Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:47:52 (32741): wrapper (7.7.26015): starting
18:47:52 (32741): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 18:47:52] Arguments: --nthreads 8
[2025-07-26 18:47:52] Threads: 8
[2025-07-26 18:47:52] Checking for CVMFS
[2025-07-26 18:47:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 18:47:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 18:47:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 18:47:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 18:47:53] 2.11.2.0 2200 108345 109764 148783 0 156 15762016 25165825 4221 130560 0 63598718 99.841 47153523 3262 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 18:47:53] CVMFS is ok
[2025-07-26 18:47:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 18:47:53] Checking for apptainer binary...
[2025-07-26 18:47:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 18:47:53] Running /usr/bin/apptainer --version
[2025-07-26 18:47:53] apptainer version 1.3.2-1.el7
[2025-07-26 18:47:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 18:47:54] cg-vwn296.simple-grid.lan
[2025-07-26 18:47:54] apptainer works
[2025-07-26 18:47:54] Set ATHENA_PROC_NUMBER=8
[2025-07-26 18:47:54] Set ATHENA_CORE_NUMBER=8
[2025-07-26 18:47:54] Starting ATLAS job with PandaID=6745062477
[2025-07-26 18:47:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 00:39:18]  *** The last 200 lines of the pilot log: ***
[2025-07-27 00:39:18] 2025-07-26 21:29:53,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 00:39:18] 2025-07-26 21:29:53,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 00:39:18] 2025-07-26 21:29:53,924 | INFO     | fitting pss+swap vs Time
[2025-07-27 00:39:18] 2025-07-26 21:29:53,925 | INFO     | sum of square deviations: 6448679050.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,927 | INFO     | sum of deviations: 8943493222.999992
[2025-07-27 00:39:18] 2025-07-26 21:29:53,927 | INFO     | mean x: 1753556917.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,927 | INFO     | mean y: 2493318.9345454546
[2025-07-27 00:39:18] 2025-07-26 21:29:53,928 | INFO     | -- intersect: -2429465890.3447967
[2025-07-27 00:39:18] 2025-07-26 21:29:53,928 | INFO     | intersect: -2429465890.3447967
[2025-07-27 00:39:18] 2025-07-26 21:29:53,928 | INFO     | chi2: 2.812075750088447
[2025-07-27 00:39:18] 2025-07-26 21:29:53,929 | INFO     | sum of square deviations: 6103286527.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,931 | INFO     | sum of deviations: 26636855207.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,931 | INFO     | mean x: 1753556764.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,931 | INFO     | mean y: 2501012.9296296295
[2025-07-27 00:39:18] 2025-07-26 21:29:53,931 | INFO     | -- intersect: -7650627743.791464
[2025-07-27 00:39:18] 2025-07-26 21:29:53,932 | INFO     | intersect: -7650627743.791464
[2025-07-27 00:39:18] 2025-07-26 21:29:53,932 | INFO     | chi2: 2.0511779894291604
[2025-07-27 00:39:18] 2025-07-26 21:29:53,932 | INFO     | current chi2=2.0511779894291604 (change=27.05822418316272 %)
[2025-07-27 00:39:18] 2025-07-26 21:29:53,933 | INFO     | sum of square deviations: 5770452380.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,935 | INFO     | sum of deviations: 25974160693.000034
[2025-07-27 00:39:18] 2025-07-26 21:29:53,935 | INFO     | mean x: 1753556612.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,935 | INFO     | mean y: 2500709.279245283
[2025-07-27 00:39:18] 2025-07-26 21:29:53,935 | INFO     | -- intersect: -7890669223.5017805
[2025-07-27 00:39:18] 2025-07-26 21:29:53,935 | INFO     | intersect: -7890669223.5017805
[2025-07-27 00:39:18] 2025-07-26 21:29:53,936 | INFO     | chi2: 2.052034563869104
[2025-07-27 00:39:18] 2025-07-26 21:29:53,936 | INFO     | current chi2=2.052034563869104 (change=-0.041760122444673156 %)
[2025-07-27 00:39:18] 2025-07-26 21:29:53,936 | INFO     | right removable region: 264
[2025-07-27 00:39:18] 2025-07-26 21:29:53,936 | INFO     | sum of square deviations: 6103286527.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,939 | INFO     | sum of deviations: -44108921361.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,939 | INFO     | mean x: 1753557069.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,952 | INFO     | mean y: 2516590.5222222223
[2025-07-27 00:39:18] 2025-07-26 21:29:53,953 | INFO     | -- intersect: 12675608462.08484
[2025-07-27 00:39:18] 2025-07-26 21:29:53,953 | INFO     | intersect: 12675608462.08484
[2025-07-27 00:39:18] 2025-07-26 21:29:53,953 | INFO     | chi2: 0.9281035109918649
[2025-07-27 00:39:18] 2025-07-26 21:29:53,953 | INFO     | current chi2=0.9281035109918649 (change=66.99578555226779 %)
[2025-07-27 00:39:18] 2025-07-26 21:29:53,954 | INFO     | sum of square deviations: 5770452380.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,956 | INFO     | sum of deviations: -42222082995.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,957 | INFO     | mean x: 1753557222.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,957 | INFO     | mean y: 2515701.99245283
[2025-07-27 00:39:18] 2025-07-26 21:29:53,957 | INFO     | -- intersect: 12833197542.532248
[2025-07-27 00:39:18] 2025-07-26 21:29:53,957 | INFO     | intersect: 12833197542.532248
[2025-07-27 00:39:18] 2025-07-26 21:29:53,957 | INFO     | chi2: 0.9158932942579219
[2025-07-27 00:39:18] 2025-07-26 21:29:53,957 | INFO     | current chi2=0.9158932942579219 (change=1.3156093678488514 %)
[2025-07-27 00:39:18] 2025-07-26 21:29:53,958 | INFO     | left removable region: 20
[2025-07-27 00:39:18] 2025-07-26 21:29:53,958 | INFO     | sum of square deviations: 4504437945.0
[2025-07-27 00:39:18] 2025-07-26 21:29:53,960 | INFO     | sum of deviations: -7153435565.499991
[2025-07-27 00:39:18] 2025-07-26 21:29:53,960 | INFO     | mean x: 1753557191.5
[2025-07-27 00:39:18] 2025-07-26 21:29:53,960 | INFO     | mean y: 2515405.4959016396
[2025-07-27 00:39:18] 2025-07-26 21:29:53,960 | INFO     | -- intersect: 2787315314.6029587
[2025-07-27 00:39:18] 2025-07-26 21:29:53,960 | INFO     | intersect: 2787315314.6029587
[2025-07-27 00:39:18] 2025-07-26 21:29:53,961 | INFO     | chi2: 0.07360752610758003
[2025-07-27 00:39:18] 2025-07-26 21:29:53,961 | INFO     | -- intersect: 2787315314.6029587
[2025-07-27 00:39:18] 2025-07-26 21:29:53,961 | INFO     | current memory leak: -1.59 B/s (using 244 data points, chi2=0.07)
[2025-07-27 00:39:18] 2025-07-26 21:29:53,962 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 00:39:18] 2025-07-26 21:29:53,962 | INFO     | ..............................
[2025-07-27 00:39:18] 2025-07-26 21:29:53,962 | INFO     | . Timing measurements:
[2025-07-27 00:39:18] 2025-07-26 21:29:53,962 | INFO     | . get job = 0 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,962 | INFO     | . initial setup = 2 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,963 | INFO     | . payload setup = 14 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,963 | INFO     | . stage-in = 0 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,963 | INFO     | . payload execution = 16750 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,963 | INFO     | . stage-out = 4 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,963 | INFO     | . log creation = 1 s
[2025-07-27 00:39:18] 2025-07-26 21:29:53,963 | INFO     | ..............................
[2025-07-27 00:39:18] 2025-07-26 21:29:54,118 | INFO     | 
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | job summary report
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | --------------------------------------------------
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | PanDA job id: 6745062477
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | task id: 45743349
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | errors: (none)
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | pilot state: finished 
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | transexitcode: 0
[2025-07-27 00:39:18] 2025-07-26 21:29:54,119 | INFO     | exeerrorcode: 0
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | exeerrordiag: 
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | exitcode: 0
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | exitmsg: OK
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | cpuconsumptiontime: 65234 s
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | nevents: 400
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | neventsw: 0
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | pid: 10820
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | pgrp: 10820
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | corecount: 8
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | event service: False
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | sizes: {0: 2397302, 1: 2397501, 11: 2397763, 12: 2397791, 16769: 2428993, 16770: 2428992, 16774: 2438176, 16776: 2438232, 16875: 2438426}
[2025-07-27 00:39:18] 2025-07-26 21:29:54,120 | INFO     | --------------------------------------------------
[2025-07-27 00:39:18] 2025-07-26 21:29:54,121 | INFO     | 
[2025-07-27 00:39:18] 2025-07-26 21:29:54,121 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-07-27 00:39:18] 2025-07-26 21:29:54,690 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,690 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,690 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,690 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,692 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 00:39:18] 2025-07-26 21:29:54,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,692 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 00:39:18] 2025-07-26 21:29:54,692 | INFO     | job 6745062477 has completed (purged errors)
[2025-07-27 00:39:18] 2025-07-26 21:29:54,692 | INFO     | overall cleanup function is called
[2025-07-27 00:39:18] 2025-07-26 21:29:55,701 | INFO     | --- collectZombieJob: --- 10, [10820]
[2025-07-27 00:39:18] 2025-07-26 21:29:55,702 | INFO     | zombie collector waiting for pid 10820
[2025-07-27 00:39:18] 2025-07-26 21:29:55,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 00:39:18] 2025-07-26 21:29:55,702 | INFO     | collected zombie processes
[2025-07-27 00:39:18] 2025-07-26 21:29:55,702 | INFO     | will attempt to kill all subprocesses of pid=10820
[2025-07-27 00:39:18] 2025-07-26 21:29:55,850 | INFO     | process IDs to be killed: [10820] (in reverse order)
[2025-07-27 00:39:18] 2025-07-26 21:29:56,549 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 00:39:18] 2025-07-26 21:29:56,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 00:39:18] 2025-07-26 21:29:56,553 | INFO     | did not find any defunct processes belonging to 10820
[2025-07-27 00:39:18] 2025-07-26 21:29:56,555 | INFO     | did not find any defunct processes belonging to 10820
[2025-07-27 00:39:18] 2025-07-26 21:29:56,556 | INFO     | ready for new job
[2025-07-27 00:39:18] 2025-07-26 21:29:56,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 00:39:18] 2025-07-26 21:29:56,558 | INFO     | ***************************************
[2025-07-27 00:39:18] 2025-07-26 21:29:56,558 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 00:39:18] 2025-07-26 21:29:56,558 | INFO     | ***************************************
[2025-07-27 00:39:18] 2025-07-26 21:29:56,558 | INFO     | 
[2025-07-27 00:39:18] 2025-07-26 21:29:56,559 | INFO     | pilot is running in a VM
[2025-07-27 00:39:18] 2025-07-26 21:29:56,559 | INFO     | architecture information:
[2025-07-27 00:39:18] 2025-07-26 21:29:56,567 | INFO     | executing command: cat /etc/os-release
[2025-07-27 00:39:18] 2025-07-26 21:29:56,813 | INFO     | cat /etc/os-release:
[2025-07-27 00:39:18] NAME="CentOS Linux"
[2025-07-27 00:39:18] VERSION="7 (Core)"
[2025-07-27 00:39:18] ID="centos"
[2025-07-27 00:39:18] ID_LIKE="rhel fedora"
[2025-07-27 00:39:18] VERSION_ID="7"
[2025-07-27 00:39:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 00:39:18] ANSI_COLOR="0;31"
[2025-07-27 00:39:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 00:39:18] HOME_URL="https://www.centos.org/"
[2025-07-27 00:39:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 00:39:18] 
[2025-07-27 00:39:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 00:39:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 00:39:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 00:39:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 00:39:18] 
[2025-07-27 00:39:18] 2025-07-26 21:29:56,813 | INFO     | ***************************************
[2025-07-27 00:39:18] 2025-07-26 21:29:57,317 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-07-27 00:39:18] 2025-07-26 21:29:57,602 | INFO     | sufficient remaining disk space (496360226816 B)
[2025-07-27 00:39:18] 2025-07-26 21:29:57,603 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 00:39:18] 2025-07-26 21:29:57,603 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 00:39:18] 2025-07-26 21:29:57,603 | INFO     | update_server=False
[2025-07-27 00:39:18] 2025-07-26 21:29:57,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 00:39:18] 2025-07-26 21:29:57,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 00:39:18] 2025-07-26 21:29:57,947 | INFO     | all payload control threads have been joined
[2025-07-27 00:39:18] 2025-07-26 21:29:58,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:39:18] 2025-07-26 21:29:58,169 | INFO     | aborting loop
[2025-07-27 00:39:18] 2025-07-26 21:29:58,343 | INFO     | all data control threads have been joined
[2025-07-27 00:39:18] 2025-07-26 21:29:58,610 | INFO     | [job] retrieve thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:58,616 | INFO     | all job control threads have been joined
[2025-07-27 00:39:18] 2025-07-26 21:29:58,620 | INFO     | [job] validate thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:58,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:58,954 | INFO     | [payload] control thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:58,990 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 00:39:18] 2025-07-26 21:29:59,175 | INFO     | [job] job monitor thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,293 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,350 | INFO     | [data] control thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,417 | INFO     | [payload] validate_post thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,609 | INFO     | [payload] failed_post thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,613 | INFO     | [data] copytool_out thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,623 | INFO     | [job] control thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,869 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:29:59,986 | INFO     | [data] copytool_in thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:30:00,139 | INFO     | [job] queue monitor thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:30:01,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 00:39:18] 2025-07-26 21:30:05,051 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 00:39:18] 2025-07-26 21:30:05,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823754532672)>', '<ExcThread(monitor, started 139822651926272)>']
[2025-07-27 00:39:18] 2025-07-26 21:30:10,203 | INFO     | all workflow threads have been joined
[2025-07-27 00:39:18] 2025-07-26 21:30:10,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 00:39:18] 2025-07-26 21:30:10,204 | INFO     | traces error code: 0
[2025-07-27 00:39:18] 2025-07-26 21:30:10,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 00:39:18] 2025-07-26 21:30:26,640 | INFO     | PID=4096 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-27 00:39:18] 2025-07-26 21:30:26,641 | INFO     | .. there are 9 such processes running
[2025-07-27 00:39:18] 2025-07-26 21:30:26,642 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 00:39:18] 2025-07-26 21:30:26,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 00:39:18] 2025-07-26 21:30:26,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 00:39:18] 2025-07-26 21:30:26,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 00:39:18] 2025-07-26 21:30:26,642 | CRITICAL | thread 'MainThread' is not alive
[2025-07-27 00:39:18] 2025-07-26 21:30:26,642 | INFO     | [monitor] control thread has ended
[2025-07-27 00:39:18] 2025-07-26 21:30:27,060 [wrapper] ==== pilot stdout END ====
[2025-07-27 00:39:18] 2025-07-26 21:30:27,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 00:39:18] 2025-07-26 21:30:27,279 [wrapper] pilotpid: 4096
[2025-07-27 00:39:18] 2025-07-26 21:30:27,380 [wrapper] Pilot exit status: 0
[2025-07-27 00:39:18] 2025-07-26 21:30:27,831 [wrapper] pandaids: 6745062477
[2025-07-27 00:39:18] 2025-07-26 21:30:28,346 [wrapper] cleanup supervisor_pilot 22956 4097
[2025-07-27 00:39:18] 2025-07-26 21:30:28,431 [wrapper] Test setup, not cleaning
[2025-07-27 00:39:18] 2025-07-26 21:30:28,479 [wrapper] apfmon messages muted
[2025-07-27 00:39:18] 2025-07-26 21:30:28,521 [wrapper] ==== wrapper stdout END ====
[2025-07-27 00:39:18] 2025-07-26 21:30:28,575 [wrapper] ==== wrapper stderr END ====
[2025-07-27 00:39:18]  *** Error codes and diagnostics ***
[2025-07-27 00:39:18]     "exeErrorCode": 0,
[2025-07-27 00:39:18]     "exeErrorDiag": "",
[2025-07-27 00:39:18]     "pilotErrorCode": 0,
[2025-07-27 00:39:18]     "pilotErrorDiag": "",
[2025-07-27 00:39:18]  *** Listing of results directory ***
[2025-07-27 00:39:18] total 357764
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc    530466 Jul 25 23:12 pilot3.tar.gz
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc      5112 Jul 25 23:14 queuedata.json
[2025-07-27 00:39:18] -rwx------. 1 boinc boinc     36292 Jul 25 23:15 runpilot2-wrapper.sh
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc       100 Jul 26 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 00:39:18] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 18:47 run_atlas
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc       105 Jul 26 18:47 job.xml
[2025-07-27 00:39:18] -rw-r--r--. 2 boinc boinc 144093970 Jul 26 18:47 EVNT.45743347._001517.pool.root.1
[2025-07-27 00:39:18] -rw-r--r--. 2 boinc boinc     15095 Jul 26 18:47 start_atlas.sh
[2025-07-27 00:39:18] drwxrwx--x. 2 boinc boinc        68 Jul 26 18:47 shared
[2025-07-27 00:39:18] -rw-r--r--. 2 boinc boinc    542895 Jul 26 18:47 input.tar.gz
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc      6392 Jul 26 18:47 init_data.xml
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc         0 Jul 26 18:47 boinc_lockfile
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc      2561 Jul 26 18:47 pandaJob.out
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc    980117 Jul 26 18:48 agis_schedconf.cvmfs.json
[2025-07-27 00:39:18] drwx------. 4 boinc boinc      4096 Jul 26 18:48 pilot3
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc 214685152 Jul 26 23:26 HITS.45743349._027358.pool.root.1
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc       531 Jul 26 23:27 boinc_task_state.xml
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc      1015 Jul 26 23:28 memory_monitor_summary.json
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc   1593052 Jul 26 23:28 agis_ddmendpoints.agis.ALL.json
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc    398506 Jul 26 23:28 log.45743349._027358.job.log.tgz.1
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc      7776 Jul 26 23:29 heartbeat.json
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc        95 Jul 26 23:30 pilot_heartbeat.json
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc       889 Jul 26 23:30 pilotlog.txt
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc   1451369 Jul 26 23:30 log.45743349._027358.job.log.1
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc       357 Jul 26 23:30 output.list
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc       620 Jul 26 23:30 runtime_log
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc   1873920 Jul 26 23:30 result.tar.gz
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc       656 Jul 26 23:30 xzOODmdwez7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgczKDmhOOHdn.diag
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc      8674 Jul 26 23:30 runtime_log.err
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc      8192 Jul 27 00:39 boinc_mmap_file
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc        28 Jul 27 00:39 wrapper_checkpoint.txt
[2025-07-27 00:39:18] -rw-r--r--. 1 boinc boinc     20586 Jul 27 00:39 stderr.txt
[2025-07-27 00:39:18] HITS file was successfully produced:
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc 214685152 Jul 26 23:26 shared/HITS.pool.root.1
[2025-07-27 00:39:18]  *** Contents of shared directory: ***
[2025-07-27 00:39:18] total 352756
[2025-07-27 00:39:18] -rw-r--r--. 2 boinc boinc 144093970 Jul 26 18:47 ATLAS.root_0
[2025-07-27 00:39:18] -rw-r--r--. 2 boinc boinc     15095 Jul 26 18:47 start_atlas.sh
[2025-07-27 00:39:18] -rw-r--r--. 2 boinc boinc    542895 Jul 26 18:47 input.tar.gz
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc 214685152 Jul 26 23:26 HITS.pool.root.1
[2025-07-27 00:39:18] -rw-------. 1 boinc boinc   1873920 Jul 26 23:30 result.tar.gz
00:39:20 (32741): run_atlas exited; CPU time 65440.864330
00:39:20 (32741): called boinc_finish(0)

</stderr_txt>
]]>

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