Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:10:53 (4032092): wrapper (7.7.26015): starting
03:10:53 (4032092): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 03:10:53] Arguments: --nthreads 8
[2025-07-26 03:10:53] Threads: 8
[2025-07-26 03:10:53] Checking for CVMFS
[2025-07-26 03:10:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 03:10:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 03:10:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 03:10:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 03:10:54] 2.13.1.0 133096 6411 211996 148767 3 528 29639121 40960001 13688 16776704 0 19046467 99.810 15481268 18867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 03:10:54] CVMFS is ok
[2025-07-26 03:10:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 03:10:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 03:10:54] Further information can be found at the LHC@home message board.
[2025-07-26 03:10:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 03:10:54] Checking for apptainer binary...
[2025-07-26 03:10:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 03:10:54] Running /usr/bin/apptainer --version
[2025-07-26 03:10:54] apptainer version 1.4.1-1.el9
[2025-07-26 03:10:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 03:10:54] c-211-35-3.aglt2.org
[2025-07-26 03:10:54] apptainer works
[2025-07-26 03:10:54] Set ATHENA_PROC_NUMBER=8
[2025-07-26 03:10:54] Set ATHENA_CORE_NUMBER=8
[2025-07-26 03:10:54] Starting ATLAS job with PandaID=6745068674
[2025-07-26 03:10:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:29:45]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:29:45] 2025-07-26 09:29:10,423 | INFO     | PID=4036026 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 05:29:45] 2025-07-26 09:29:10,423 | INFO     | .. there are 15 such processes running
[2025-07-26 05:29:45] 2025-07-26 09:29:10,771 | INFO     | monitor loop #588: job 0:6745068674 is in state 'finished'
[2025-07-26 05:29:45] 2025-07-26 09:29:10,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,469 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 05:29:45] 2025-07-26 09:29:11,491 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2525.9011562499995
[2025-07-26 05:29:45] 2025-07-26 09:29:11,521 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745068674/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,525 | INFO     | extracted standard info from prmon json
[2025-07-26 05:29:45] 2025-07-26 09:29:11,525 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:29:45] 2025-07-26 09:29:11,525 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:29:45] 2025-07-26 09:29:11,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:29:45] 2025-07-26 09:29:11,526 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:29:45] 2025-07-26 09:29:11,530 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:29:45] 2025-07-26 09:29:11,530 | INFO     | sum of square deviations: 762879300.9333338
[2025-07-26 05:29:45] 2025-07-26 09:29:11,531 | INFO     | sum of deviations: 9401092960.911108
[2025-07-26 05:29:45] 2025-07-26 09:29:11,531 | INFO     | mean x: 1753517993.0222223
[2025-07-26 05:29:45] 2025-07-26 09:29:11,531 | INFO     | mean y: 2542144.696296296
[2025-07-26 05:29:45] 2025-07-26 09:29:11,531 | INFO     | -- intersect: -21606361964.857952
[2025-07-26 05:29:45] 2025-07-26 09:29:11,531 | INFO     | intersect: -21606361964.857952
[2025-07-26 05:29:45] 2025-07-26 09:29:11,531 | INFO     | chi2: 1.5855343421992163
[2025-07-26 05:29:45] 2025-07-26 09:29:11,532 | INFO     | sum of square deviations: 681213568.4307704
[2025-07-26 05:29:45] 2025-07-26 09:29:11,532 | INFO     | sum of deviations: 9308901005.476923
[2025-07-26 05:29:45] 2025-07-26 09:29:11,532 | INFO     | mean x: 1753517840.523077
[2025-07-26 05:29:45] 2025-07-26 09:29:11,532 | INFO     | mean y: 2541972.5076923077
[2025-07-26 05:29:45] 2025-07-26 09:29:11,533 | INFO     | -- intersect: -23959582015.082676
[2025-07-26 05:29:45] 2025-07-26 09:29:11,533 | INFO     | intersect: -23959582015.082676
[2025-07-26 05:29:45] 2025-07-26 09:29:11,534 | INFO     | chi2: 1.5877178630584767
[2025-07-26 05:29:45] 2025-07-26 09:29:11,534 | INFO     | current chi2=1.5877178630584767 (change=-0.13771514127103557 %)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,534 | INFO     | right removable region: 129
[2025-07-26 05:29:45] 2025-07-26 09:29:11,534 | INFO     | sum of square deviations: 681211738.4307704
[2025-07-26 05:29:45] 2025-07-26 09:29:11,535 | INFO     | sum of deviations: -13399134919.538462
[2025-07-26 05:29:45] 2025-07-26 09:29:11,535 | INFO     | mean x: 1753518145.523077
[2025-07-26 05:29:45] 2025-07-26 09:29:11,536 | INFO     | mean y: 2584123.846153846
[2025-07-26 05:29:45] 2025-07-26 09:29:11,536 | INFO     | -- intersect: 34493513874.77319
[2025-07-26 05:29:45] 2025-07-26 09:29:11,545 | INFO     | intersect: 34493513874.77319
[2025-07-26 05:29:45] 2025-07-26 09:29:11,545 | INFO     | chi2: 0.02297260734141105
[2025-07-26 05:29:45] 2025-07-26 09:29:11,545 | INFO     | current chi2=0.02297260734141105 (change=98.55111259781691 %)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,546 | INFO     | sum of square deviations: 605590800.9280019
