Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:32:18 (3838508): wrapper (7.7.26015): starting
17:32:18 (3838508): wrapper: running run_atlas (--nthreads 2)
[2025-07-26 17:32:18] Arguments: --nthreads 2
[2025-07-26 17:32:18] Threads: 2
[2025-07-26 17:32:18] Checking for CVMFS
[2025-07-26 17:32:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:32:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:32:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:32:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:32:19] 2.9.2.0 2667837 6728 60892 148782 3 56 24808293 36864000 0 130560 0 2925077 99.983 250747 2775 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 17:32:19] CVMFS is ok
[2025-07-26 17:32:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:32:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:32:19] Further information can be found at the LHC@home message board.
[2025-07-26 17:32:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:32:19] Checking for apptainer binary...
[2025-07-26 17:32:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:32:19] Running /usr/bin/apptainer --version
[2025-07-26 17:32:19] apptainer version 1.4.1-1.1
[2025-07-26 17:32:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:32:19] timemachine
[2025-07-26 17:32:19] apptainer works
[2025-07-26 17:32:19] Set ATHENA_PROC_NUMBER=2
[2025-07-26 17:32:19] Set ATHENA_CORE_NUMBER=2
[2025-07-26 17:32:19] Starting ATLAS job with PandaID=6745093139
[2025-07-26 17:32:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 20:26:27]  *** The last 200 lines of the pilot log: ***
[2025-07-26 20:26:27] 2025-07-26 18:26:10,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:26:27] 2025-07-26 18:26:12,750 | INFO     | monitor loop #798: job 0:6745093139 is in state 'finished'
[2025-07-26 20:26:27] 2025-07-26 18:26:12,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,014 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 20:26:27] 2025-07-26 18:26:13,015 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3749.5254999999997
[2025-07-26 20:26:27] 2025-07-26 18:26:13,016 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745093139/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,016 | INFO     | extracted standard info from prmon json
[2025-07-26 20:26:27] 2025-07-26 18:26:13,016 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 20:26:27] 2025-07-26 18:26:13,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 20:26:27] 2025-07-26 18:26:13,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 20:26:27] 2025-07-26 18:26:13,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | fitting pss+swap vs Time
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | sum of square deviations: 1550429070.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | sum of deviations: -11899167275.999998
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | mean x: 1753549152.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | mean y: 2345503.730994152
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | -- intersect: 13460410171.169115
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | intersect: 13460410171.169115
[2025-07-26 20:26:27] 2025-07-26 18:26:13,018 | INFO     | chi2: 1.550321489994945
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | sum of square deviations: 1418361477.5
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | sum of deviations: -10965005041.000004
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | mean x: 1753548999.5
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | mean y: 2346582.7228915663
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | -- intersect: 13558604225.202478
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | intersect: 13558604225.202478
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | chi2: 1.5500760650841716
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | current chi2=1.5500760650841716 (change=0.015830581744311914 %)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | right removable region: 165
[2025-07-26 20:26:27] 2025-07-26 18:26:13,019 | INFO     | sum of square deviations: 1418361477.5
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | sum of deviations: -33285520774.999996
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | mean x: 1753549304.5
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | mean y: 2369769.2771084337
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | -- intersect: 41153939894.96924
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | intersect: 41153939894.96924
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | chi2: 0.10605467296445342
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | current chi2=0.10605467296445342 (change=93.15918190846989 %)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,020 | INFO     | sum of square deviations: 1294014960.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | sum of deviations: -28503781648.999996
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | mean x: 1753549457.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | mean y: 2363933.0807453417
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | -- intersect: 38628494525.14941
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | intersect: 38628494525.14941
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | chi2: 0.09853356224730571
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | current chi2=0.09853356224730571 (change=7.0917296776433245 %)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | left removable region: 20
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | sum of square deviations: 945282840.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | sum of deviations: -19827425787.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,021 | INFO     | mean x: 1753549579.0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | mean y: 2355693.703448276
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | -- intersect: 36783277413.860344
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | intersect: 36783277413.860344
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | chi2: 0.0905514500059747
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | -- intersect: 36783277413.860344
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | current memory leak: -20.98 B/s (using 145 data points, chi2=0.09)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | could have reported an average CPU frequency of 3745 MHz (9 samples)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | ..............................
