Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
17:49:00 (3844497): wrapper (7.7.26015): starting
17:49:00 (3844497): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 17:49:00] Arguments: --nthreads 4
[2025-07-27 17:49:00] Threads: 4
[2025-07-27 17:49:00] Checking for CVMFS
[2025-07-27 17:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-27 17:49:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-27 17:49:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-27 17:49:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-27 17:49:00] 2.12.7.0 6878 7128 64668 148817 2 57 5159605 6144001 1836 130560 0 11848793 99.962 372258 1139 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-07-27 17:49:00] CVMFS is ok
[2025-07-27 17:49:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 17:49:00] Checking for apptainer binary...
[2025-07-27 17:49:00] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/bin:/var/lib/snapd/snap/bin)
[2025-07-27 17:49:00] apptainer is not installed, using version from CVMFS
[2025-07-27 17:49:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 17:49:01] Ryzen3
[2025-07-27 17:49:01] apptainer works
[2025-07-27 17:49:01] Set ATHENA_PROC_NUMBER=4
[2025-07-27 17:49:01] Set ATHENA_CORE_NUMBER=4
[2025-07-27 17:49:01] Starting ATLAS job with PandaID=6745069182
[2025-07-27 17:49:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 20:05:04]  *** The last 200 lines of the pilot log: ***
[2025-07-27 20:05:04] 2025-07-27 18:04:31,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,486 | INFO     | PID=3848127 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:05:04] 2025-07-27 18:04:32,486 | INFO     | .. there are 3 such processes running
[2025-07-27 20:05:04] 2025-07-27 18:04:32,832 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 20:05:04] 2025-07-27 18:04:32,834 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3967.0999166666666
[2025-07-27 20:05:04] 2025-07-27 18:04:32,836 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6745069182/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,836 | INFO     | extracted standard info from prmon json
[2025-07-27 20:05:04] 2025-07-27 18:04:32,836 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 20:05:04] 2025-07-27 18:04:32,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 20:05:04] 2025-07-27 18:04:32,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 20:05:04] 2025-07-27 18:04:32,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 20:05:04] 2025-07-27 18:04:32,838 | INFO     | fitting pss+swap vs Time
[2025-07-27 20:05:04] 2025-07-27 18:04:32,839 | INFO     | sum of square deviations: 729472282.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,839 | INFO     | sum of deviations: -15398868791.999998
[2025-07-27 20:05:04] 2025-07-27 18:04:32,839 | INFO     | mean x: 1753635397.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,839 | INFO     | mean y: 2413850.4135338347
[2025-07-27 20:05:04] 2025-07-27 18:04:32,839 | INFO     | -- intersect: 37020957328.683525
[2025-07-27 20:05:04] 2025-07-27 18:04:32,839 | INFO     | intersect: 37020957328.683525
[2025-07-27 20:05:04] 2025-07-27 18:04:32,840 | INFO     | chi2: 1.3149298629119148
[2025-07-27 20:05:04] 2025-07-27 18:04:32,840 | INFO     | sum of square deviations: 650252192.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,840 | INFO     | sum of deviations: -14568118606.5
[2025-07-27 20:05:04] 2025-07-27 18:04:32,840 | INFO     | mean x: 1753635244.5
[2025-07-27 20:05:04] 2025-07-27 18:04:32,840 | INFO     | mean y: 2415450.6328125
[2025-07-27 20:05:04] 2025-07-27 18:04:32,841 | INFO     | -- intersect: 39290504823.831924
[2025-07-27 20:05:04] 2025-07-27 18:04:32,841 | INFO     | intersect: 39290504823.831924
[2025-07-27 20:05:04] 2025-07-27 18:04:32,841 | INFO     | chi2: 1.309983459524318
[2025-07-27 20:05:04] 2025-07-27 18:04:32,841 | INFO     | current chi2=1.309983459524318 (change=0.37617241246943434 %)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,841 | INFO     | right removable region: 127
[2025-07-27 20:05:04] 2025-07-27 18:04:32,841 | INFO     | sum of square deviations: 650252192.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | sum of deviations: -24350968200.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | mean x: 1753635549.5
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | mean y: 2430404.484375
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | -- intersect: 65673448550.41632
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | intersect: 65673448550.41632
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | chi2: 0.24172461878850343
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | current chi2=0.24172461878850343 (change=81.61691922843673 %)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,842 | INFO     | sum of square deviations: 576985702.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | sum of deviations: -18578717723.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | mean x: 1753635702.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | mean y: 2418378.276422764
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | -- intersect: 56468813617.36148
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | intersect: 56468813617.36148
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | chi2: 0.22143829050384178
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | current chi2=0.22143829050384178 (change=8.39233024188204 %)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | left removable region: 20
[2025-07-27 20:05:04] 2025-07-27 18:04:32,843 | INFO     | sum of square deviations: 379832238.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | sum of deviations: -6078956098.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | mean x: 1753635824.0
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | mean y: 2390656.691588785
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | -- intersect: 28068136845.34463
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | intersect: 28068136845.34463
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | chi2: 0.12382091087547742
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | -- intersect: 28068136845.34463
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | current memory leak: -16.00 B/s (using 107 data points, chi2=0.12)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,844 | INFO     | could have reported an average CPU frequency of 3954 MHz (8 samples)
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | ..............................
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . Timing measurements:
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . get job = 0 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . initial setup = 1 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . payload setup = 4 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . stage-in = 0 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . payload execution = 8095 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . stage-out = 0 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | . log creation = 0 s
[2025-07-27 20:05:04] 2025-07-27 18:04:32,845 | INFO     | ..............................
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | 
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | job summary report
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | --------------------------------------------------
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | PanDA job id: 6745069182
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | task id: 45743349
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | errors: (none)
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | pilot state: finished 
[2025-07-27 20:05:04] 2025-07-27 18:04:33,055 | INFO     | transexitcode: 0
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | exeerrorcode: 0
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | exeerrordiag: 
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | exitcode: 0
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | exitmsg: OK
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | cpuconsumptiontime: 31354 s
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | nevents: 400
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | neventsw: 0
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | pid: 3854609
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | pgrp: 3854609
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | corecount: 4
[2025-07-27 20:05:04] 2025-07-27 18:04:33,056 | INFO     | event service: False
[2025-07-27 20:05:04] 2025-07-27 18:04:33,057 | INFO     | sizes: {0: 2397475, 3: 2397737, 11: 2397765, 8104: 2434649, 8107: 2434649, 8112: 2434843}
[2025-07-27 20:05:04] 2025-07-27 18:04:33,057 | INFO     | --------------------------------------------------
[2025-07-27 20:05:04] 2025-07-27 18:04:33,057 | INFO     | 
[2025-07-27 20:05:04] 2025-07-27 18:04:33,057 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 20:05:04] 2025-07-27 18:04:33,075 | INFO     | job 6745069182 has completed (purged errors)
[2025-07-27 20:05:04] 2025-07-27 18:04:33,076 | INFO     | overall cleanup function is called
[2025-07-27 20:05:04] 2025-07-27 18:04:34,082 | INFO     | --- collectZombieJob: --- 10, [3854609]
[2025-07-27 20:05:04] 2025-07-27 18:04:34,083 | INFO     | zombie collector waiting for pid 3854609
[2025-07-27 20:05:04] 2025-07-27 18:04:34,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 20:05:04] 2025-07-27 18:04:34,083 | INFO     | collected zombie processes
[2025-07-27 20:05:04] 2025-07-27 18:04:34,083 | INFO     | will attempt to kill all subprocesses of pid=3854609
[2025-07-27 20:05:04] 2025-07-27 18:04:34,157 | INFO     | process IDs to be killed: [3854609] (in reverse order)
[2025-07-27 20:05:04] 2025-07-27 18:04:34,202 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 20:05:04] 2025-07-27 18:04:34,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 20:05:04] 2025-07-27 18:04:34,205 | INFO     | did not find any defunct processes belonging to 3854609
[2025-07-27 20:05:04] 2025-07-27 18:04:34,208 | INFO     | did not find any defunct processes belonging to 3854609
[2025-07-27 20:05:04] 2025-07-27 18:04:34,208 | INFO     | ready for new job
[2025-07-27 20:05:04] 2025-07-27 18:04:34,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 20:05:04] 2025-07-27 18:04:34,209 | INFO     | ***************************************
[2025-07-27 20:05:04] 2025-07-27 18:04:34,209 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 20:05:04] 2025-07-27 18:04:34,210 | INFO     | ***************************************
[2025-07-27 20:05:04] 2025-07-27 18:04:34,210 | INFO     | 
[2025-07-27 20:05:04] 2025-07-27 18:04:34,210 | INFO     | architecture information:
[2025-07-27 20:05:04] 2025-07-27 18:04:34,211 | INFO     | executing command: cat /etc/os-release
[2025-07-27 20:05:04] 2025-07-27 18:04:34,221 | INFO     | cat /etc/os-release:
[2025-07-27 20:05:04] NAME="CentOS Linux"
[2025-07-27 20:05:04] VERSION="7 (Core)"
[2025-07-27 20:05:04] ID="centos"
[2025-07-27 20:05:04] ID_LIKE="rhel fedora"
[2025-07-27 20:05:04] VERSION_ID="7"
[2025-07-27 20:05:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 20:05:04] ANSI_COLOR="0;31"