[2025-07-26 05:29:45] 2025-07-26 09:29:11,546 | INFO     | sum of deviations: -13115115606.927996
[2025-07-26 05:29:45] 2025-07-26 09:29:11,547 | INFO     | mean x: 1753518298.024
[2025-07-26 05:29:45] 2025-07-26 09:29:11,547 | INFO     | mean y: 2583527.976
[2025-07-26 05:29:45] 2025-07-26 09:29:11,547 | INFO     | -- intersect: 37978053370.33006
[2025-07-26 05:29:45] 2025-07-26 09:29:11,547 | INFO     | intersect: 37978053370.33006
[2025-07-26 05:29:45] 2025-07-26 09:29:11,547 | INFO     | chi2: 0.01943497492626655
[2025-07-26 05:29:45] 2025-07-26 09:29:11,549 | INFO     | current chi2=0.01943497492626655 (change=15.3993508989616 %)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,549 | INFO     | left removable region: 20
[2025-07-26 05:29:45] 2025-07-26 09:29:11,549 | INFO     | sum of square deviations: 401530428.917431
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | sum of deviations: -9807504515.467894
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | mean x: 1753518420.027523
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | mean y: 2579143.1559633026
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | -- intersect: 42832807150.39002
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | intersect: 42832807150.39002
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | chi2: 0.01718776781246271
[2025-07-26 05:29:45] 2025-07-26 09:29:11,550 | INFO     | -- intersect: 42832807150.39002
[2025-07-26 05:29:45] 2025-07-26 09:29:11,551 | INFO     | current memory leak: -24.43 B/s (using 109 data points, chi2=0.02)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,551 | INFO     | could have reported an average CPU frequency of 2572 MHz (8 samples)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,551 | INFO     | ..............................
[2025-07-26 05:29:45] 2025-07-26 09:29:11,551 | INFO     | . Timing measurements:
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . get job = 0 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . initial setup = 2 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . payload setup = 11 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . stage-in = 0 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . payload execution = 8229 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . stage-out = 1 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | . log creation = 0 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,555 | INFO     | ..............................
[2025-07-26 05:29:45] 2025-07-26 09:29:11,765 | INFO     | 
[2025-07-26 05:29:45] 2025-07-26 09:29:11,766 | INFO     | job summary report
[2025-07-26 05:29:45] 2025-07-26 09:29:11,766 | INFO     | --------------------------------------------------
[2025-07-26 05:29:45] 2025-07-26 09:29:11,766 | INFO     | PanDA job id: 6745068674
[2025-07-26 05:29:45] 2025-07-26 09:29:11,766 | INFO     | task id: 45743349
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | errors: (none)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | pilot state: finished 
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | transexitcode: 0
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | exeerrorcode: 0
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | exeerrordiag: 
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | exitcode: 0
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | exitmsg: OK
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | cpuconsumptiontime: 53165 s
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | nevents: 400
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | neventsw: 0
[2025-07-26 05:29:45] 2025-07-26 09:29:11,767 | INFO     | pid: 4044214
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | pgrp: 4044214
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | corecount: 8
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | event service: False
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | sizes: {0: 2397475, 1: 2397475, 7: 2397765, 11: 2397793, 8244: 2425560, 8245: 2434558, 8249: 2434742, 8263: 2434936}
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | --------------------------------------------------
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | 
[2025-07-26 05:29:45] 2025-07-26 09:29:11,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 05:29:45] 2025-07-26 09:29:11,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:29:45] 2025-07-26 09:29:11,853 | INFO     | job 6745068674 has completed (purged errors)
[2025-07-26 05:29:45] 2025-07-26 09:29:11,853 | INFO     | overall cleanup function is called
[2025-07-26 05:29:45] 2025-07-26 09:29:12,877 | INFO     | --- collectZombieJob: --- 10, [4044214]
[2025-07-26 05:29:45] 2025-07-26 09:29:12,877 | INFO     | zombie collector waiting for pid 4044214
[2025-07-26 05:29:45] 2025-07-26 09:29:12,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:29:45] 2025-07-26 09:29:12,877 | INFO     | collected zombie processes
[2025-07-26 05:29:45] 2025-07-26 09:29:12,878 | INFO     | will attempt to kill all subprocesses of pid=4044214
[2025-07-26 05:29:45] 2025-07-26 09:29:13,411 | INFO     | process IDs to be killed: [4044214] (in reverse order)
[2025-07-26 05:29:45] 2025-07-26 09:29:13,603 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:29:45] 2025-07-26 09:29:13,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:29:45] 2025-07-26 09:29:13,623 | INFO     | did not find any defunct processes belonging to 4044214
[2025-07-26 05:29:45] 2025-07-26 09:29:13,637 | INFO     | did not find any defunct processes belonging to 4044214
[2025-07-26 05:29:45] 2025-07-26 09:29:13,638 | INFO     | ready for new job
[2025-07-26 05:29:45] 2025-07-26 09:29:13,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:29:45] 2025-07-26 09:29:13,644 | INFO     | ***************************************
[2025-07-26 05:29:45] 2025-07-26 09:29:13,644 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:29:45] 2025-07-26 09:29:13,644 | INFO     | ***************************************
[2025-07-26 05:29:45] 2025-07-26 09:29:13,644 | INFO     | 
[2025-07-26 05:29:45] 2025-07-26 09:29:13,655 | INFO     | architecture information:
[2025-07-26 05:29:45] 2025-07-26 09:29:13,656 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:29:45] 2025-07-26 09:29:13,674 | INFO     | cat /etc/os-release:
[2025-07-26 05:29:45] NAME="CentOS Linux"
[2025-07-26 05:29:45] VERSION="7 (Core)"
[2025-07-26 05:29:45] ID="centos"
[2025-07-26 05:29:45] ID_LIKE="rhel fedora"
[2025-07-26 05:29:45] VERSION_ID="7"
[2025-07-26 05:29:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:29:45] ANSI_COLOR="0;31"
[2025-07-26 05:29:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:29:45] HOME_URL="https://www.centos.org/"
[2025-07-26 05:29:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:29:45] 
[2025-07-26 05:29:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:29:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:29:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:29:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:29:45] 
[2025-07-26 05:29:45] 2025-07-26 09:29:13,675 | INFO     | ***************************************
[2025-07-26 05:29:45] 2025-07-26 09:29:14,178 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 05:29:45] 2025-07-26 09:29:14,202 | INFO     | sufficient remaining disk space (129014693888 B)
[2025-07-26 05:29:45] 2025-07-26 09:29:14,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:29:45] 2025-07-26 09:29:14,203 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:29:45] 2025-07-26 09:29:14,203 | INFO     | update_server=False
[2025-07-26 05:29:45] 2025-07-26 09:29:14,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:29:45] 2025-07-26 09:29:14,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:29:45] 2025-07-26 09:29:14,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:29:45] 2025-07-26 09:29:14,319 | INFO     | aborting loop
[2025-07-26 05:29:45] 2025-07-26 09:29:14,408 | INFO     | all data control threads have been joined
[2025-07-26 05:29:45] 2025-07-26 09:29:14,725 | INFO     | all payload control threads have been joined
[2025-07-26 05:29:45] 2025-07-26 09:29:15,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:29:45] 2025-07-26 09:29:15,209 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,325 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,414 | INFO     | [data] control thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,550 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,709 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,731 | INFO     | [payload] control thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,838 | INFO     | [job] validate thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:15,866 | INFO     | all job control threads have been joined
[2025-07-26 05:29:45] 2025-07-26 09:29:15,999 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:16,472 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:16,491 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:16,590 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:16,611 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:16,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:29:45] 2025-07-26 09:29:16,872 | INFO     | [job] control thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:17,032 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:17,789 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:18,213 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:29:45] 2025-07-26 09:29:19,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958537566016)>', '<ExcThread(monitor, started 139958052435712)>']
[2025-07-26 05:29:45] 2025-07-26 09:29:24,247 | INFO     | all workflow threads have been joined
[2025-07-26 05:29:45] 2025-07-26 09:29:24,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:29:45] 2025-07-26 09:29:24,248 | INFO     | traces error code: 0
[2025-07-26 05:29:45] 2025-07-26 09:29:24,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:29:45] 2025-07-26 09:29:45,089 | INFO     | PID=4036026 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:29:45] 2025-07-26 09:29:45,089 | INFO     | .. there are 15 such processes running
[2025-07-26 05:29:45] 2025-07-26 09:29:45,091 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:29:45] 2025-07-26 09:29:45,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:29:45] 2025-07-26 09:29:45,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:29:45] 2025-07-26 09:29:45,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:29:45] 2025-07-26 09:29:45,091 | INFO     | [monitor] control thread has ended
[2025-07-26 05:29:45] 2025-07-26 09:29:45,393 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:29:45] 2025-07-26 09:29:45,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:29:45] 2025-07-26 09:29:45,404 [wrapper] pilotpid: 4036026
[2025-07-26 05:29:45] 2025-07-26 09:29:45,407 [wrapper] Pilot exit status: 0
[2025-07-26 05:29:45] 2025-07-26 09:29:45,447 [wrapper] pandaids: 6745068674
[2025-07-26 05:29:45] 2025-07-26 09:29:45,644 [wrapper] cleanup supervisor_pilot  129489 4036027
[2025-07-26 05:29:45] 2025-07-26 09:29:45,652 [wrapper] Test setup, not cleaning
[2025-07-26 05:29:45] 2025-07-26 09:29:45,655 [wrapper] apfmon messages muted
[2025-07-26 05:29:45] 2025-07-26 09:29:45,667 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:29:45] 2025-07-26 09:29:45,680 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:29:46]  *** Error codes and diagnostics ***
[2025-07-26 05:29:46]     "exeErrorCode": 0,
[2025-07-26 05:29:46]     "exeErrorDiag": "",
[2025-07-26 05:29:46]     "pilotErrorCode": 0,
[2025-07-26 05:29:46]     "pilotErrorDiag": "",
[2025-07-26 05:29:46]  *** Listing of results directory ***
[2025-07-26 05:29:46] total 438092
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 20:55 pilot3.tar.gz
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 21:01 queuedata.json
[2025-07-26 05:29:46] -rwx------. 1 boincer umatlas     36292 Jul 25 21:02 runpilot2-wrapper.sh
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas       100 Jul 26 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:29:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 03:10 run_atlas
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas       105 Jul 26 03:10 job.xml
[2025-07-26 05:29:46] -rw-r--r--. 2 boincer umatlas 231128197 Jul 26 03:10 EVNT.45743347._001671.pool.root.1
[2025-07-26 05:29:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 03:10 start_atlas.sh
[2025-07-26 05:29:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 03:10 shared
[2025-07-26 05:29:46] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 03:10 input.tar.gz
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas         0 Jul 26 03:10 boinc_lockfile
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 03:10 pandaJob.out
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas    980001 Jul 26 03:11 agis_schedconf.cvmfs.json
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas   1593052 Jul 26 03:11 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:29:46] drwx------. 4 boincer umatlas      4096 Jul 26 03:11 pilot3
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas      6857 Jul 26 05:21 init_data.xml
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas 211364117 Jul 26 05:28 HITS.45743349._029885.pool.root.1
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas       530 Jul 26 05:28 boinc_task_state.xml
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas      1039 Jul 26 05:28 memory_monitor_summary.json
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas    353426 Jul 26 05:28 log.45743349._029885.job.log.tgz.1
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas      7829 Jul 26 05:29 heartbeat.json
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 05:29 boinc_mmap_file
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas        27 Jul 26 05:29 wrapper_checkpoint.txt
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas        95 Jul 26 05:29 pilot_heartbeat.json
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas       823 Jul 26 05:29 pilotlog.txt
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas    763258 Jul 26 05:29 log.45743349._029885.job.log.1
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas       357 Jul 26 05:29 output.list
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas       620 Jul 26 05:29 runtime_log
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas   1136640 Jul 26 05:29 result.tar.gz
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas      8670 Jul 26 05:29 runtime_log.err
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas       654 Jul 26 05:29 NFFLDm6Tiz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkrzKDm7fAUzm.diag
[2025-07-26 05:29:46] -rw-r--r--. 1 boincer umatlas     21303 Jul 26 05:29 stderr.txt
[2025-07-26 05:29:46] HITS file was successfully produced:
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas 211364117 Jul 26 05:28 shared/HITS.pool.root.1
[2025-07-26 05:29:46]  *** Contents of shared directory: ***
[2025-07-26 05:29:46] total 433792
[2025-07-26 05:29:46] -rw-r--r--. 2 boincer umatlas 231128197 Jul 26 03:10 ATLAS.root_0
[2025-07-26 05:29:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 03:10 start_atlas.sh
[2025-07-26 05:29:46] -rw-r--r--. 2 boincer umatlas    542900 Jul 26 03:10 input.tar.gz
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas 211364117 Jul 26 05:28 HITS.pool.root.1
[2025-07-26 05:29:46] -rw-------. 1 boincer umatlas   1136640 Jul 26 05:29 result.tar.gz
05:29:47 (4032092): run_atlas exited; CPU time 53422.986140
05:29:47 (4032092): called boinc_finish(0)

</stderr_txt>
]]>

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