Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:43:03 (50120): wrapper (7.7.26015): starting
05:43:03 (50120): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 05:43:03] Arguments: --nthreads 12
[2025-07-26 05:43:03] Threads: 12
[2025-07-26 05:43:03] Checking for CVMFS
[2025-07-26 05:43:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 05:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 05:43:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 05:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 05:43:04] 2.12.6.0 951823 16757 289324 148772 2 65 31287266 40960001 17963 16776704 0 38384102 99.708 49624917 27889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 05:43:04] CVMFS is ok
[2025-07-26 05:43:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 05:43:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 05:43:04] Further information can be found at the LHC@home message board.
[2025-07-26 05:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 05:43:04] Checking for apptainer binary...
[2025-07-26 05:43:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 05:43:04] Running /usr/bin/apptainer --version
[2025-07-26 05:43:04] apptainer version 1.4.1-1.el9
[2025-07-26 05:43:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 05:43:05] c6-8-12-3.aglt2.org
[2025-07-26 05:43:05] apptainer works
[2025-07-26 05:43:05] Set ATHENA_PROC_NUMBER=12
[2025-07-26 05:43:05] Set ATHENA_CORE_NUMBER=12
[2025-07-26 05:43:05] Starting ATLAS job with PandaID=6745069097
[2025-07-26 05:43:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 07:48:10]  *** The last 200 lines of the pilot log: ***
[2025-07-26 07:48:11] 2025-07-26 11:47:35,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,726 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 07:48:11] 2025-07-26 11:47:37,732 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2830.8290357142855
[2025-07-26 07:48:11] 2025-07-26 11:47:37,740 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745069097/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,741 | INFO     | extracted standard info from prmon json
[2025-07-26 07:48:11] 2025-07-26 11:47:37,741 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 07:48:11] 2025-07-26 11:47:37,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 07:48:11] 2025-07-26 11:47:37,742 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 07:48:11] 2025-07-26 11:47:37,742 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 07:48:11] 2025-07-26 11:47:37,744 | INFO     | fitting pss+swap vs Time
[2025-07-26 07:48:11] 2025-07-26 11:47:37,744 | INFO     | sum of square deviations: 549306485.5206604
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | sum of deviations: 3909136948.909094
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | mean x: 1753526734.768595
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | mean y: 2349562.8181818184
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | -- intersect: -12476614968.770279
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | intersect: -12476614968.770279
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | chi2: 1.8248897366973431
[2025-07-26 07:48:11] 2025-07-26 11:47:37,745 | INFO     | sum of square deviations: 483990673.17241406
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | sum of deviations: 4041186908.5172377
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | mean x: 1753526582.275862
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | mean y: 2349885.327586207
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | -- intersect: -14639107193.961617
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | intersect: -14639107193.961617
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | chi2: 1.826568749808986
[2025-07-26 07:48:11] 2025-07-26 11:47:37,746 | INFO     | current chi2=1.826568749808986 (change=-0.09200627730426718 %)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | right removable region: 115
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | sum of square deviations: 483955962.43965524
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | sum of deviations: -14730492244.974136
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | mean x: 1753526887.3017242
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | mean y: 2392420.370689655
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | -- intersect: 53375666477.2483
[2025-07-26 07:48:11] 2025-07-26 11:47:37,747 | INFO     | intersect: 53375666477.2483
[2025-07-26 07:48:11] 2025-07-26 11:47:37,748 | INFO     | chi2: 0.2717289020498267
[2025-07-26 07:48:11] 2025-07-26 11:47:37,748 | INFO     | current chi2=0.2717289020498267 (change=85.10984545610974 %)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,748 | INFO     | sum of square deviations: 424028951.6396395
[2025-07-26 07:48:11] 2025-07-26 11:47:37,748 | INFO     | sum of deviations: -11924456522.27928
[2025-07-26 07:48:11] 2025-07-26 11:47:37,748 | INFO     | mean x: 1753527039.801802
[2025-07-26 07:48:11] 2025-07-26 11:47:37,748 | INFO     | mean y: 2385119.396396396
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | -- intersect: 49314718312.45603
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | intersect: 49314718312.45603
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | chi2: 0.2431135852962332
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | current chi2=0.2431135852962332 (change=10.530832950683445 %)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | left removable region: 20
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | sum of square deviations: 265816542.58947372
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | sum of deviations: 78938366.07368407
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | mean x: 1753527161.8105264
[2025-07-26 07:48:11] 2025-07-26 11:47:37,749 | INFO     | mean y: 2350914.7263157894
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | -- intersect: -518386311.2969866
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | intersect: -518386311.2969866
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | chi2: 0.07647697858152955
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | -- intersect: -518386311.2969866
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | current memory leak: 0.30 B/s (using 95 data points, chi2=0.08)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | could have reported an average CPU frequency of 2779 MHz (8 samples)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,750 | INFO     | ..............................