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . Timing measurements:
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . get job = 0 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . initial setup = 1 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . payload setup = 4 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . stage-in = 0 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . payload execution = 10394 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . stage-out = 0 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | . log creation = 0 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,022 | INFO     | ..............................
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | 
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | job summary report
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | --------------------------------------------------
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | PanDA job id: 6745093139
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | task id: 45743349
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | errors: (none)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 20:26:27] 2025-07-26 18:26:13,128 | INFO     | pilot state: finished 
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | transexitcode: 0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | exeerrorcode: 0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | exeerrordiag: 
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | exitcode: 0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | exitmsg: OK
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | cpuconsumptiontime: 20353 s
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | nevents: 400
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | neventsw: 0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | pid: 3848595
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | pgrp: 3848595
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | corecount: 2
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | event service: False
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | sizes: {0: 2397478, 3: 2397740, 11: 2397768, 10401: 2426845, 10403: 2435905, 10413: 2436107}
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | --------------------------------------------------
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | 
[2025-07-26 20:26:27] 2025-07-26 18:26:13,129 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 20:26:27] 2025-07-26 18:26:13,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,160 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 20:26:27] 2025-07-26 18:26:13,160 | INFO     | job 6745093139 has completed (purged errors)
[2025-07-26 20:26:27] 2025-07-26 18:26:13,160 | INFO     | overall cleanup function is called
[2025-07-26 20:26:27] 2025-07-26 18:26:14,168 | INFO     | --- collectZombieJob: --- 10, [3848595]
[2025-07-26 20:26:27] 2025-07-26 18:26:14,169 | INFO     | zombie collector waiting for pid 3848595
[2025-07-26 20:26:27] 2025-07-26 18:26:14,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 20:26:27] 2025-07-26 18:26:14,169 | INFO     | collected zombie processes
[2025-07-26 20:26:27] 2025-07-26 18:26:14,169 | INFO     | will attempt to kill all subprocesses of pid=3848595
[2025-07-26 20:26:27] 2025-07-26 18:26:14,212 | INFO     | process IDs to be killed: [3848595] (in reverse order)
[2025-07-26 20:26:27] 2025-07-26 18:26:14,237 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 20:26:27] 2025-07-26 18:26:14,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 20:26:27] 2025-07-26 18:26:14,238 | INFO     | did not find any defunct processes belonging to 3848595
[2025-07-26 20:26:27] 2025-07-26 18:26:14,239 | INFO     | did not find any defunct processes belonging to 3848595
[2025-07-26 20:26:27] 2025-07-26 18:26:14,239 | INFO     | ready for new job
[2025-07-26 20:26:27] 2025-07-26 18:26:14,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 20:26:27] 2025-07-26 18:26:14,240 | INFO     | ***************************************
[2025-07-26 20:26:27] 2025-07-26 18:26:14,240 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 20:26:27] 2025-07-26 18:26:14,240 | INFO     | ***************************************
[2025-07-26 20:26:27] 2025-07-26 18:26:14,240 | INFO     | 
[2025-07-26 20:26:27] 2025-07-26 18:26:14,241 | INFO     | architecture information:
[2025-07-26 20:26:27] 2025-07-26 18:26:14,241 | INFO     | executing command: cat /etc/os-release
[2025-07-26 20:26:27] 2025-07-26 18:26:14,251 | INFO     | cat /etc/os-release:
[2025-07-26 20:26:27] NAME="CentOS Linux"
[2025-07-26 20:26:27] VERSION="7 (Core)"
[2025-07-26 20:26:27] ID="centos"
[2025-07-26 20:26:27] ID_LIKE="rhel fedora"
[2025-07-26 20:26:27] VERSION_ID="7"
[2025-07-26 20:26:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 20:26:27] ANSI_COLOR="0;31"
[2025-07-26 20:26:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 20:26:27] HOME_URL="https://www.centos.org/"
[2025-07-26 20:26:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 20:26:27] 
[2025-07-26 20:26:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 20:26:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 20:26:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 20:26:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 20:26:27] 
[2025-07-26 20:26:27] 2025-07-26 18:26:14,252 | INFO     | ***************************************
[2025-07-26 20:26:27] 2025-07-26 18:26:14,755 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 20:26:27] 2025-07-26 18:26:14,771 | INFO     | sufficient remaining disk space (6708338360320 B)
[2025-07-26 20:26:27] 2025-07-26 18:26:14,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 20:26:27] 2025-07-26 18:26:14,772 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 20:26:27] 2025-07-26 18:26:14,772 | INFO     | update_server=False
[2025-07-26 20:26:27] 2025-07-26 18:26:14,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 20:26:27] 2025-07-26 18:26:14,773 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 20:26:27] 2025-07-26 18:26:14,773 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 20:26:27] 2025-07-26 18:26:14,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 20:26:27] 2025-07-26 18:26:14,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 20:26:27] 2025-07-26 18:26:14,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:26:27] 2025-07-26 18:26:15,215 | INFO     | all job control threads have been joined
[2025-07-26 20:26:27] 2025-07-26 18:26:15,254 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 20:26:27] 2025-07-26 18:26:15,254 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 20:26:27] 2025-07-26 18:26:15,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 20:26:27] 2025-07-26 18:26:15,255 | INFO     | will abort loop
[2025-07-26 20:26:27] 2025-07-26 18:26:15,542 | INFO     | all data control threads have been joined
[2025-07-26 20:26:27] 2025-07-26 18:26:15,778 | INFO     | [job] retrieve thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:15,779 | INFO     | [job] queue monitor thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:15,899 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:15,925 | INFO     | [payload] failed_post thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:15,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 20:26:27] 2025-07-26 18:26:15,982 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:16,015 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:16,221 | INFO     | [job] control thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:16,225 | INFO     | all payload control threads have been joined
[2025-07-26 20:26:27] 2025-07-26 18:26:16,260 | INFO     | [job] job monitor thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:16,548 | INFO     | [data] control thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:16,686 | INFO     | [payload] validate_post thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:17,231 | INFO     | [payload] control thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:17,238 | INFO     | [data] copytool_in thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:17,266 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:17,267 | INFO     | [job] validate thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:17,978 | INFO     | [data] copytool_out thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:18,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 20:26:27] 2025-07-26 18:26:22,008 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 20:26:27] 2025-07-26 18:26:22,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644028454720)>', '<ExcThread(monitor, started 140643747727104)>']
[2025-07-26 20:26:27] 2025-07-26 18:26:22,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 20:26:27] 2025-07-26 18:26:22,816 | INFO     | [monitor] control thread has ended
[2025-07-26 20:26:27] 2025-07-26 18:26:27,309 | INFO     | all workflow threads have been joined
[2025-07-26 20:26:27] 2025-07-26 18:26:27,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 20:26:27] 2025-07-26 18:26:27,309 | INFO     | traces error code: 0
[2025-07-26 20:26:27] 2025-07-26 18:26:27,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 20:26:27] 2025-07-26 18:26:27,380 [wrapper] ==== pilot stdout END ====
[2025-07-26 20:26:27] 2025-07-26 18:26:27,384 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 20:26:27] 2025-07-26 18:26:27,387 [wrapper] pilotpid: 3842133
[2025-07-26 20:26:27] 2025-07-26 18:26:27,390 [wrapper] Pilot exit status: 0
[2025-07-26 20:26:27] 2025-07-26 18:26:27,401 [wrapper] pandaids: 6745093139
[2025-07-26 20:26:27] 2025-07-26 18:26:27,420 [wrapper] cleanup supervisor_pilot 3868138 3842134
[2025-07-26 20:26:27] 2025-07-26 18:26:27,424 [wrapper] Test setup, not cleaning
[2025-07-26 20:26:27] 2025-07-26 18:26:27,427 [wrapper] apfmon messages muted
[2025-07-26 20:26:27] 2025-07-26 18:26:27,431 [wrapper] ==== wrapper stdout END ====
[2025-07-26 20:26:27] 2025-07-26 18:26:27,434 [wrapper] ==== wrapper stderr END ====
[2025-07-26 20:26:27]  *** Error codes and diagnostics ***
[2025-07-26 20:26:27]     "exeErrorCode": 0,
[2025-07-26 20:26:27]     "exeErrorDiag": "",
[2025-07-26 20:26:27]     "pilotErrorCode": 0,
[2025-07-26 20:26:27]     "pilotErrorDiag": "",
[2025-07-26 20:26:27]  *** Listing of results directory ***
[2025-07-26 20:26:27] total 431184
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc    530466 Jul 26 03:05 pilot3.tar.gz
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc      5112 Jul 26 03:47 queuedata.json
[2025-07-26 20:26:27] -rwx------ 1 boinc boinc     36292 Jul 26 03:48 runpilot2-wrapper.sh
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc       100 Jul 26 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 20:26:27] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 17:32 run_atlas
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc       105 Jul 26 17:32 job.xml
[2025-07-26 20:26:27] -rw-r--r-- 2 boinc boinc 230078146 Jul 26 17:32 EVNT.45743347._001697.pool.root.1
[2025-07-26 20:26:27] -rw-r--r-- 2 boinc boinc    542899 Jul 26 17:32 input.tar.gz
[2025-07-26 20:26:27] -rw-r--r-- 2 boinc boinc     15095 Jul 26 17:32 start_atlas.sh
[2025-07-26 20:26:27] drwxrwx--x 2 boinc boinc      4096 Jul 26 17:32 shared
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc         0 Jul 26 17:32 boinc_setup_complete
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc      6282 Jul 26 17:32 init_data.xml
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc         0 Jul 26 17:32 boinc_lockfile
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc      2563 Jul 26 17:32 pandaJob.out
[2025-07-26 20:26:27] -rw------- 1 boinc boinc    980133 Jul 26 17:32 agis_schedconf.cvmfs.json
[2025-07-26 20:26:27] -rw------- 1 boinc boinc   1593052 Jul 26 17:32 agis_ddmendpoints.agis.ALL.json
[2025-07-26 20:26:27] drwx------ 4 boinc boinc      4096 Jul 26 17:32 pilot3
[2025-07-26 20:26:27] -rw------- 1 boinc boinc 205088065 Jul 26 20:25 HITS.45743349._030352.pool.root.1
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc       531 Jul 26 20:25 boinc_task_state.xml
[2025-07-26 20:26:27] -rw------- 1 boinc boinc      1028 Jul 26 20:25 memory_monitor_summary.json
[2025-07-26 20:26:27] -rw------- 1 boinc boinc    277330 Jul 26 20:26 log.45743349._030352.job.log.tgz.1
[2025-07-26 20:26:27] -rw------- 1 boinc boinc      7786 Jul 26 20:26 heartbeat.json
[2025-07-26 20:26:27] -rw------- 1 boinc boinc        95 Jul 26 20:26 pilot_heartbeat.json
[2025-07-26 20:26:27] -rw------- 1 boinc boinc      4671 Jul 26 20:26 pilotlog.txt
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc      8192 Jul 26 20:26 boinc_mmap_file
[2025-07-26 20:26:27] -rw------- 1 boinc boinc    965188 Jul 26 20:26 log.45743349._030352.job.log.1
[2025-07-26 20:26:27] -rw------- 1 boinc boinc       357 Jul 26 20:26 output.list
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc       620 Jul 26 20:26 runtime_log
[2025-07-26 20:26:27] -rw------- 1 boinc boinc   1259520 Jul 26 20:26 result.tar.gz
[2025-07-26 20:26:27] -rw------- 1 boinc boinc       666 Jul 26 20:26 wcrNDm2Cjz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMvzKDmBGB1Vn.diag
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc      8760 Jul 26 20:26 runtime_log.err
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc        28 Jul 26 20:26 wrapper_checkpoint.txt
[2025-07-26 20:26:27] -rw-r--r-- 1 boinc boinc     21088 Jul 26 20:26 stderr.txt
[2025-07-26 20:26:27] HITS file was successfully produced:
[2025-07-26 20:26:27] -rw------- 1 boinc boinc 205088065 Jul 26 20:25 shared/HITS.pool.root.1
[2025-07-26 20:26:27]  *** Contents of shared directory: ***
[2025-07-26 20:26:27] total 426760
[2025-07-26 20:26:27] -rw-r--r-- 2 boinc boinc 230078146 Jul 26 17:32 ATLAS.root_0
[2025-07-26 20:26:27] -rw-r--r-- 2 boinc boinc    542899 Jul 26 17:32 input.tar.gz
[2025-07-26 20:26:27] -rw-r--r-- 2 boinc boinc     15095 Jul 26 17:32 start_atlas.sh
[2025-07-26 20:26:27] -rw------- 1 boinc boinc 205088065 Jul 26 20:25 HITS.pool.root.1
[2025-07-26 20:26:27] -rw------- 1 boinc boinc   1259520 Jul 26 20:26 result.tar.gz
20:26:29 (3838508): run_atlas exited; CPU time 20397.461517
20:26:29 (3838508): called boinc_finish(0)

</stderr_txt>
]]>

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