983 | INFO     | [monitor] control thread has ended
[2025-07-26 08:21:18] 2025-07-26 12:21:18,196 [wrapper] ==== pilot stdout END ====
[2025-07-26 08:21:18] 2025-07-26 12:21:18,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 08:21:18] 2025-07-26 12:21:18,210 [wrapper] pilotpid: 167834
[2025-07-26 08:21:18] 2025-07-26 12:21:18,214 [wrapper] Pilot exit status: 0
[2025-07-26 08:21:18] 2025-07-26 12:21:18,234 [wrapper] pandaids: 6745093536
[2025-07-26 08:21:18] 2025-07-26 12:21:18,308 [wrapper] cleanup supervisor_pilot  394533 167835
[2025-07-26 08:21:18] 2025-07-26 12:21:18,312 [wrapper] Test setup, not cleaning
[2025-07-26 08:21:18] 2025-07-26 12:21:18,317 [wrapper] apfmon messages muted
[2025-07-26 08:21:18] 2025-07-26 12:21:18,320 [wrapper] ==== wrapper stdout END ====
[2025-07-26 08:21:18] 2025-07-26 12:21:18,324 [wrapper] ==== wrapper stderr END ====
[2025-07-26 08:21:18]  *** Error codes and diagnostics ***
[2025-07-26 08:21:18]     "exeErrorCode": 0,
[2025-07-26 08:21:18]     "exeErrorDiag": "",
[2025-07-26 08:21:18]     "pilotErrorCode": 0,
[2025-07-26 08:21:18]     "pilotErrorDiag": "",
[2025-07-26 08:21:18]  *** Listing of results directory ***
[2025-07-26 08:21:18] total 434096
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 22:23 pilot3.tar.gz
[2025-07-26 08:21:18] -rwx------. 1 boincer umatlas     36292 Jul 25 22:23 runpilot2-wrapper.sh
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 22:23 queuedata.json
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas       100 Jul 26 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 08:21:18] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 06:32 run_atlas
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas       105 Jul 26 06:32 job.xml
[2025-07-26 08:21:18] -rw-r--r--. 2 boincer umatlas 232516832 Jul 26 06:32 EVNT.45743347._001710.pool.root.1
[2025-07-26 08:21:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:32 start_atlas.sh
[2025-07-26 08:21:18] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 06:32 shared
[2025-07-26 08:21:18] -rw-r--r--. 2 boincer umatlas    542887 Jul 26 06:32 input.tar.gz
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas         0 Jul 26 06:32 boinc_lockfile
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 06:32 pandaJob.out
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas    980133 Jul 26 06:32 agis_schedconf.cvmfs.json
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas   1593052 Jul 26 06:32 agis_ddmendpoints.agis.ALL.json
[2025-07-26 08:21:18] drwx------. 4 boincer umatlas      4096 Jul 26 06:32 pilot3
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas      6843 Jul 26 08:19 init_data.xml
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas 206154523 Jul 26 08:19 HITS.45743349._030673.pool.root.1
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas       530 Jul 26 08:19 boinc_task_state.xml
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas      1040 Jul 26 08:20 memory_monitor_summary.json
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas    389360 Jul 26 08:20 log.45743349._030673.job.log.tgz.1
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas        95 Jul 26 08:20 pilot_heartbeat.json
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas      7823 Jul 26 08:20 heartbeat.json
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 08:21 boinc_mmap_file
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas        27 Jul 26 08:21 wrapper_checkpoint.txt
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas       822 Jul 26 08:21 pilotlog.txt
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas    596822 Jul 26 08:21 log.45743349._030673.job.log.1
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas       357 Jul 26 08:21 output.list
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas       620 Jul 26 08:21 runtime_log
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas   1003520 Jul 26 08:21 result.tar.gz
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 08:21 runtime_log.err
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas       654 Jul 26 08:21 G2gLDmakjz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAyzKDmp2hsjn.diag
[2025-07-26 08:21:18] -rw-r--r--. 1 boincer umatlas     21172 Jul 26 08:21 stderr.txt
[2025-07-26 08:21:18] HITS file was successfully produced:
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas 206154523 Jul 26 08:19 shared/HITS.pool.root.1
[2025-07-26 08:21:18]  *** Contents of shared directory: ***
[2025-07-26 08:21:18] total 429924
[2025-07-26 08:21:18] -rw-r--r--. 2 boincer umatlas 232516832 Jul 26 06:32 ATLAS.root_0
[2025-07-26 08:21:18] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 06:32 start_atlas.sh
[2025-07-26 08:21:18] -rw-r--r--. 2 boincer umatlas    542887 Jul 26 06:32 input.tar.gz
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas 206154523 Jul 26 08:19 HITS.pool.root.1
[2025-07-26 08:21:18] -rw-------. 1 boincer umatlas   1003520 Jul 26 08:21 result.tar.gz
08:21:20 (163901): run_atlas exited; CPU time 48285.818914
08:21:20 (163901): called boinc_finish(0)

</stderr_txt>
]]>

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