Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:02:26 (277795): wrapper (7.7.26015): starting
20:02:26 (277795): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 20:02:26] Arguments: --nthreads 4
[2025-07-26 20:02:26] Threads: 4
[2025-07-26 20:02:26] Checking for CVMFS
[2025-07-26 20:02:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:02:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:02:26] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:02:27] 2.9.2.0 3116 835 77840 148784 3 57 19378664 36864001 0 130560 0 724735 99.993 28976 2883 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-26 20:02:27] CVMFS is ok
[2025-07-26 20:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 20:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 20:02:27] Further information can be found at the LHC@home message board.
[2025-07-26 20:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:02:27] Checking for apptainer binary...
[2025-07-26 20:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:02:27] Running /usr/bin/apptainer --version
[2025-07-26 20:02:27] apptainer version 1.4.1-1.1
[2025-07-26 20:02:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:02:27] thA338
[2025-07-26 20:02:27] apptainer works
[2025-07-26 20:02:27] Set ATHENA_PROC_NUMBER=4
[2025-07-26 20:02:27] Set ATHENA_CORE_NUMBER=4
[2025-07-26 20:02:27] Starting ATLAS job with PandaID=6745067720
[2025-07-26 20:02:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 21:23:28]  *** The last 200 lines of the pilot log: ***
[2025-07-26 21:23:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-07-26 21:23:28]  is_altstaged=None
[2025-07-26 21:23:28]  is_tar=False
[2025-07-26 21:23:28]  lfn=log.45743349._029698.job.log.tgz.1
[2025-07-26 21:23:28]  mtime=0
[2025-07-26 21:23:28]  protocol_id=None
[2025-07-26 21:23:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-26 21:23:28]  replicas=None
[2025-07-26 21:23:28]  scope=mc23_13p6TeV
[2025-07-26 21:23:28]  status=None
[2025-07-26 21:23:28]  status_code=0
[2025-07-26 21:23:28]  storage_token=
[2025-07-26 21:23:28]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6745067720/log.45743349._029698.job.log.tgz.1
[2025-07-26 21:23:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/ae/log.45743349._029698.job.log.tgz.1
[2025-07-26 21:23:28]  workdir=None
[2025-07-26 21:23:28] ]
[2025-07-26 21:23:28] 2025-07-26 19:22:49,364 | INFO     | transferring file log.45743349._029698.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6745067720/log.45743349._029698.job.log.tgz.1 to /local/data/boinc/
[2025-07-26 21:23:28] 2025-07-26 19:22:49,364 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6745067720/log.45743349._029698.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0296
[2025-07-26 21:23:28] 2025-07-26 19:22:49,383 | INFO     | adding to output.list: log.45743349._029698.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/ae/log.45743349._029698.job.log.tg
[2025-07-26 21:23:28] 2025-07-26 19:22:49,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 21:23:28] 2025-07-26 19:22:49,384 | INFO     | summary of transferred files:
[2025-07-26 21:23:28] 2025-07-26 19:22:49,384 | INFO     |  -- lfn=log.45743349._029698.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 21:23:28] 2025-07-26 19:22:49,384 | INFO     | stage-out finished correctly
[2025-07-26 21:23:28] 2025-07-26 19:22:50,907 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 21:23:28] 2025-07-26 19:22:51,843 | INFO     | monitor loop #372: job 0:6745067720 is in state 'finished'
[2025-07-26 21:23:28] 2025-07-26 19:22:51,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:23:28] 2025-07-26 19:22:51,854 | INFO     | job 6745067720 has state=finished
[2025-07-26 21:23:28] 2025-07-26 19:22:51,855 | INFO     | preparing for final server update for job 6745067720 in state='finished'
[2025-07-26 21:23:28] 2025-07-26 19:22:51,855 | INFO     | this job has now completed (state=finished)
[2025-07-26 21:23:28] 2025-07-26 19:22:51,855 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 21:23:28] 2025-07-26 19:22:51,855 | INFO     | log transfer has been attempted: DONE