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . Timing measurements:
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . get job = 0 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . initial setup = 3 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . payload setup = 18 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . stage-in = 0 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . payload execution = 7375 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . stage-out = 1 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | . log creation = 0 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,751 | INFO     | ..............................
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | 
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | job summary report
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | --------------------------------------------------
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | PanDA job id: 6745069097
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | task id: 45743349
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | errors: (none)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 07:48:11] 2025-07-26 11:47:37,882 | INFO     | pilot state: finished 
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | transexitcode: 0
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | exeerrorcode: 0
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | exeerrordiag: 
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | exitcode: 0
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | exitmsg: OK
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | cpuconsumptiontime: 43981 s
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | nevents: 400
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | neventsw: 0
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | pid: 63257
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | pgrp: 63257
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | corecount: 12
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | event service: False
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | sizes: {0: 2397475, 11: 2397475, 13: 2397765, 22: 2397821, 7397: 2425177, 7399: 2434359, 7412: 2434497}
[2025-07-26 07:48:11] 2025-07-26 11:47:37,883 | INFO     | --------------------------------------------------
[2025-07-26 07:48:11] 2025-07-26 11:47:37,884 | INFO     | 
[2025-07-26 07:48:11] 2025-07-26 11:47:37,884 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 07:48:11] 2025-07-26 11:47:37,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 07:48:11] 2025-07-26 11:47:37,922 | INFO     | job 6745069097 has completed (purged errors)
[2025-07-26 07:48:11] 2025-07-26 11:47:37,922 | INFO     | overall cleanup function is called
[2025-07-26 07:48:11] 2025-07-26 11:47:38,932 | INFO     | --- collectZombieJob: --- 10, [63257]
[2025-07-26 07:48:11] 2025-07-26 11:47:38,932 | INFO     | zombie collector waiting for pid 63257
[2025-07-26 07:48:11] 2025-07-26 11:47:38,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 07:48:11] 2025-07-26 11:47:38,932 | INFO     | collected zombie processes
[2025-07-26 07:48:11] 2025-07-26 11:47:38,932 | INFO     | will attempt to kill all subprocesses of pid=63257
[2025-07-26 07:48:11] 2025-07-26 11:47:39,339 | INFO     | process IDs to be killed: [63257] (in reverse order)
[2025-07-26 07:48:11] 2025-07-26 11:47:39,483 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 07:48:11] 2025-07-26 11:47:39,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 07:48:11] 2025-07-26 11:47:39,500 | INFO     | did not find any defunct processes belonging to 63257
[2025-07-26 07:48:11] 2025-07-26 11:47:39,515 | INFO     | did not find any defunct processes belonging to 63257
[2025-07-26 07:48:11] 2025-07-26 11:47:39,515 | INFO     | ready for new job
[2025-07-26 07:48:11] 2025-07-26 11:47:39,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 07:48:11] 2025-07-26 11:47:39,517 | INFO     | ***************************************
[2025-07-26 07:48:11] 2025-07-26 11:47:39,517 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 07:48:11] 2025-07-26 11:47:39,517 | INFO     | ***************************************
[2025-07-26 07:48:11] 2025-07-26 11:47:39,517 | INFO     | 
[2025-07-26 07:48:11] 2025-07-26 11:47:39,533 | INFO     | architecture information:
[2025-07-26 07:48:11] 2025-07-26 11:47:39,538 | INFO     | executing command: cat /etc/os-release
[2025-07-26 07:48:11] 2025-07-26 11:47:39,583 | INFO     | cat /etc/os-release:
[2025-07-26 07:48:11] NAME="CentOS Linux"
[2025-07-26 07:48:11] VERSION="7 (Core)"
[2025-07-26 07:48:11] ID="centos"
[2025-07-26 07:48:11] ID_LIKE="rhel fedora"
[2025-07-26 07:48:11] VERSION_ID="7"
[2025-07-26 07:48:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 07:48:11] ANSI_COLOR="0;31"
[2025-07-26 07:48:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 07:48:11] HOME_URL="https://www.centos.org/"
[2025-07-26 07:48:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 07:48:11] 
[2025-07-26 07:48:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 07:48:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 07:48:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 07:48:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 07:48:11] 
[2025-07-26 07:48:11] 2025-07-26 11:47:39,583 | INFO     | ***************************************
[2025-07-26 07:48:11] 2025-07-26 11:47:40,087 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 07:48:11] 2025-07-26 11:47:40,144 | INFO     | sufficient remaining disk space (56466866176 B)
[2025-07-26 07:48:11] 2025-07-26 11:47:40,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 07:48:11] 2025-07-26 11:47:40,145 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 07:48:11] 2025-07-26 11:47:40,145 | INFO     | update_server=False
[2025-07-26 07:48:11] 2025-07-26 11:47:40,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 07:48:11] 2025-07-26 11:47:40,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 07:48:11] 2025-07-26 11:47:40,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 07:48:11] 2025-07-26 11:47:40,228 | INFO     | all payload control threads have been joined
[2025-07-26 07:48:11] 2025-07-26 11:47:40,313 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 07:48:11] 2025-07-26 11:47:40,313 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 07:48:11] 2025-07-26 11:47:40,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:48:11] 2025-07-26 11:47:40,314 | INFO     | will abort loop
[2025-07-26 07:48:11] 2025-07-26 11:47:40,384 | INFO     | all data control threads have been joined
[2025-07-26 07:48:11] 2025-07-26 11:47:40,780 | INFO     | all job control threads have been joined
[2025-07-26 07:48:11] 2025-07-26 11:47:41,151 | INFO     | [job] retrieve thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:41,234 | INFO     | [payload] control thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:41,320 | INFO     | [job] job monitor thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:41,389 | INFO     | [data] control thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:41,691 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:41,786 | INFO     | [job] control thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:41,869 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,040 | INFO     | [data] copytool_in thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,059 | INFO     | [payload] validate_post thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,067 | INFO     | [job] validate thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,153 | INFO     | [data] copytool_out thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,243 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,316 | INFO     | [payload] failed_post thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:42,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 07:48:11] 2025-07-26 11:47:43,903 | INFO     | [job] queue monitor thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:44,161 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:50,867 | INFO     | job.realtimelogging is not enabled
[2025-07-26 07:48:11] 2025-07-26 11:47:51,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 07:48:11] 2025-07-26 11:47:52,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094492600128)>', '<ExcThread(monitor, started 140094149211904)>']
[2025-07-26 07:48:11] 2025-07-26 11:47:57,924 | INFO     | all workflow threads have been joined
[2025-07-26 07:48:11] 2025-07-26 11:47:57,924 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 07:48:11] 2025-07-26 11:47:57,924 | INFO     | traces error code: 0
[2025-07-26 07:48:11] 2025-07-26 11:47:57,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 07:48:11] 2025-07-26 11:48:10,134 | INFO     | PID=55176 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 07:48:11] 2025-07-26 11:48:10,135 | INFO     | .. there are 34 such processes running
[2025-07-26 07:48:11] 2025-07-26 11:48:10,136 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 07:48:11] 2025-07-26 11:48:10,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 07:48:11] 2025-07-26 11:48:10,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 07:48:11] 2025-07-26 11:48:10,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 07:48:11] 2025-07-26 11:48:10,136 | INFO     | [monitor] control thread has ended
[2025-07-26 07:48:11] 2025-07-26 11:48:10,326 [wrapper] ==== pilot stdout END ====
[2025-07-26 07:48:11] 2025-07-26 11:48:10,338 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 07:48:11] 2025-07-26 11:48:10,346 [wrapper] pilotpid: 55176
[2025-07-26 07:48:11] 2025-07-26 11:48:10,360 [wrapper] Pilot exit status: 0
[2025-07-26 07:48:11] 2025-07-26 11:48:10,459 [wrapper] pandaids: 6745069097
[2025-07-26 07:48:11] 2025-07-26 11:48:10,757 [wrapper] cleanup supervisor_pilot  508484 55177
[2025-07-26 07:48:11] 2025-07-26 11:48:10,771 [wrapper] Test setup, not cleaning
[2025-07-26 07:48:11] 2025-07-26 11:48:10,775 [wrapper] apfmon messages muted
[2025-07-26 07:48:11] 2025-07-26 11:48:10,778 [wrapper] ==== wrapper stdout END ====
[2025-07-26 07:48:11] 2025-07-26 11:48:10,781 [wrapper] ==== wrapper stderr END ====
[2025-07-26 07:48:11]  *** Error codes and diagnostics ***
[2025-07-26 07:48:11]     "exeErrorCode": 0,
[2025-07-26 07:48:11]     "exeErrorDiag": "",
[2025-07-26 07:48:11]     "pilotErrorCode": 0,
[2025-07-26 07:48:11]     "pilotErrorDiag": "",
[2025-07-26 07:48:11]  *** Listing of results directory ***
[2025-07-26 07:48:11] total 351088
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 21:05 pilot3.tar.gz
[2025-07-26 07:48:11] -rwx------. 1 boincer umatlas     36292 Jul 25 21:14 runpilot2-wrapper.sh
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 21:14 queuedata.json
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas       100 Jul 26 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 07:48:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 05:43 run_atlas
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas       105 Jul 26 05:43 job.xml
[2025-07-26 07:48:11] -rw-r--r--. 2 boincer umatlas 148121437 Jul 26 05:43 EVNT.45743347._001680.pool.root.1
[2025-07-26 07:48:11] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 05:43 start_atlas.sh
[2025-07-26 07:48:11] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 05:43 shared
[2025-07-26 07:48:11] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 05:43 input.tar.gz
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas         0 Jul 26 05:43 boinc_lockfile
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 05:43 pandaJob.out
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas    980133 Jul 26 05:43 agis_schedconf.cvmfs.json
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas   1593052 Jul 26 05:43 agis_ddmendpoints.agis.ALL.json
[2025-07-26 07:48:11] drwx------. 4 boincer umatlas      4096 Jul 26 05:43 pilot3
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas      6842 Jul 26 07:37 init_data.xml
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas 205453854 Jul 26 07:46 HITS.45743349._030025.pool.root.1
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas       530 Jul 26 07:46 boinc_task_state.xml
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas      1045 Jul 26 07:47 memory_monitor_summary.json
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas    386329 Jul 26 07:47 log.45743349._030025.job.log.tgz.1
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas      7830 Jul 26 07:47 heartbeat.json
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas        27 Jul 26 07:47 wrapper_checkpoint.txt
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas        95 Jul 26 07:48 pilot_heartbeat.json
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas       821 Jul 26 07:48 pilotlog.txt
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas    644225 Jul 26 07:48 log.45743349._030025.job.log.1
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas       357 Jul 26 07:48 output.list
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas       620 Jul 26 07:48 runtime_log
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas   1054720 Jul 26 07:48 result.tar.gz
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas      8667 Jul 26 07:48 runtime_log.err
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas       655 Jul 26 07:48 foBODmpfiz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrszKDm1R5q6n.diag
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 07:48 boinc_mmap_file
[2025-07-26 07:48:11] -rw-r--r--. 1 boincer umatlas     21162 Jul 26 07:48 stderr.txt
[2025-07-26 07:48:11] HITS file was successfully produced:
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas 205453854 Jul 26 07:46 shared/HITS.pool.root.1
[2025-07-26 07:48:11]  *** Contents of shared directory: ***
[2025-07-26 07:48:11] total 346872
[2025-07-26 07:48:11] -rw-r--r--. 2 boincer umatlas 148121437 Jul 26 05:43 ATLAS.root_0
[2025-07-26 07:48:11] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 05:43 start_atlas.sh
[2025-07-26 07:48:11] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 05:43 input.tar.gz
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas 205453854 Jul 26 07:46 HITS.pool.root.1
[2025-07-26 07:48:11] -rw-------. 1 boincer umatlas   1054720 Jul 26 07:48 result.tar.gz
07:48:32 (50120): run_atlas exited; CPU time 44113.285044
07:48:32 (50120): called boinc_finish(0)

</stderr_txt>
]]>

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