Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:25:34 (811213): wrapper (7.7.26015): starting
04:25:34 (811213): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 04:25:34] Arguments: --nthreads 8
[2025-07-26 04:25:34] Threads: 8
[2025-07-26 04:25:34] Checking for CVMFS
[2025-07-26 04:25:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 04:25:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 04:25:34] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 04:25:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 04:25:35] 2.13.1.0 5062 256 77200 148769 3 57 1702593 40960000 6412 16776704 0 1554767 99.998 7908 47638 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 04:25:35] CVMFS is ok
[2025-07-26 04:25:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 04:25:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 04:25:35] Further information can be found at the LHC@home message board.
[2025-07-26 04:25:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 04:25:35] Checking for apptainer binary...
[2025-07-26 04:25:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 04:25:35] Running /usr/bin/apptainer --version
[2025-07-26 04:25:35] apptainer version 1.4.1-1.el9
[2025-07-26 04:25:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 04:25:35] c-206-40.aglt2.org
[2025-07-26 04:25:35] apptainer works
[2025-07-26 04:25:35] Set ATHENA_PROC_NUMBER=8
[2025-07-26 04:25:35] Set ATHENA_CORE_NUMBER=8
[2025-07-26 04:25:35] Starting ATLAS job with PandaID=6745093217
[2025-07-26 04:25:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:47:03]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:47:03]  is_tar=False
[2025-07-26 05:47:03]  lfn=log.45743349._030430.job.log.tgz.1
[2025-07-26 05:47:03]  mtime=0
[2025-07-26 05:47:03]  protocol_id=None
[2025-07-26 05:47:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 05:47:03]  replicas=None
[2025-07-26 05:47:03]  scope=mc23_13p6TeV
[2025-07-26 05:47:03]  status=None
[2025-07-26 05:47:03]  status_code=0
[2025-07-26 05:47:03]  storage_token=
[2025-07-26 05:47:03]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6745093217/log.45743349._030430.job.log.tgz.1
[2025-07-26 05:47:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/03/log.45743349._030430.job.log.tgz.1
[2025-07-26 05:47:03]  workdir=None
[2025-07-26 05:47:03] ]
[2025-07-26 05:47:03] 2025-07-26 09:46:23,835 | INFO     | transferring file log.45743349._030430.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6745093217/log.45743349._030430.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 05:47:03] 2025-07-26 09:46:23,835 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6745093217/log.45743349._030430.job.log.tgz.1 /tmp/boinchome/slots/3/log.45743349._030430.job
[2025-07-26 05:47:03] 2025-07-26 09:46:23,858 | INFO     | adding to output.list: log.45743349._030430.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/03/log.45743349._030430.job.log.tg
[2025-07-26 05:47:03] 2025-07-26 09:46:23,859 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 05:47:03] 2025-07-26 09:46:23,859 | INFO     | summary of transferred files:
[2025-07-26 05:47:03] 2025-07-26 09:46:23,859 | INFO     |  -- lfn=log.45743349._030430.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 05:47:03] 2025-07-26 09:46:23,859 | INFO     | stage-out finished correctly
[2025-07-26 05:47:03] 2025-07-26 09:46:24,723 | INFO     | PID=815598 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:47:03] 2025-07-26 09:46:24,724 | INFO     | .. there are 8 such processes running
[2025-07-26 05:47:03] 2025-07-26 09:46:25,586 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 05:47:03] 2025-07-26 09:46:25,667 | INFO     | job 6745093217 has state=finished
[2025-07-26 05:47:03] 2025-07-26 09:46:25,667 | INFO     | preparing for final server update for job 6745093217 in state='finished'
[2025-07-26 05:47:03] 2025-07-26 09:46:25,668 | INFO     | this job has now completed (state=finished)
[2025-07-26 05:47:03] 2025-07-26 09:46:25,668 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 05:47:03] 2025-07-26 09:46:25,668 | INFO     | log transfer has been attempted: DONE
[2025-07-26 05:47:03] 2025-07-26 09:46:25,668 | INFO     | job 6745093217 has finished - writing final server update
[2025-07-26 05:47:03] 2025-07-26 09:46:25,669 | INFO     | total number of processed events: 400 (read)
[2025-07-26 05:47:03] 2025-07-26 09:46:25,669 | INFO     | executing command: lscpu
[2025-07-26 05:47:03] 2025-07-26 09:46:25,721 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 05:47:03] 2025-07-26 09:46:25,784 | INFO     | monitor loop #347: job 0:6745093217 is in state 'finished'
[2025-07-26 05:47:03] 2025-07-26 09:46:25,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:47:03] 2025-07-26 09:46:28,287 | INFO     | monitor loop #348: job 0:6745093217 is in state 'finished'
[2025-07-26 05:47:03] 2025-07-26 09:46:28,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:47:03] 2025-07-26 09:46:29,932 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 05:47:03] 2025-07-26 09:46:29,936 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3266.8969843749987
[2025-07-26 05:47:03] 2025-07-26 09:46:29,946 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6745093217/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:47:03] 2025-07-26 09:46:29,947 | INFO     | extracted standard info from prmon json
[2025-07-26 05:47:03] 2025-07-26 09:46:29,947 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:47:03] 2025-07-26 09:46:29,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:47:03] 2025-07-26 09:46:29,948 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:47:03] 2025-07-26 09:46:29,948 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:47:03] 2025-07-26 09:46:29,950 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:47:03] 2025-07-26 09:46:29,950 | INFO     | sum of square deviations: 115715658.0
[2025-07-26 05:47:03] 2025-07-26 09:46:29,950 | INFO     | sum of deviations: -439573045.4999999
[2025-07-26 05:47:03] 2025-07-26 09:46:29,950 | INFO     | mean x: 1753520842.5
[2025-07-26 05:47:03] 2025-07-26 09:46:29,950 | INFO     | mean y: 2533418.013888889
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | -- intersect: 6663693285.293481
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | intersect: 6663693285.293481
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | chi2: 0.0023237721970758227
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | -- intersect: 6663693285.293481
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | current memory leak: -3.80 B/s (using 72 data points, chi2=0.00)
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | could have reported an average CPU frequency of 3278 MHz (6 samples)
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | ..............................
[2025-07-26 05:47:03] 2025-07-26 09:46:29,951 | INFO     | . Timing measurements:
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . get job = 0 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . initial setup = 2 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . payload setup = 6 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . stage-in = 0 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . payload execution = 4811 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . stage-out = 0 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | . log creation = 0 s
[2025-07-26 05:47:03] 2025-07-26 09:46:29,952 | INFO     | ..............................
[2025-07-26 05:47:03] 2025-07-26 09:46:30,036 | INFO     | 
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | job summary report
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | --------------------------------------------------
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | PanDA job id: 6745093217
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | task id: 45743349
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | errors: (none)
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | pilot state: finished 
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | transexitcode: 0
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | exeerrorcode: 0
[2025-07-26 05:47:03] 2025-07-26 09:46:30,037 | INFO     | exeerrordiag: 
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | exitcode: 0
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | exitmsg: OK
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | cpuconsumptiontime: 35871 s
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | nevents: 400
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | neventsw: 0
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | pid: 822939
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | pgrp: 822939
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | corecount: 8
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | event service: False
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | sizes: {0: 2397475, 1: 2397475, 5: 2397765, 11: 2397821, 4821: 2424128, 4823: 2433126, 4825: 2433310, 4829: 2433504}
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | --------------------------------------------------
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | 
[2025-07-26 05:47:03] 2025-07-26 09:46:30,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-07-26 05:47:03] 2025-07-26 09:46:30,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | job 6745093217 has completed (purged errors)
[2025-07-26 05:47:03] 2025-07-26 09:46:30,069 | INFO     | overall cleanup function is called
[2025-07-26 05:47:03] 2025-07-26 09:46:31,077 | INFO     | --- collectZombieJob: --- 10, [822939]
[2025-07-26 05:47:03] 2025-07-26 09:46:31,077 | INFO     | zombie collector waiting for pid 822939
[2025-07-26 05:47:03] 2025-07-26 09:46:31,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:47:03] 2025-07-26 09:46:31,077 | INFO     | collected zombie processes
[2025-07-26 05:47:03] 2025-07-26 09:46:31,078 | INFO     | will attempt to kill all subprocesses of pid=822939
[2025-07-26 05:47:03] 2025-07-26 09:46:31,320 | INFO     | process IDs to be killed: [822939] (in reverse order)
[2025-07-26 05:47:03] 2025-07-26 09:46:31,409 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:47:03] 2025-07-26 09:46:31,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:47:03] 2025-07-26 09:46:31,419 | INFO     | did not find any defunct processes belonging to 822939
[2025-07-26 05:47:03] 2025-07-26 09:46:31,426 | INFO     | did not find any defunct processes belonging to 822939
[2025-07-26 05:47:03] 2025-07-26 09:46:31,426 | INFO     | ready for new job
[2025-07-26 05:47:03] 2025-07-26 09:46:31,426 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:47:03] 2025-07-26 09:46:31,427 | INFO     | ***************************************
[2025-07-26 05:47:03] 2025-07-26 09:46:31,427 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:47:03] 2025-07-26 09:46:31,428 | INFO     | ***************************************
[2025-07-26 05:47:03] 2025-07-26 09:46:31,428 | INFO     | 
[2025-07-26 05:47:03] 2025-07-26 09:46:31,431 | INFO     | architecture information:
[2025-07-26 05:47:03] 2025-07-26 09:46:31,431 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:47:03] 2025-07-26 09:46:31,451 | INFO     | cat /etc/os-release:
[2025-07-26 05:47:03] NAME="CentOS Linux"
[2025-07-26 05:47:03] VERSION="7 (Core)"
[2025-07-26 05:47:03] ID="centos"
[2025-07-26 05:47:03] ID_LIKE="rhel fedora"
[2025-07-26 05:47:03] VERSION_ID="7"
[2025-07-26 05:47:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:47:03] ANSI_COLOR="0;31"
[2025-07-26 05:47:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:47:03] HOME_URL="https://www.centos.org/"
[2025-07-26 05:47:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:47:03] 
[2025-07-26 05:47:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:47:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:47:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:47:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:47:03] 
[2025-07-26 05:47:03] 2025-07-26 09:46:31,451 | INFO     | ***************************************
[2025-07-26 05:47:03] 2025-07-26 09:46:31,954 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-07-26 05:47:03] 2025-07-26 09:46:31,976 | INFO     | sufficient remaining disk space (82915098624 B)
[2025-07-26 05:47:03] 2025-07-26 09:46:31,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:47:03] 2025-07-26 09:46:31,976 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:47:03] 2025-07-26 09:46:31,976 | INFO     | update_server=False
[2025-07-26 05:47:03] 2025-07-26 09:46:31,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:47:03] 2025-07-26 09:46:31,977 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:47:03] 2025-07-26 09:46:31,977 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:47:03] 2025-07-26 09:46:31,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:47:03] 2025-07-26 09:46:31,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:47:03] 2025-07-26 09:46:31,978 | INFO     | aborting loop
[2025-07-26 05:47:03] 2025-07-26 09:46:32,263 | INFO     | all job control threads have been joined
[2025-07-26 05:47:03] 2025-07-26 09:46:32,570 | INFO     | all payload control threads have been joined
[2025-07-26 05:47:03] 2025-07-26 09:46:32,932 | INFO     | all data control threads have been joined
[2025-07-26 05:47:03] 2025-07-26 09:46:32,982 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:32,982 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:32,983 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,154 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,228 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,249 | INFO     | [job] validate thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,269 | INFO     | [job] control thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,495 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,517 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,575 | INFO     | [payload] control thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,859 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,938 | INFO     | [data] control thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,971 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:33,982 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:34,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:35,984 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:47:03] 2025-07-26 09:46:37,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784931632960)>', '<ExcThread(monitor, started 139784425019136)>']
[2025-07-26 05:47:03] 2025-07-26 09:46:42,880 | INFO     | all workflow threads have been joined
[2025-07-26 05:47:03] 2025-07-26 09:46:42,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:47:03] 2025-07-26 09:46:42,881 | INFO     | traces error code: 0
[2025-07-26 05:47:03] 2025-07-26 09:46:42,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:47:03] 2025-07-26 09:47:03,076 | INFO     | PID=815598 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 05:47:03] 2025-07-26 09:47:03,077 | INFO     | .. there are 8 such processes running
[2025-07-26 05:47:03] 2025-07-26 09:47:03,077 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:47:03] 2025-07-26 09:47:03,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:47:03] 2025-07-26 09:47:03,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:47:03] 2025-07-26 09:47:03,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:47:03] 2025-07-26 09:47:03,077 | INFO     | [monitor] control thread has ended
[2025-07-26 05:47:03] 2025-07-26 09:47:03,191 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:47:03] 2025-07-26 09:47:03,194 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:47:03] 2025-07-26 09:47:03,198 [wrapper] pilotpid: 815598
[2025-07-26 05:47:03] 2025-07-26 09:47:03,201 [wrapper] Pilot exit status: 0
[2025-07-26 05:47:03] 2025-07-26 09:47:03,213 [wrapper] pandaids: 6745093217
[2025-07-26 05:47:03] 2025-07-26 09:47:03,272 [wrapper] cleanup supervisor_pilot 1039066 815599
[2025-07-26 05:47:03] 2025-07-26 09:47:03,275 [wrapper] Test setup, not cleaning
[2025-07-26 05:47:03] 2025-07-26 09:47:03,278 [wrapper] apfmon messages muted
[2025-07-26 05:47:03] 2025-07-26 09:47:03,282 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:47:03] 2025-07-26 09:47:03,285 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:47:03]  *** Error codes and diagnostics ***
[2025-07-26 05:47:03]     "exeErrorCode": 0,
[2025-07-26 05:47:03]     "exeErrorDiag": "",
[2025-07-26 05:47:03]     "pilotErrorCode": 0,
[2025-07-26 05:47:03]     "pilotErrorDiag": "",
[2025-07-26 05:47:03]  *** Listing of results directory ***
[2025-07-26 05:47:03] total 433360
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 21:05 pilot3.tar.gz
[2025-07-26 05:47:03] -rwx------. 1 boincer umatlas     36292 Jul 25 21:49 runpilot2-wrapper.sh
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 21:49 queuedata.json
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas       100 Jul 26 04:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:47:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 04:25 run_atlas
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas       105 Jul 26 04:25 job.xml
[2025-07-26 05:47:03] -rw-r--r--. 2 boincer umatlas 229095120 Jul 26 04:25 EVNT.45743347._001700.pool.root.1
[2025-07-26 05:47:03] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 04:25 start_atlas.sh
[2025-07-26 05:47:03] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 04:25 shared
[2025-07-26 05:47:03] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 04:25 input.tar.gz
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas         0 Jul 26 04:25 boinc_lockfile
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 04:25 pandaJob.out
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas    980133 Jul 26 04:25 agis_schedconf.cvmfs.json
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas   1593052 Jul 26 04:25 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:47:03] drwx------. 4 boincer umatlas      4096 Jul 26 04:25 pilot3
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas      6895 Jul 26 05:37 init_data.xml
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas 209224282 Jul 26 05:45 HITS.45743349._030430.pool.root.1
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas       529 Jul 26 05:45 boinc_task_state.xml
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas        95 Jul 26 05:46 pilot_heartbeat.json
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas      1024 Jul 26 05:46 memory_monitor_summary.json
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas    317262 Jul 26 05:46 log.45743349._030430.job.log.tgz.1
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas      7766 Jul 26 05:46 heartbeat.json
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas        27 Jul 26 05:47 wrapper_checkpoint.txt
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 05:47 boinc_mmap_file
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas       821 Jul 26 05:47 pilotlog.txt
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas    465180 Jul 26 05:47 log.45743349._030430.job.log.1
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas       357 Jul 26 05:47 output.list
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas       620 Jul 26 05:47 runtime_log
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas    798720 Jul 26 05:47 result.tar.gz
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas       652 Jul 26 05:47 ZfXMDmrDjz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvvzKDmQB6I3n.diag
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 05:47 runtime_log.err
[2025-07-26 05:47:03] -rw-r--r--. 1 boincer umatlas     21650 Jul 26 05:47 stderr.txt
[2025-07-26 05:47:03] HITS file was successfully produced:
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas 209224282 Jul 26 05:45 shared/HITS.pool.root.1
[2025-07-26 05:47:03]  *** Contents of shared directory: ***
[2025-07-26 05:47:03] total 429388
[2025-07-26 05:47:03] -rw-r--r--. 2 boincer umatlas 229095120 Jul 26 04:25 ATLAS.root_0
[2025-07-26 05:47:03] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 04:25 start_atlas.sh
[2025-07-26 05:47:03] -rw-r--r--. 2 boincer umatlas    542897 Jul 26 04:25 input.tar.gz
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas 209224282 Jul 26 05:45 HITS.pool.root.1
[2025-07-26 05:47:03] -rw-------. 1 boincer umatlas    798720 Jul 26 05:47 result.tar.gz
05:47:05 (811213): run_atlas exited; CPU time 35960.222197
05:47:05 (811213): called boinc_finish(0)

</stderr_txt>
]]>

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