Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:45:56 (2003925): wrapper (7.7.26015): starting
03:45:56 (2003925): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 03:45:56] Arguments: --nthreads 8
[2025-07-26 03:45:56] Threads: 8
[2025-07-26 03:45:56] Checking for CVMFS
[2025-07-26 03:45:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 03:45:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 03:45:56] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 03:45:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 03:45:57] 2.13.0.0 112940 25509 177588 148768 3 377 34187972 40960000 37214 16776704 0 211386756 99.653 220071011 30091 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 03:45:57] CVMFS is ok
[2025-07-26 03:45:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 03:45:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 03:45:57] Further information can be found at the LHC@home message board.
[2025-07-26 03:45:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 03:45:57] Checking for apptainer binary...
[2025-07-26 03:45:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 03:45:57] Running /usr/bin/apptainer --version
[2025-07-26 03:45:57] apptainer version 1.4.1-1.el9
[2025-07-26 03:45:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 03:45:57] c8-7-3.aglt2.org
[2025-07-26 03:45:57] apptainer works
[2025-07-26 03:45:57] Set ATHENA_PROC_NUMBER=8
[2025-07-26 03:45:57] Set ATHENA_CORE_NUMBER=8
[2025-07-26 03:45:57] Starting ATLAS job with PandaID=6745093491
[2025-07-26 03:45:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:17:09]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:17:09] 2025-07-26 09:15:55,951 | INFO     | log transfer has been attempted: DONE
[2025-07-26 05:17:09] 2025-07-26 09:15:55,951 | INFO     | job 6745093491 has finished - writing final server update
[2025-07-26 05:17:09] 2025-07-26 09:15:55,951 | INFO     | total number of processed events: 400 (read)
[2025-07-26 05:17:09] 2025-07-26 09:15:55,968 | INFO     | executing command: lscpu
[2025-07-26 05:17:09] 2025-07-26 09:15:56,188 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 05:17:09] 2025-07-26 09:15:58,294 | INFO     | monitor loop #342: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:15:58,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:00,815 | INFO     | monitor loop #343: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:00,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:03,320 | INFO     | monitor loop #344: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:03,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:05,843 | INFO     | monitor loop #345: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:05,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:07,828 | INFO     | PID=2009613 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 05:17:09] 2025-07-26 09:16:07,831 | INFO     | .. there are 65 such processes running
[2025-07-26 05:17:09] 2025-07-26 09:16:08,348 | INFO     | monitor loop #346: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:08,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:10,877 | INFO     | monitor loop #347: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:10,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:13,390 | INFO     | monitor loop #348: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:13,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:15,896 | INFO     | monitor loop #349: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:15,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:18,401 | INFO     | monitor loop #350: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:18,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:20,908 | INFO     | monitor loop #351: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:20,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:22,194 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-07-26 05:17:09] 2025-07-26 09:16:23,421 | INFO     | monitor loop #352: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:23,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:25,931 | INFO     | monitor loop #353: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:25,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:28,436 | INFO     | monitor loop #354: job 0:6745093491 is in state 'finished'
[2025-07-26 05:17:09] 2025-07-26 09:16:28,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,058 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 05:17:09] 2025-07-26 09:16:30,067 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3711.1181484374997
[2025-07-26 05:17:09] 2025-07-26 09:16:30,105 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6745093491/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,106 | INFO     | extracted standard info from prmon json
[2025-07-26 05:17:09] 2025-07-26 09:16:30,106 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:17:09] 2025-07-26 09:16:30,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:17:09] 2025-07-26 09:16:30,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:17:09] 2025-07-26 09:16:30,107 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | sum of square deviations: 158736033.80000016
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | sum of deviations: -13199636271.250006
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | mean x: 1753518781.55
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | mean y: 2261273.9375
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | -- intersect: 145815467999.43823
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | intersect: 145815467999.43823
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | chi2: 0.16534276173375215
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | -- intersect: 145815467999.43823
[2025-07-26 05:17:09] 2025-07-26 09:16:30,108 | INFO     | current memory leak: -83.15 B/s (using 80 data points, chi2=0.17)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | could have reported an average CPU frequency of 3778 MHz (6 samples)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | ..............................
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . Timing measurements:
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . get job = 0 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . initial setup = 5 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . payload setup = 30 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . stage-in = 0 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . payload execution = 5291 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . stage-out = 1 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | . log creation = 0 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,109 | INFO     | ..............................
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | 
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | job summary report
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | --------------------------------------------------
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | PanDA job id: 6745093491
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | task id: 45743349
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | errors: (none)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | pilot state: finished 
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | transexitcode: 0
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | exeerrorcode: 0
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | exeerrordiag: 
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | exitcode: 0
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | exitmsg: OK
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | cpuconsumptiontime: 27136 s
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | nevents: 400
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | neventsw: 0
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | pid: 2020454
[2025-07-26 05:17:09] 2025-07-26 09:16:30,238 | INFO     | pgrp: 2020454
[2025-07-26 05:17:09] 2025-07-26 09:16:30,239 | INFO     | corecount: 8
[2025-07-26 05:17:09] 2025-07-26 09:16:30,239 | INFO     | event service: False
[2025-07-26 05:17:09] 2025-07-26 09:16:30,239 | INFO     | sizes: {0: 2397475, 11: 2397765, 21: 2397765, 5326: 2424095, 5328: 2433093, 5331: 2433149, 5367: 2433471}
[2025-07-26 05:17:09] 2025-07-26 09:16:30,239 | INFO     | --------------------------------------------------
[2025-07-26 05:17:09] 2025-07-26 09:16:30,239 | INFO     | 
[2025-07-26 05:17:09] 2025-07-26 09:16:30,239 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | job 6745093491 has completed (purged errors)
[2025-07-26 05:17:09] 2025-07-26 09:16:30,409 | INFO     | overall cleanup function is called
[2025-07-26 05:17:09] 2025-07-26 09:16:31,463 | INFO     | --- collectZombieJob: --- 10, [2020454]
[2025-07-26 05:17:09] 2025-07-26 09:16:31,463 | INFO     | zombie collector waiting for pid 2020454
[2025-07-26 05:17:09] 2025-07-26 09:16:31,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:17:09] 2025-07-26 09:16:31,463 | INFO     | collected zombie processes
[2025-07-26 05:17:09] 2025-07-26 09:16:31,463 | INFO     | will attempt to kill all subprocesses of pid=2020454
[2025-07-26 05:17:09] 2025-07-26 09:16:33,177 | INFO     | PID=2009613 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:17:09] 2025-07-26 09:16:33,177 | INFO     | .. there are 64 such processes running
[2025-07-26 05:17:09] 2025-07-26 09:16:33,643 | INFO     | process IDs to be killed: [2020454] (in reverse order)
[2025-07-26 05:17:09] 2025-07-26 09:16:34,193 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:17:09] 2025-07-26 09:16:34,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:17:09] 2025-07-26 09:16:34,258 | INFO     | did not find any defunct processes belonging to 2020454
[2025-07-26 05:17:09] 2025-07-26 09:16:34,288 | INFO     | did not find any defunct processes belonging to 2020454
[2025-07-26 05:17:09] 2025-07-26 09:16:34,288 | INFO     | ready for new job
[2025-07-26 05:17:09] 2025-07-26 09:16:34,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:17:09] 2025-07-26 09:16:34,289 | INFO     | ***************************************
[2025-07-26 05:17:09] 2025-07-26 09:16:34,289 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:17:09] 2025-07-26 09:16:34,289 | INFO     | ***************************************
[2025-07-26 05:17:09] 2025-07-26 09:16:34,289 | INFO     | 
[2025-07-26 05:17:09] 2025-07-26 09:16:34,294 | INFO     | architecture information:
[2025-07-26 05:17:09] 2025-07-26 09:16:34,294 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:17:09] 2025-07-26 09:16:34,385 | INFO     | cat /etc/os-release:
[2025-07-26 05:17:09] NAME="CentOS Linux"
[2025-07-26 05:17:09] VERSION="7 (Core)"
[2025-07-26 05:17:09] ID="centos"
[2025-07-26 05:17:09] ID_LIKE="rhel fedora"
[2025-07-26 05:17:09] VERSION_ID="7"
[2025-07-26 05:17:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:17:09] ANSI_COLOR="0;31"
[2025-07-26 05:17:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:17:09] HOME_URL="https://www.centos.org/"
[2025-07-26 05:17:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:17:09] 
[2025-07-26 05:17:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:17:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:17:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:17:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:17:09] 
[2025-07-26 05:17:09] 2025-07-26 09:16:34,385 | INFO     | ***************************************
[2025-07-26 05:17:09] 2025-07-26 09:16:34,892 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-26 05:17:09] 2025-07-26 09:16:34,954 | INFO     | sufficient remaining disk space (172494946304 B)
[2025-07-26 05:17:09] 2025-07-26 09:16:34,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:17:09] 2025-07-26 09:16:34,955 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:17:09] 2025-07-26 09:16:34,955 | INFO     | update_server=False
[2025-07-26 05:17:09] 2025-07-26 09:16:34,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:17:09] 2025-07-26 09:16:34,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:17:09] 2025-07-26 09:16:34,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:17:09] 2025-07-26 09:16:34,958 | INFO     | aborting loop
[2025-07-26 05:17:09] 2025-07-26 09:16:35,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:17:09] 2025-07-26 09:16:35,524 | INFO     | all payload control threads have been joined
[2025-07-26 05:17:09] 2025-07-26 09:16:35,587 | INFO     | all job control threads have been joined
[2025-07-26 05:17:09] 2025-07-26 09:16:35,861 | INFO     | all data control threads have been joined
[2025-07-26 05:17:09] 2025-07-26 09:16:35,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:17:09] 2025-07-26 09:16:35,964 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:35,977 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,115 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,296 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,530 | INFO     | [payload] control thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,560 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,593 | INFO     | [job] control thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,664 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,664 | INFO     | [job] validate thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,867 | INFO     | [data] control thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,926 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:36,963 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:37,085 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:37,372 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:39,954 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:45,794 | INFO     | job.realtimelogging is not enabled
[2025-07-26 05:17:09] 2025-07-26 09:16:46,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:17:09] 2025-07-26 09:16:47,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626083911488)>', '<ExcThread(monitor, started 140625592698624)>']
[2025-07-26 05:17:09] 2025-07-26 09:16:52,984 | INFO     | all workflow threads have been joined
[2025-07-26 05:17:09] 2025-07-26 09:16:52,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:17:09] 2025-07-26 09:16:52,984 | INFO     | traces error code: 0
[2025-07-26 05:17:09] 2025-07-26 09:16:52,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:17:09] 2025-07-26 09:17:06,219 | INFO     | PID=2009613 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:17:09] 2025-07-26 09:17:06,219 | INFO     | .. there are 64 such processes running
[2025-07-26 05:17:09] 2025-07-26 09:17:06,220 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:17:09] 2025-07-26 09:17:06,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:17:09] 2025-07-26 09:17:06,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:17:09] 2025-07-26 09:17:06,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:17:09] 2025-07-26 09:17:06,220 | INFO     | [monitor] control thread has ended
[2025-07-26 05:17:09] 2025-07-26 09:17:07,119 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:17:09] 2025-07-26 09:17:07,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:17:09] 2025-07-26 09:17:07,179 [wrapper] pilotpid: 2009613
[2025-07-26 05:17:09] 2025-07-26 09:17:07,186 [wrapper] Pilot exit status: 0
[2025-07-26 05:17:09] 2025-07-26 09:17:07,358 [wrapper] pandaids: 6745093491
[2025-07-26 05:17:09] 2025-07-26 09:17:08,279 [wrapper] cleanup supervisor_pilot 2666113 2009614
[2025-07-26 05:17:09] 2025-07-26 09:17:08,300 [wrapper] Test setup, not cleaning
[2025-07-26 05:17:09] 2025-07-26 09:17:08,336 [wrapper] apfmon messages muted
[2025-07-26 05:17:09] 2025-07-26 09:17:08,410 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:17:09] 2025-07-26 09:17:08,528 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:17:09]  *** Error codes and diagnostics ***
[2025-07-26 05:17:09]     "exeErrorCode": 0,
[2025-07-26 05:17:09]     "exeErrorDiag": "",
[2025-07-26 05:17:09]     "pilotErrorCode": 0,
[2025-07-26 05:17:09]     "pilotErrorDiag": "",
[2025-07-26 05:17:09]  *** Listing of results directory ***
[2025-07-26 05:17:09] total 435748
[2025-07-26 05:17:09] -rwx------. 1 boincer umatlas     36292 Jul 25 22:01 runpilot2-wrapper.sh
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 22:01 queuedata.json
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 22:01 pilot3.tar.gz
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas       100 Jul 26 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:17:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 03:45 run_atlas
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas       105 Jul 26 03:45 job.xml
[2025-07-26 05:17:09] -rw-r--r--. 2 boincer umatlas 229693000 Jul 26 03:45 EVNT.45743347._001708.pool.root.1
[2025-07-26 05:17:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 03:45 start_atlas.sh
[2025-07-26 05:17:09] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 03:45 shared
[2025-07-26 05:17:09] -rw-r--r--. 2 boincer umatlas    542889 Jul 26 03:45 input.tar.gz
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas         0 Jul 26 03:45 boinc_lockfile
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 03:45 pandaJob.out
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas    980017 Jul 26 03:46 agis_schedconf.cvmfs.json
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas   1593052 Jul 26 03:46 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:17:09] drwx------. 4 boincer umatlas      4096 Jul 26 03:46 pilot3
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas      7161 Jul 26 05:09 init_data.xml
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas 211041408 Jul 26 05:15 HITS.45743349._030628.pool.root.1
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas       530 Jul 26 05:15 boinc_task_state.xml
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas      1035 Jul 26 05:15 memory_monitor_summary.json
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas    322093 Jul 26 05:15 log.45743349._030628.job.log.tgz.1
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas      7780 Jul 26 05:16 heartbeat.json
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas       823 Jul 26 05:17 pilotlog.txt
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas        95 Jul 26 05:17 pilot_heartbeat.json
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas        27 Jul 26 05:17 wrapper_checkpoint.txt
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 05:17 boinc_mmap_file
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas    475556 Jul 26 05:17 log.45743349._030628.job.log.1
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas       357 Jul 26 05:17 output.list
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas       620 Jul 26 05:17 runtime_log
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas    819200 Jul 26 05:17 result.tar.gz
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas      8650 Jul 26 05:17 runtime_log.err
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas       650 Jul 26 05:17 3iqMDmaPjz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmixzKDmQLfkLm.diag
[2025-07-26 05:17:09] -rw-r--r--. 1 boincer umatlas     22439 Jul 26 05:17 stderr.txt
[2025-07-26 05:17:09] HITS file was successfully produced:
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas 211041408 Jul 26 05:15 shared/HITS.pool.root.1
[2025-07-26 05:17:09]  *** Contents of shared directory: ***
[2025-07-26 05:17:09] total 431760
[2025-07-26 05:17:09] -rw-r--r--. 2 boincer umatlas 229693000 Jul 26 03:45 ATLAS.root_0
[2025-07-26 05:17:09] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 03:45 start_atlas.sh
[2025-07-26 05:17:09] -rw-r--r--. 2 boincer umatlas    542889 Jul 26 03:45 input.tar.gz
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas 211041408 Jul 26 05:15 HITS.pool.root.1
[2025-07-26 05:17:09] -rw-------. 1 boincer umatlas    819200 Jul 26 05:17 result.tar.gz
05:17:10 (2003925): run_atlas exited; CPU time 27290.357525
05:17:10 (2003925): called boinc_finish(0)

</stderr_txt>
]]>

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