[2025-07-27 20:05:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 20:05:04] HOME_URL="https://www.centos.org/"
[2025-07-27 20:05:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 20:05:04] 
[2025-07-27 20:05:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 20:05:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 20:05:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 20:05:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 20:05:04] 
[2025-07-27 20:05:04] 2025-07-27 18:04:34,221 | INFO     | ***************************************
[2025-07-27 20:05:04] 2025-07-27 18:04:34,722 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-27 20:05:04] 2025-07-27 18:04:34,736 | INFO     | sufficient remaining disk space (193548255232 B)
[2025-07-27 20:05:04] 2025-07-27 18:04:34,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 20:05:04] 2025-07-27 18:04:34,736 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 20:05:04] 2025-07-27 18:04:34,736 | INFO     | update_server=False
[2025-07-27 20:05:04] 2025-07-27 18:04:34,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 20:05:04] 2025-07-27 18:04:34,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 20:05:04] 2025-07-27 18:04:34,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:05:04] 2025-07-27 18:04:35,252 | INFO     | all data control threads have been joined
[2025-07-27 20:05:04] 2025-07-27 18:04:35,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 20:05:04] 2025-07-27 18:04:35,496 | INFO     | aborting loop
[2025-07-27 20:05:04] 2025-07-27 18:04:35,529 | INFO     | all payload control threads have been joined
[2025-07-27 20:05:04] 2025-07-27 18:04:35,739 | INFO     | [job] queue monitor thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:35,742 | INFO     | [job] retrieve thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:35,742 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:35,836 | INFO     | [data] copytool_in thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:36,125 | INFO     | all job control threads have been joined
[2025-07-27 20:05:04] 2025-07-27 18:04:36,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 20:05:04] 2025-07-27 18:04:36,256 | INFO     | [data] control thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:36,359 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:36,501 | INFO     | [job] job monitor thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:36,532 | INFO     | [payload] control thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:36,685 | INFO     | [payload] failed_post thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:37,076 | INFO     | [job] validate thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:37,130 | INFO     | [job] control thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:37,196 | INFO     | [payload] validate_post thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:37,226 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:38,226 | INFO     | [data] copytool_out thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:38,742 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:45,357 | INFO     | job.realtimelogging is not enabled
[2025-07-27 20:05:04] 2025-07-27 18:04:46,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 20:05:04] 2025-07-27 18:04:46,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037861402432)>', '<ExcThread(monitor, started 140037324789504)>']
[2025-07-27 20:05:04] 2025-07-27 18:04:51,863 | INFO     | all workflow threads have been joined
[2025-07-27 20:05:04] 2025-07-27 18:04:51,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 20:05:04] 2025-07-27 18:04:51,863 | INFO     | traces error code: 0
[2025-07-27 20:05:04] 2025-07-27 18:04:51,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 20:05:04] 2025-07-27 18:05:04,635 | INFO     | PID=3848127 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 20:05:04] 2025-07-27 18:05:04,636 | INFO     | .. there are 3 such processes running
[2025-07-27 20:05:04] 2025-07-27 18:05:04,636 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 20:05:04] 2025-07-27 18:05:04,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 20:05:04] 2025-07-27 18:05:04,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 20:05:04] 2025-07-27 18:05:04,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 20:05:04] 2025-07-27 18:05:04,636 | INFO     | [monitor] control thread has ended
[2025-07-27 20:05:04] 2025-07-27 18:05:04,721 [wrapper] ==== pilot stdout END ====
[2025-07-27 20:05:04] 2025-07-27 18:05:04,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 20:05:04] 2025-07-27 18:05:04,725 [wrapper] pilotpid: 3848127
[2025-07-27 20:05:04] 2025-07-27 18:05:04,726 [wrapper] Pilot exit status: 0
[2025-07-27 20:05:04] 2025-07-27 18:05:04,735 [wrapper] pandaids: 6745069182
[2025-07-27 20:05:04] 2025-07-27 18:05:04,758 [wrapper] cleanup supervisor_pilot 3926404 3848128
[2025-07-27 20:05:04] 2025-07-27 18:05:04,760 [wrapper] Test setup, not cleaning
[2025-07-27 20:05:04] 2025-07-27 18:05:04,763 [wrapper] apfmon messages muted
[2025-07-27 20:05:04] 2025-07-27 18:05:04,765 [wrapper] ==== wrapper stdout END ====
[2025-07-27 20:05:04] 2025-07-27 18:05:04,767 [wrapper] ==== wrapper stderr END ====
[2025-07-27 20:05:04]  *** Error codes and diagnostics ***
[2025-07-27 20:05:04]     "exeErrorCode": 0,
[2025-07-27 20:05:04]     "exeErrorDiag": "",
[2025-07-27 20:05:04]     "pilotErrorCode": 0,
[2025-07-27 20:05:04]     "pilotErrorDiag": "",
[2025-07-27 20:05:04]  *** Listing of results directory ***
[2025-07-27 20:05:04] insgesamt 351652
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc    530466 26. Jul 03:05 pilot3.tar.gz
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc      5112 26. Jul 03:30 queuedata.json
[2025-07-27 20:05:04] -rwx------ 1 boinc boinc     36292 26. Jul 03:30 runpilot2-wrapper.sh
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc       100 27. Jul 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 20:05:04] -rwxr-xr-x 1 boinc boinc      7986 27. Jul 17:48 run_atlas
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc       105 27. Jul 17:48 job.xml
[2025-07-27 20:05:04] -rw-r--r-- 2 boinc boinc     15095 27. Jul 17:49 start_atlas.sh
[2025-07-27 20:05:04] drwxrwx--x 2 boinc boinc      4096 27. Jul 17:49 shared
[2025-07-27 20:05:04] -rw-r--r-- 2 boinc boinc    542895 27. Jul 17:49 input.tar.gz
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc      6873 27. Jul 17:49 init_data.xml
[2025-07-27 20:05:04] -rw-r--r-- 2 boinc boinc 147130810 27. Jul 17:49 EVNT.45743347._001685.pool.root.1
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc         0 27. Jul 17:49 boinc_lockfile
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc      2563 27. Jul 17:49 pandaJob.out
[2025-07-27 20:05:04] -rw------- 1 boinc boinc    980101 27. Jul 17:49 agis_schedconf.cvmfs.json
[2025-07-27 20:05:04] -rw------- 1 boinc boinc   1593052 27. Jul 17:49 agis_ddmendpoints.agis.ALL.json
[2025-07-27 20:05:04] drwx------ 4 boinc boinc      4096 27. Jul 17:49 pilot3
[2025-07-27 20:05:04] -rw------- 1 boinc boinc 206968383 27. Jul 20:03 HITS.45743349._030110.pool.root.1
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc       529 27. Jul 20:04 boinc_task_state.xml
[2025-07-27 20:05:04] -rw------- 1 boinc boinc        95 27. Jul 20:04 pilot_heartbeat.json
[2025-07-27 20:05:04] -rw------- 1 boinc boinc      1014 27. Jul 20:04 memory_monitor_summary.json
[2025-07-27 20:05:04] -rw------- 1 boinc boinc    280053 27. Jul 20:04 log.45743349._030110.job.log.tgz.1
[2025-07-27 20:05:04] -rw------- 1 boinc boinc      7721 27. Jul 20:04 heartbeat.json
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc      8192 27. Jul 20:04 boinc_mmap_file
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc        27 27. Jul 20:04 wrapper_checkpoint.txt
[2025-07-27 20:05:04] -rw------- 1 boinc boinc       822 27. Jul 20:05 pilotlog.txt
[2025-07-27 20:05:04] -rw------- 1 boinc boinc    777826 27. Jul 20:05 log.45743349._030110.job.log.1
[2025-07-27 20:05:04] -rw------- 1 boinc boinc       357 27. Jul 20:05 output.list
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc       620 27. Jul 20:05 runtime_log
[2025-07-27 20:05:04] -rw------- 1 boinc boinc   1075200 27. Jul 20:05 result.tar.gz
[2025-07-27 20:05:04] -rw------- 1 boinc boinc       643 27. Jul 20:05 v5vMDmyuiz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwwQLDmvFwKnn.diag
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc      8612 27. Jul 20:05 runtime_log.err
[2025-07-27 20:05:04] -rw-r--r-- 1 boinc boinc     20972 27. Jul 20:05 stderr.txt
[2025-07-27 20:05:04] HITS file was successfully produced:
[2025-07-27 20:05:04] -rw------- 1 boinc boinc 206968383 27. Jul 20:03 shared/HITS.pool.root.1
[2025-07-27 20:05:04]  *** Contents of shared directory: ***
[2025-07-27 20:05:04] insgesamt 347412
[2025-07-27 20:05:04] -rw-r--r-- 2 boinc boinc     15095 27. Jul 17:49 start_atlas.sh
[2025-07-27 20:05:04] -rw-r--r-- 2 boinc boinc    542895 27. Jul 17:49 input.tar.gz
[2025-07-27 20:05:04] -rw-r--r-- 2 boinc boinc 147130810 27. Jul 17:49 ATLAS.root_0
[2025-07-27 20:05:04] -rw------- 1 boinc boinc 206968383 27. Jul 20:03 HITS.pool.root.1
[2025-07-27 20:05:04] -rw------- 1 boinc boinc   1075200 27. Jul 20:05 result.tar.gz
20:05:06 (3844497): run_atlas exited; CPU time 31416.823653
20:05:06 (3844497): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN