Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:04:09 (1683308): wrapper (7.7.26015): starting
04:04:09 (1683308): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 04:04:09] Arguments: --nthreads 8
[2025-07-26 04:04:09] Threads: 8
[2025-07-26 04:04:09] Checking for CVMFS
[2025-07-26 04:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 04:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 04:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 04:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 04:04:10] 2.13.1.0 116762 6689 203512 148768 0 188 34484961 40960001 13722 16776704 0 88248140 99.998 268090 35985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 04:04:10] CVMFS is ok
[2025-07-26 04:04:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 04:04:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 04:04:10] Further information can be found at the LHC@home message board.
[2025-07-26 04:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 04:04:10] Checking for apptainer binary...
[2025-07-26 04:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 04:04:10] Running /usr/bin/apptainer --version
[2025-07-26 04:04:10] apptainer version 1.4.1-1.el9
[2025-07-26 04:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 04:04:10] c-208-39.aglt2.org
[2025-07-26 04:04:10] apptainer works
[2025-07-26 04:04:10] Set ATHENA_PROC_NUMBER=8
[2025-07-26 04:04:10] Set ATHENA_CORE_NUMBER=8
[2025-07-26 04:04:10] Starting ATLAS job with PandaID=6745093189
[2025-07-26 04:04:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:00:35]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:00:35]  protocol_id=None
[2025-07-26 05:00:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 05:00:35]  replicas=None
[2025-07-26 05:00:35]  scope=mc23_13p6TeV
[2025-07-26 05:00:35]  status=None
[2025-07-26 05:00:35]  status_code=0
[2025-07-26 05:00:35]  storage_token=
[2025-07-26 05:00:35]  surl=/tmp/boinchome/slots/10/PanDA_Pilot-6745093189/log.45743349._030402.job.log.tgz.1
[2025-07-26 05:00:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/8a/log.45743349._030402.job.log.tgz.1
[2025-07-26 05:00:35]  workdir=None
[2025-07-26 05:00:35] ]
[2025-07-26 05:00:35] 2025-07-26 08:59:55,264 | INFO     | transferring file log.45743349._030402.job.log.tgz.1 from /tmp/boinchome/slots/10/PanDA_Pilot-6745093189/log.45743349._030402.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-26 05:00:35] 2025-07-26 08:59:55,264 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/10/PanDA_Pilot-6745093189/log.45743349._030402.job.log.tgz.1 /tmp/boinchome/slots/10/log.45743349._030402.j
[2025-07-26 05:00:35] 2025-07-26 08:59:55,280 | INFO     | adding to output.list: log.45743349._030402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/8a/log.45743349._030402.job.log.tg
[2025-07-26 05:00:35] 2025-07-26 08:59:55,280 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 05:00:35] 2025-07-26 08:59:55,281 | INFO     | summary of transferred files:
[2025-07-26 05:00:35] 2025-07-26 08:59:55,281 | INFO     |  -- lfn=log.45743349._030402.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 05:00:35] 2025-07-26 08:59:55,281 | INFO     | stage-out finished correctly
[2025-07-26 05:00:35] 2025-07-26 08:59:56,868 | INFO     | monitor loop #245: job 0:6745093189 is in state 'finished'
[2025-07-26 05:00:35] 2025-07-26 08:59:56,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:00:35] 2025-07-26 08:59:58,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 05:00:35] 2025-07-26 08:59:58,704 | INFO     | job 6745093189 has state=finished
[2025-07-26 05:00:35] 2025-07-26 08:59:58,704 | INFO     | preparing for final server update for job 6745093189 in state='finished'
[2025-07-26 05:00:35] 2025-07-26 08:59:58,704 | INFO     | this job has now completed (state=finished)
[2025-07-26 05:00:35] 2025-07-26 08:59:58,704 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 05:00:35] 2025-07-26 08:59:58,705 | INFO     | log transfer has been attempted: DONE
[2025-07-26 05:00:35] 2025-07-26 08:59:58,705 | INFO     | job 6745093189 has finished - writing final server update
[2025-07-26 05:00:35] 2025-07-26 08:59:58,705 | INFO     | total number of processed events: 400 (read)
[2025-07-26 05:00:35] 2025-07-26 08:59:58,705 | INFO     | executing command: lscpu
[2025-07-26 05:00:35] 2025-07-26 08:59:58,757 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 05:00:35] 2025-07-26 08:59:59,371 | INFO     | monitor loop #246: job 0:6745093189 is in state 'finished'
[2025-07-26 05:00:35] 2025-07-26 08:59:59,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:00:35] 2025-07-26 09:00:01,874 | INFO     | monitor loop #247: job 0:6745093189 is in state 'finished'
[2025-07-26 05:00:35] 2025-07-26 09:00:01,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,333 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 05:00:35] 2025-07-26 09:00:02,338 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3744.1440625000014
[2025-07-26 05:00:35] 2025-07-26 09:00:02,352 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6745093189/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,353 | INFO     | extracted standard info from prmon json
[2025-07-26 05:00:35] 2025-07-26 09:00:02,353 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:00:35] 2025-07-26 09:00:02,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:00:35] 2025-07-26 09:00:02,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:00:35] 2025-07-26 09:00:02,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:00:35] 2025-07-26 09:00:02,354 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:00:35] 2025-07-26 09:00:02,354 | INFO     | sum of square deviations: 34277852.0
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | sum of deviations: 216062030.4999999
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | mean x: 1753518820.5
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | mean y: 2519072.1041666665
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | -- intersect: -11050356612.089664
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | intersect: -11050356612.089664
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | chi2: 0.0003179254052834969
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | -- intersect: -11050356612.089664
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | current memory leak: 6.30 B/s (using 48 data points, chi2=0.00)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | could have reported an average CPU frequency of 3768 MHz (5 samples)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | ..............................
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | . Timing measurements:
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | . get job = 0 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | . initial setup = 2 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | . payload setup = 5 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | . stage-in = 0 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,355 | INFO     | . payload execution = 3313 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,356 | INFO     | . stage-out = 0 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,356 | INFO     | . log creation = 0 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,356 | INFO     | ..............................
[2025-07-26 05:00:35] 2025-07-26 09:00:02,413 | INFO     | 
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | job summary report
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | --------------------------------------------------
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | PanDA job id: 6745093189
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | task id: 45743349
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | errors: (none)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | pilot state: finished 
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | transexitcode: 0
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | exeerrorcode: 0
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | exeerrordiag: 
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | exitcode: 0
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | exitmsg: OK
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | cpuconsumptiontime: 24862 s
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | nevents: 400
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | neventsw: 0
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | pid: 1693399
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | pgrp: 1693399
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | corecount: 8
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | event service: False
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | sizes: {0: 2397476, 3: 2397738, 11: 2397766, 3322: 2432447, 3326: 2432447, 3330: 2432673}
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | --------------------------------------------------
[2025-07-26 05:00:35] 2025-07-26 09:00:02,414 | INFO     | 
[2025-07-26 05:00:35] 2025-07-26 09:00:02,415 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | job 6745093189 has completed (purged errors)
[2025-07-26 05:00:35] 2025-07-26 09:00:02,433 | INFO     | overall cleanup function is called
[2025-07-26 05:00:35] 2025-07-26 09:00:03,049 | INFO     | PID=1686908 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 05:00:35] 2025-07-26 09:00:03,050 | INFO     | .. there are 15 such processes running
[2025-07-26 05:00:35] 2025-07-26 09:00:03,441 | INFO     | --- collectZombieJob: --- 10, [1693399]
[2025-07-26 05:00:35] 2025-07-26 09:00:03,441 | INFO     | zombie collector waiting for pid 1693399
[2025-07-26 05:00:35] 2025-07-26 09:00:03,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:00:35] 2025-07-26 09:00:03,441 | INFO     | collected zombie processes
[2025-07-26 05:00:35] 2025-07-26 09:00:03,441 | INFO     | will attempt to kill all subprocesses of pid=1693399
[2025-07-26 05:00:35] 2025-07-26 09:00:03,773 | INFO     | process IDs to be killed: [1693399] (in reverse order)
[2025-07-26 05:00:35] 2025-07-26 09:00:03,887 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:00:35] 2025-07-26 09:00:03,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:00:35] 2025-07-26 09:00:03,904 | INFO     | did not find any defunct processes belonging to 1693399
[2025-07-26 05:00:35] 2025-07-26 09:00:03,916 | INFO     | did not find any defunct processes belonging to 1693399
[2025-07-26 05:00:35] 2025-07-26 09:00:03,916 | INFO     | ready for new job
[2025-07-26 05:00:35] 2025-07-26 09:00:03,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:00:35] 2025-07-26 09:00:03,917 | INFO     | ***************************************
[2025-07-26 05:00:35] 2025-07-26 09:00:03,917 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:00:35] 2025-07-26 09:00:03,917 | INFO     | ***************************************
[2025-07-26 05:00:35] 2025-07-26 09:00:03,917 | INFO     | 
[2025-07-26 05:00:35] 2025-07-26 09:00:03,922 | INFO     | architecture information:
[2025-07-26 05:00:35] 2025-07-26 09:00:03,922 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:00:35] 2025-07-26 09:00:03,937 | INFO     | cat /etc/os-release:
[2025-07-26 05:00:35] NAME="CentOS Linux"
[2025-07-26 05:00:35] VERSION="7 (Core)"
[2025-07-26 05:00:35] ID="centos"
[2025-07-26 05:00:35] ID_LIKE="rhel fedora"
[2025-07-26 05:00:35] VERSION_ID="7"
[2025-07-26 05:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:00:35] ANSI_COLOR="0;31"
[2025-07-26 05:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:00:35] HOME_URL="https://www.centos.org/"
[2025-07-26 05:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:00:35] 
[2025-07-26 05:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:00:35] 
[2025-07-26 05:00:35] 2025-07-26 09:00:03,937 | INFO     | ***************************************
[2025-07-26 05:00:35] 2025-07-26 09:00:04,440 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-07-26 05:00:35] 2025-07-26 09:00:04,454 | INFO     | sufficient remaining disk space (166656475136 B)
[2025-07-26 05:00:35] 2025-07-26 09:00:04,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:00:35] 2025-07-26 09:00:04,454 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:00:35] 2025-07-26 09:00:04,454 | INFO     | update_server=False
[2025-07-26 05:00:35] 2025-07-26 09:00:04,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:00:35] 2025-07-26 09:00:04,595 | INFO     | all data control threads have been joined
[2025-07-26 05:00:35] 2025-07-26 09:00:04,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:00:35] 2025-07-26 09:00:04,764 | INFO     | all payload control threads have been joined
[2025-07-26 05:00:35] 2025-07-26 09:00:05,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:00:35] 2025-07-26 09:00:05,380 | INFO     | aborting loop
[2025-07-26 05:00:35] 2025-07-26 09:00:05,459 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,463 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,524 | INFO     | all job control threads have been joined
[2025-07-26 05:00:35] 2025-07-26 09:00:05,570 | INFO     | [job] validate thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,596 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,600 | INFO     | [data] control thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,678 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,769 | INFO     | [payload] control thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:05,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:00:35] 2025-07-26 09:00:06,031 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:06,202 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:06,312 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:06,383 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:06,529 | INFO     | [job] control thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:07,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:00:35] 2025-07-26 09:00:07,854 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:08,422 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:08,714 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:14,845 | INFO     | job.realtimelogging is not enabled
[2025-07-26 05:00:35] 2025-07-26 09:00:15,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:00:35] 2025-07-26 09:00:17,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705750304576)>', '<ExcThread(monitor, started 139705261737728)>']
[2025-07-26 05:00:35] 2025-07-26 09:00:22,493 | INFO     | all workflow threads have been joined
[2025-07-26 05:00:35] 2025-07-26 09:00:22,494 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:00:35] 2025-07-26 09:00:22,494 | INFO     | traces error code: 0
[2025-07-26 05:00:35] 2025-07-26 09:00:22,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:00:35] 2025-07-26 09:00:35,524 | INFO     | PID=1686908 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:00:35] 2025-07-26 09:00:35,524 | INFO     | .. there are 15 such processes running
[2025-07-26 05:00:35] 2025-07-26 09:00:35,525 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:00:35] 2025-07-26 09:00:35,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:00:35] 2025-07-26 09:00:35,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:00:35] 2025-07-26 09:00:35,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:00:35] 2025-07-26 09:00:35,525 | INFO     | [monitor] control thread has ended
[2025-07-26 05:00:35] 2025-07-26 09:00:35,599 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:00:35] 2025-07-26 09:00:35,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:00:35] 2025-07-26 09:00:35,604 [wrapper] pilotpid: 1686908
[2025-07-26 05:00:35] 2025-07-26 09:00:35,606 [wrapper] Pilot exit status: 0
[2025-07-26 05:00:35] 2025-07-26 09:00:35,616 [wrapper] pandaids: 6745093189
[2025-07-26 05:00:35] 2025-07-26 09:00:35,702 [wrapper] cleanup supervisor_pilot 2010376 1686909
[2025-07-26 05:00:35] 2025-07-26 09:00:35,705 [wrapper] Test setup, not cleaning
[2025-07-26 05:00:35] 2025-07-26 09:00:35,710 [wrapper] apfmon messages muted
[2025-07-26 05:00:35] 2025-07-26 09:00:35,713 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:00:35] 2025-07-26 09:00:35,715 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:00:35]  *** Error codes and diagnostics ***
[2025-07-26 05:00:35]     "exeErrorCode": 0,
[2025-07-26 05:00:35]     "exeErrorDiag": "",
[2025-07-26 05:00:35]     "pilotErrorCode": 0,
[2025-07-26 05:00:35]     "pilotErrorDiag": "",
[2025-07-26 05:00:35]  *** Listing of results directory ***
[2025-07-26 05:00:35] total 430068
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 21:05 pilot3.tar.gz
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 21:49 queuedata.json
[2025-07-26 05:00:35] -rwx------. 1 boincer umatlas     36292 Jul 25 21:49 runpilot2-wrapper.sh
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas       100 Jul 26 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:00:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 04:04 run_atlas
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas       105 Jul 26 04:04 job.xml
[2025-07-26 05:00:35] -rw-r--r--. 2 boincer umatlas 227371958 Jul 26 04:04 EVNT.45743347._001699.pool.root.1
[2025-07-26 05:00:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 04:04 start_atlas.sh
[2025-07-26 05:00:35] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 04:04 shared
[2025-07-26 05:00:35] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 04:04 input.tar.gz
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas         0 Jul 26 04:04 boinc_lockfile
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 04:04 pandaJob.out
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas    980017 Jul 26 04:04 agis_schedconf.cvmfs.json
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas   1593052 Jul 26 04:04 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:00:35] drwx------. 4 boincer umatlas      4096 Jul 26 04:04 pilot3
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas      7175 Jul 26 04:55 init_data.xml
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas       529 Jul 26 04:59 boinc_task_state.xml
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas 207851050 Jul 26 04:59 HITS.45743349._030402.pool.root.1
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas      1027 Jul 26 04:59 memory_monitor_summary.json
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas    300595 Jul 26 04:59 log.45743349._030402.job.log.tgz.1
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas      7764 Jul 26 05:00 heartbeat.json
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 05:00 boinc_mmap_file
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas        27 Jul 26 05:00 wrapper_checkpoint.txt
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas        95 Jul 26 05:00 pilot_heartbeat.json
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas       823 Jul 26 05:00 pilotlog.txt
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas    344583 Jul 26 05:00 log.45743349._030402.job.log.1
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas       357 Jul 26 05:00 output.list
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas       620 Jul 26 05:00 runtime_log
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas    665600 Jul 26 05:00 result.tar.gz
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas      8674 Jul 26 05:00 runtime_log.err
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas       651 Jul 26 05:00 1ebLDm1Djz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfzQLDmbPzYVm.diag
[2025-07-26 05:00:35] -rw-r--r--. 1 boincer umatlas     21879 Jul 26 05:00 stderr.txt
[2025-07-26 05:00:35] HITS file was successfully produced:
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas 207851050 Jul 26 04:59 shared/HITS.pool.root.1
[2025-07-26 05:00:35]  *** Contents of shared directory: ***
[2025-07-26 05:00:35] total 426228
[2025-07-26 05:00:35] -rw-r--r--. 2 boincer umatlas 227371958 Jul 26 04:04 ATLAS.root_0
[2025-07-26 05:00:35] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 04:04 start_atlas.sh
[2025-07-26 05:00:35] -rw-r--r--. 2 boincer umatlas    542898 Jul 26 04:04 input.tar.gz
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas 207851050 Jul 26 04:59 HITS.pool.root.1
[2025-07-26 05:00:35] -rw-------. 1 boincer umatlas    665600 Jul 26 05:00 result.tar.gz
05:00:36 (1683308): run_atlas exited; CPU time 24944.994824
05:00:36 (1683308): called boinc_finish(0)

</stderr_txt>
]]>

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