[2025-07-26 21:23:28] 2025-07-26 19:22:51,855 | INFO     | job 6745067720 has finished - writing final server update
[2025-07-26 21:23:28] 2025-07-26 19:22:51,856 | INFO     | total number of processed events: 400 (read)
[2025-07-26 21:23:28] 2025-07-26 19:22:51,856 | INFO     | executing command: lscpu
[2025-07-26 21:23:28] 2025-07-26 19:22:51,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 21:23:28] 2025-07-26 19:22:54,345 | INFO     | monitor loop #373: job 0:6745067720 is in state 'finished'
[2025-07-26 21:23:28] 2025-07-26 19:22:54,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,159 | INFO     | PID=281494 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 21:23:28] 2025-07-26 19:22:56,638 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 21:23:28] 2025-07-26 19:22:56,639 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3308.5134375000002
[2025-07-26 21:23:28] 2025-07-26 19:22:56,641 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6745067720/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,641 | INFO     | extracted standard info from prmon json
[2025-07-26 21:23:28] 2025-07-26 19:22:56,641 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 21:23:28] 2025-07-26 19:22:56,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 21:23:28] 2025-07-26 19:22:56,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 21:23:28] 2025-07-26 19:22:56,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 21:23:28] 2025-07-26 19:22:56,642 | INFO     | fitting pss+swap vs Time
[2025-07-26 21:23:28] 2025-07-26 19:22:56,642 | INFO     | sum of square deviations: 115715658.0
[2025-07-26 21:23:28] 2025-07-26 19:22:56,642 | INFO     | sum of deviations: 157951539.50000003
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | mean x: 1753555449.5
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | mean y: 2420346.4305555555
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | -- intersect: -2391177785.700703
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | intersect: -2391177785.700703
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | chi2: 0.01385106855171354
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | -- intersect: -2391177785.700703
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | current memory leak: 1.36 B/s (using 72 data points, chi2=0.01)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | could have reported an average CPU frequency of 3649 MHz (6 samples)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | ..............................
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . Timing measurements:
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . get job = 0 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . initial setup = 1 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . payload setup = 5 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . stage-in = 0 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . payload execution = 4789 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . stage-out = 0 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | . log creation = 0 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,643 | INFO     | ..............................
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | 
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | job summary report
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | --------------------------------------------------
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | PanDA job id: 6745067720
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | task id: 45743349
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | errors: (none)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | pilot state: finished 
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | transexitcode: 0
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | exeerrorcode: 0
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | exeerrordiag: 
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | exitcode: 0
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | exitmsg: OK
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | cpuconsumptiontime: 18216 s
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | nevents: 400
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | neventsw: 0
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | pid: 288125
[2025-07-26 21:23:28] 2025-07-26 19:22:56,684 | INFO     | pgrp: 288125
[2025-07-26 21:23:28] 2025-07-26 19:22:56,685 | INFO     | corecount: 4
[2025-07-26 21:23:28] 2025-07-26 19:22:56,685 | INFO     | event service: False
[2025-07-26 21:23:28] 2025-07-26 19:22:56,685 | INFO     | sizes: {0: 2397472, 4: 2397734, 11: 2397762, 4798: 2424116, 4799: 2424115, 4800: 2433175, 4802: 2433359, 4808: 2433553}
[2025-07-26 21:23:28] 2025-07-26 19:22:56,685 | INFO     | --------------------------------------------------
[2025-07-26 21:23:28] 2025-07-26 19:22:56,685 | INFO     | 
[2025-07-26 21:23:28] 2025-07-26 19:22:56,685 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,703 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | job 6745067720 has completed (purged errors)
[2025-07-26 21:23:28] 2025-07-26 19:22:56,704 | INFO     | overall cleanup function is called
[2025-07-26 21:23:28] 2025-07-26 19:22:57,711 | INFO     | --- collectZombieJob: --- 10, [288125]
[2025-07-26 21:23:28] 2025-07-26 19:22:57,711 | INFO     | zombie collector waiting for pid 288125
[2025-07-26 21:23:28] 2025-07-26 19:22:57,711 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 21:23:28] 2025-07-26 19:22:57,711 | INFO     | collected zombie processes
[2025-07-26 21:23:28] 2025-07-26 19:22:57,711 | INFO     | will attempt to kill all subprocesses of pid=288125
[2025-07-26 21:23:28] 2025-07-26 19:22:57,755 | INFO     | process IDs to be killed: [288125] (in reverse order)
[2025-07-26 21:23:28] 2025-07-26 19:22:57,788 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 21:23:28] 2025-07-26 19:22:57,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 21:23:28] 2025-07-26 19:22:57,790 | INFO     | did not find any defunct processes belonging to 288125
[2025-07-26 21:23:28] 2025-07-26 19:22:57,791 | INFO     | did not find any defunct processes belonging to 288125
[2025-07-26 21:23:28] 2025-07-26 19:22:57,791 | INFO     | ready for new job
[2025-07-26 21:23:28] 2025-07-26 19:22:57,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 21:23:28] 2025-07-26 19:22:57,792 | INFO     | ***************************************
[2025-07-26 21:23:28] 2025-07-26 19:22:57,792 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 21:23:28] 2025-07-26 19:22:57,792 | INFO     | ***************************************
[2025-07-26 21:23:28] 2025-07-26 19:22:57,792 | INFO     | 
[2025-07-26 21:23:28] 2025-07-26 19:22:57,792 | INFO     | architecture information:
[2025-07-26 21:23:28] 2025-07-26 19:22:57,792 | INFO     | executing command: cat /etc/os-release
[2025-07-26 21:23:28] 2025-07-26 19:22:57,807 | INFO     | cat /etc/os-release:
[2025-07-26 21:23:28] NAME="CentOS Linux"
[2025-07-26 21:23:28] VERSION="7 (Core)"
[2025-07-26 21:23:28] ID="centos"
[2025-07-26 21:23:28] ID_LIKE="rhel fedora"
[2025-07-26 21:23:28] VERSION_ID="7"
[2025-07-26 21:23:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 21:23:28] ANSI_COLOR="0;31"
[2025-07-26 21:23:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 21:23:28] HOME_URL="https://www.centos.org/"
[2025-07-26 21:23:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 21:23:28] 
[2025-07-26 21:23:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 21:23:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 21:23:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 21:23:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 21:23:28] 
[2025-07-26 21:23:28] 2025-07-26 19:22:57,807 | INFO     | ***************************************
[2025-07-26 21:23:28] 2025-07-26 19:22:58,310 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-26 21:23:28] 2025-07-26 19:22:58,328 | INFO     | sufficient remaining disk space (236027117568 B)
[2025-07-26 21:23:28] 2025-07-26 19:22:58,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 21:23:28] 2025-07-26 19:22:58,328 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 21:23:28] 2025-07-26 19:22:58,328 | INFO     | update_server=False
[2025-07-26 21:23:28] 2025-07-26 19:22:58,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 21:23:28] 2025-07-26 19:22:58,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 21:23:28] 2025-07-26 19:22:58,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:23:28] 2025-07-26 19:22:58,329 | INFO     | aborting loop
[2025-07-26 21:23:28] 2025-07-26 19:22:58,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 21:23:28] 2025-07-26 19:22:59,041 | INFO     | all payload control threads have been joined
[2025-07-26 21:23:28] 2025-07-26 19:22:59,041 | INFO     | all data control threads have been joined
[2025-07-26 21:23:28] 2025-07-26 19:22:59,334 | INFO     | [job] retrieve thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:22:59,334 | INFO     | [job] job monitor thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:22:59,335 | INFO     | [job] queue monitor thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:22:59,744 | INFO     | [payload] failed_post thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:22:59,809 | INFO     | all job control threads have been joined
[2025-07-26 21:23:28] 2025-07-26 19:22:59,829 | INFO     | [job] validate thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:22:59,972 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,046 | INFO     | [payload] control thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,047 | INFO     | [data] control thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,055 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,278 | INFO     | [payload] validate_post thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,335 | INFO     | [data] copytool_out thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,467 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,476 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,587 | INFO     | [data] copytool_in thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:00,814 | INFO     | [job] control thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:01,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 21:23:28] 2025-07-26 19:23:05,468 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 21:23:28] 2025-07-26 19:23:06,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075650205504)>', '<ExcThread(monitor, started 140074545030912)>']
[2025-07-26 21:23:28] 2025-07-26 19:23:11,194 | INFO     | all workflow threads have been joined
[2025-07-26 21:23:28] 2025-07-26 19:23:11,194 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 21:23:28] 2025-07-26 19:23:11,194 | INFO     | traces error code: 0
[2025-07-26 21:23:28] 2025-07-26 19:23:11,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 21:23:28] 2025-07-26 19:23:28,284 | INFO     | PID=281494 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 21:23:28] 2025-07-26 19:23:28,285 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 21:23:28] 2025-07-26 19:23:28,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 21:23:28] 2025-07-26 19:23:28,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 21:23:28] 2025-07-26 19:23:28,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 21:23:28] 2025-07-26 19:23:28,285 | INFO     | [monitor] control thread has ended
[2025-07-26 21:23:28] 2025-07-26 19:23:28,361 [wrapper] ==== pilot stdout END ====
[2025-07-26 21:23:28] 2025-07-26 19:23:28,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 21:23:28] 2025-07-26 19:23:28,369 [wrapper] pilotpid: 281494
[2025-07-26 21:23:28] 2025-07-26 19:23:28,373 [wrapper] Pilot exit status: 0
[2025-07-26 21:23:28] 2025-07-26 19:23:28,386 [wrapper] pandaids: 6745067720
[2025-07-26 21:23:28] 2025-07-26 19:23:28,409 [wrapper] cleanup supervisor_pilot  300276 281495
[2025-07-26 21:23:28] 2025-07-26 19:23:28,412 [wrapper] Test setup, not cleaning
[2025-07-26 21:23:28] 2025-07-26 19:23:28,417 [wrapper] apfmon messages muted
[2025-07-26 21:23:28] 2025-07-26 19:23:28,421 [wrapper] ==== wrapper stdout END ====
[2025-07-26 21:23:28] 2025-07-26 19:23:28,425 [wrapper] ==== wrapper stderr END ====
[2025-07-26 21:23:28]  *** Error codes and diagnostics ***
[2025-07-26 21:23:28]     "exeErrorCode": 0,
[2025-07-26 21:23:28]     "exeErrorDiag": "",
[2025-07-26 21:23:28]     "pilotErrorCode": 0,
[2025-07-26 21:23:28]     "pilotErrorDiag": "",
[2025-07-26 21:23:28]  *** Listing of results directory ***
[2025-07-26 21:23:28] total 433024
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc    530466 Jul 26 02:19 pilot3.tar.gz
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc      5112 Jul 26 02:40 queuedata.json
[2025-07-26 21:23:28] -rwx------ 1 boinc boinc     36292 Jul 26 02:42 runpilot2-wrapper.sh
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc       100 Jul 26 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 21:23:28] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 20:02 run_atlas
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc       105 Jul 26 20:02 job.xml
[2025-07-26 21:23:28] -rw-r--r-- 2 boinc boinc 228881282 Jul 26 20:02 EVNT.45743347._001663.pool.root.1
[2025-07-26 21:23:28] -rw-r--r-- 2 boinc boinc    542887 Jul 26 20:02 input.tar.gz
[2025-07-26 21:23:28] -rw-r--r-- 2 boinc boinc     15095 Jul 26 20:02 start_atlas.sh
[2025-07-26 21:23:28] drwxrwx--x 2 boinc boinc      4096 Jul 26 20:02 shared
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc         0 Jul 26 20:02 boinc_setup_complete
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc      6379 Jul 26 20:02 init_data.xml
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc         0 Jul 26 20:02 boinc_lockfile
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc      2560 Jul 26 20:02 pandaJob.out
[2025-07-26 21:23:28] -rw------- 1 boinc boinc    980125 Jul 26 20:02 agis_schedconf.cvmfs.json
[2025-07-26 21:23:28] -rw------- 1 boinc boinc   1593052 Jul 26 20:02 agis_ddmendpoints.agis.ALL.json
[2025-07-26 21:23:28] drwx------ 4 boinc boinc      4096 Jul 26 20:02 pilot3
[2025-07-26 21:23:28] -rw------- 1 boinc boinc 209262513 Jul 26 21:22 HITS.45743349._029698.pool.root.1
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc       530 Jul 26 21:22 boinc_task_state.xml
[2025-07-26 21:23:28] -rw------- 1 boinc boinc      1020 Jul 26 21:22 memory_monitor_summary.json
[2025-07-26 21:23:28] -rw------- 1 boinc boinc    227249 Jul 26 21:22 log.45743349._029698.job.log.tgz.1
[2025-07-26 21:23:28] -rw------- 1 boinc boinc      7754 Jul 26 21:22 heartbeat.json
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc        27 Jul 26 21:23 wrapper_checkpoint.txt
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc      8192 Jul 26 21:23 boinc_mmap_file
[2025-07-26 21:23:28] -rw------- 1 boinc boinc       746 Jul 26 21:23 pilotlog.txt
[2025-07-26 21:23:28] -rw------- 1 boinc boinc        95 Jul 26 21:23 pilot_heartbeat.json
[2025-07-26 21:23:28] -rw------- 1 boinc boinc    470059 Jul 26 21:23 log.45743349._029698.job.log.1
[2025-07-26 21:23:28] -rw------- 1 boinc boinc       357 Jul 26 21:23 output.list
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc       620 Jul 26 21:23 runtime_log
[2025-07-26 21:23:28] -rw------- 1 boinc boinc    716800 Jul 26 21:23 result.tar.gz
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc      8734 Jul 26 21:23 runtime_log.err
[2025-07-26 21:23:28] -rw------- 1 boinc boinc       658 Jul 26 21:23 JgTKDm4Aiz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqtQLDmTxeGEm.diag
[2025-07-26 21:23:28] -rw-r--r-- 1 boinc boinc     21562 Jul 26 21:23 stderr.txt
[2025-07-26 21:23:28] HITS file was successfully produced:
[2025-07-26 21:23:28] -rw------- 1 boinc boinc 209262513 Jul 26 21:22 shared/HITS.pool.root.1
[2025-07-26 21:23:28]  *** Contents of shared directory: ***
[2025-07-26 21:23:28] total 429136
[2025-07-26 21:23:28] -rw-r--r-- 2 boinc boinc 228881282 Jul 26 20:02 ATLAS.root_0
[2025-07-26 21:23:28] -rw-r--r-- 2 boinc boinc    542887 Jul 26 20:02 input.tar.gz
[2025-07-26 21:23:28] -rw-r--r-- 2 boinc boinc     15095 Jul 26 20:02 start_atlas.sh
[2025-07-26 21:23:28] -rw------- 1 boinc boinc 209262513 Jul 26 21:22 HITS.pool.root.1
[2025-07-26 21:23:28] -rw------- 1 boinc boinc    716800 Jul 26 21:23 result.tar.gz
21:23:29 (277795): run_atlas exited; CPU time 18231.041693
21:23:29 (277795): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN