Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:09:35 (1981933): wrapper (7.7.26015): starting
17:09:35 (1981933): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 17:09:35] Arguments: --nthreads 12
[2025-07-26 17:09:35] Threads: 12
[2025-07-26 17:09:35] Checking for CVMFS
[2025-07-26 17:09:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 17:09:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 17:09:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 17:09:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 17:09:37] 2.13.1.0 3863 2903 170112 148780 1 236 28939108 46080000 39002 130560 0 18623136 99.928 4304217 20524 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-26 17:09:37] CVMFS is ok
[2025-07-26 17:09:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 17:09:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 17:09:37] Further information can be found at the LHC@home message board.
[2025-07-26 17:09:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 17:09:37] Checking for apptainer binary...
[2025-07-26 17:09:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 17:09:37] Running /usr/bin/apptainer --version
[2025-07-26 17:09:37] apptainer version 1.4.1-1.el9
[2025-07-26 17:09:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 17:09:38] mff2103.farm.particle.cz
[2025-07-26 17:09:38] apptainer works
[2025-07-26 17:09:38] Set ATHENA_PROC_NUMBER=12
[2025-07-26 17:09:38] Set ATHENA_CORE_NUMBER=12
[2025-07-26 17:09:39] Starting ATLAS job with PandaID=6745067519
[2025-07-26 17:09:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 19:46:24]  *** The last 200 lines of the pilot log: ***
[2025-07-26 19:46:24] 2025-07-26 17:26:55,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:46:24] 2025-07-26 17:26:55,845 | INFO     | 8156s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-07-26 19:46:24] 2025-07-26 17:26:58,261 | INFO     | monitor loop #550: job 0:6745067519 is in state 'finished'
[2025-07-26 19:46:24] 2025-07-26 17:26:58,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,338 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-26 19:46:24] 2025-07-26 17:26:58,366 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2791.2984583333327
[2025-07-26 19:46:24] 2025-07-26 17:26:58,398 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6745067519/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,399 | INFO     | extracted standard info from prmon json
[2025-07-26 19:46:24] 2025-07-26 17:26:58,399 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 19:46:24] 2025-07-26 17:26:58,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 19:46:24] 2025-07-26 17:26:58,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 19:46:24] 2025-07-26 17:26:58,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 19:46:24] 2025-07-26 17:26:58,402 | INFO     | fitting pss+swap vs Time
[2025-07-26 19:46:24] 2025-07-26 17:26:58,403 | INFO     | sum of square deviations: 681212601.2000011
[2025-07-26 19:46:24] 2025-07-26 17:26:58,403 | INFO     | sum of deviations: 32467299110.80001
[2025-07-26 19:46:24] 2025-07-26 17:26:58,404 | INFO     | mean x: 1753546825.6
[2025-07-26 19:46:24] 2025-07-26 17:26:58,404 | INFO     | mean y: 2605869.7846153844
[2025-07-26 19:46:24] 2025-07-26 17:26:58,404 | INFO     | -- intersect: -83573254575.62982
[2025-07-26 19:46:24] 2025-07-26 17:26:58,404 | INFO     | intersect: -83573254575.62982
[2025-07-26 19:46:24] 2025-07-26 17:26:58,404 | INFO     | chi2: 4.560637159010074
[2025-07-26 19:46:24] 2025-07-26 17:26:58,404 | INFO     | sum of square deviations: 605596543.6480012
[2025-07-26 19:46:24] 2025-07-26 17:26:58,409 | INFO     | sum of deviations: 39831102038.672005
[2025-07-26 19:46:24] 2025-07-26 17:26:58,409 | INFO     | mean x: 1753546673.104
[2025-07-26 19:46:24] 2025-07-26 17:26:58,409 | INFO     | mean y: 2620168.256
[2025-07-26 19:46:24] 2025-07-26 17:26:58,409 | INFO     | -- intersect: -115331090366.55278
[2025-07-26 19:46:24] 2025-07-26 17:26:58,409 | INFO     | intersect: -115331090366.55278
[2025-07-26 19:46:24] 2025-07-26 17:26:58,410 | INFO     | chi2: 3.909878462709522
[2025-07-26 19:46:24] 2025-07-26 17:26:58,410 | INFO     | current chi2=3.909878462709522 (change=14.269030260714818 %)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,410 | INFO     | right removable region: 124
[2025-07-26 19:46:24] 2025-07-26 17:26:58,410 | INFO     | sum of square deviations: 605588613.6480012
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | sum of deviations: -8197320731.1119995
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | mean x: 1753546978.104
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | mean y: 2687380.624
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | -- intersect: 23738911399.105698
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | intersect: 23738911399.105698
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | chi2: 0.8453797978243025
[2025-07-26 19:46:24] 2025-07-26 17:26:58,411 | INFO     | current chi2=0.8453797978243025 (change=81.46355940300676 %)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,412 | INFO     | sum of square deviations: 535778688.59166616
[2025-07-26 19:46:24] 2025-07-26 17:26:58,412 | INFO     | sum of deviations: -13110220760.925
[2025-07-26 19:46:24] 2025-07-26 17:26:58,412 | INFO     | mean x: 1753547130.6083333
[2025-07-26 19:46:24] 2025-07-26 17:26:58,412 | INFO     | mean y: 2697859.725
[2025-07-26 19:46:24] 2025-07-26 17:26:58,413 | INFO     | -- intersect: 42911067465.44997
[2025-07-26 19:46:24] 2025-07-26 17:26:58,413 | INFO     | intersect: 42911067465.44997
[2025-07-26 19:46:24] 2025-07-26 17:26:58,413 | INFO     | chi2: 0.7279770412825359
[2025-07-26 19:46:24] 2025-07-26 17:26:58,413 | INFO     | current chi2=0.7279770412825359 (change=13.887575364814515 %)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,413 | INFO     | left removable region: 20
[2025-07-26 19:46:24] 2025-07-26 17:26:58,413 | INFO     | sum of square deviations: 348758056.375
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | sum of deviations: -4176075224.875
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | mean x: 1753547252.625
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | mean y: 2716444.875
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | -- intersect: 20999923831.135155
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | intersect: 20999923831.135155
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | chi2: 0.0032161412038523886
[2025-07-26 19:46:24] 2025-07-26 17:26:58,414 | INFO     | -- intersect: 20999923831.135155
[2025-07-26 19:46:24] 2025-07-26 17:26:58,415 | INFO     | current memory leak: -11.97 B/s (using 104 data points, chi2=0.00)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,415 | INFO     | could have reported an average CPU frequency of 2805 MHz (8 samples)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,415 | INFO     | ..............................
[2025-07-26 19:46:24] 2025-07-26 17:26:58,415 | INFO     | . Timing measurements:
[2025-07-26 19:46:24] 2025-07-26 17:26:58,415 | INFO     | . get job = 0 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,415 | INFO     | . initial setup = 4 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,416 | INFO     | . payload setup = 80 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,416 | INFO     | . stage-in = 0 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,416 | INFO     | . payload execution = 7919 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,416 | INFO     | . stage-out = 1 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,416 | INFO     | . log creation = 0 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,416 | INFO     | ..............................
[2025-07-26 19:46:24] 2025-07-26 17:26:58,526 | INFO     | 
[2025-07-26 19:46:24] 2025-07-26 17:26:58,526 | INFO     | job summary report
[2025-07-26 19:46:24] 2025-07-26 17:26:58,526 | INFO     | --------------------------------------------------
[2025-07-26 19:46:24] 2025-07-26 17:26:58,526 | INFO     | PanDA job id: 6745067519
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | task id: 45743349
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | errors: (none)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | pilot state: finished 
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | transexitcode: 0
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | exeerrorcode: 0
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | exeerrordiag: 
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | exitcode: 0
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | exitmsg: OK
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | cpuconsumptiontime: 44939 s
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | nevents: 400
[2025-07-26 19:46:24] 2025-07-26 17:26:58,527 | INFO     | neventsw: 0
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | pid: 2099183
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | pgrp: 2099183
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | corecount: 12
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | event service: False
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | sizes: {0: 2397305, 1: 2397504, 12: 2397504, 23: 2397532, 33: 2397560, 44: 2397616, 48: 2398034, 55: 2398062, 8004: 2425751, 8007: 2434807, 8055: 2434945}
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | --------------------------------------------------
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | 
[2025-07-26 19:46:24] 2025-07-26 17:26:58,533 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-07-26 19:46:24] 2025-07-26 17:26:58,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,795 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | job 6745067519 has completed (purged errors)
[2025-07-26 19:46:24] 2025-07-26 17:26:58,796 | INFO     | overall cleanup function is called
[2025-07-26 19:46:24] 2025-07-26 17:26:59,808 | INFO     | --- collectZombieJob: --- 10, [2099183]
[2025-07-26 19:46:24] 2025-07-26 17:26:59,808 | INFO     | zombie collector waiting for pid 2099183
[2025-07-26 19:46:24] 2025-07-26 17:26:59,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 19:46:24] 2025-07-26 17:26:59,808 | INFO     | collected zombie processes
[2025-07-26 19:46:24] 2025-07-26 17:26:59,808 | INFO     | will attempt to kill all subprocesses of pid=2099183
[2025-07-26 19:46:24] 2025-07-26 17:27:00,833 | INFO     | process IDs to be killed: [2099183] (in reverse order)
[2025-07-26 19:46:24] 2025-07-26 17:27:01,468 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 19:46:24] 2025-07-26 17:27:01,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 19:46:24] 2025-07-26 17:27:01,510 | INFO     | did not find any defunct processes belonging to 2099183
[2025-07-26 19:46:24] 2025-07-26 17:27:01,561 | INFO     | did not find any defunct processes belonging to 2099183
[2025-07-26 19:46:24] 2025-07-26 17:27:01,561 | INFO     | ready for new job
[2025-07-26 19:46:24] 2025-07-26 17:27:01,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 19:46:24] 2025-07-26 17:27:01,563 | INFO     | ***************************************
[2025-07-26 19:46:24] 2025-07-26 17:27:01,563 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 19:46:24] 2025-07-26 17:27:01,563 | INFO     | ***************************************
[2025-07-26 19:46:24] 2025-07-26 17:27:01,564 | INFO     | 
[2025-07-26 19:46:24] 2025-07-26 17:27:01,574 | INFO     | architecture information:
[2025-07-26 19:46:24] 2025-07-26 17:27:01,586 | INFO     | executing command: cat /etc/os-release
[2025-07-26 19:46:24] 2025-07-26 17:27:01,752 | INFO     | cat /etc/os-release:
[2025-07-26 19:46:24] NAME="CentOS Linux"
[2025-07-26 19:46:24] VERSION="7 (Core)"
[2025-07-26 19:46:24] ID="centos"
[2025-07-26 19:46:24] ID_LIKE="rhel fedora"
[2025-07-26 19:46:24] VERSION_ID="7"
[2025-07-26 19:46:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 19:46:24] ANSI_COLOR="0;31"
[2025-07-26 19:46:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 19:46:24] HOME_URL="https://www.centos.org/"
[2025-07-26 19:46:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 19:46:24] 
[2025-07-26 19:46:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 19:46:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 19:46:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 19:46:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 19:46:24] 
[2025-07-26 19:46:24] 2025-07-26 17:27:01,752 | INFO     | ***************************************
[2025-07-26 19:46:24] 2025-07-26 17:27:02,256 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-07-26 19:46:24] 2025-07-26 17:27:02,387 | INFO     | sufficient remaining disk space (1664426704896 B)
[2025-07-26 19:46:24] 2025-07-26 17:27:02,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 19:46:24] 2025-07-26 17:27:02,388 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 19:46:24] 2025-07-26 17:27:02,388 | INFO     | update_server=False
[2025-07-26 19:46:24] 2025-07-26 17:27:02,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 19:46:24] 2025-07-26 17:27:02,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:46:24] 2025-07-26 17:27:02,389 | INFO     | aborting loop
[2025-07-26 19:46:24] 2025-07-26 17:27:02,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 19:46:24] 2025-07-26 17:27:02,432 | INFO     | all job control threads have been joined
[2025-07-26 19:46:24] 2025-07-26 17:27:02,453 | INFO     | all payload control threads have been joined
[2025-07-26 19:46:24] 2025-07-26 17:27:02,759 | INFO     | all data control threads have been joined
[2025-07-26 19:46:24] 2025-07-26 17:27:03,395 | INFO     | [job] job monitor thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,397 | INFO     | [job] retrieve thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,438 | INFO     | [job] control thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,459 | INFO     | [payload] control thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 19:46:24] 2025-07-26 17:27:03,595 | INFO     | [payload] failed_post thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 19:46:24] 2025-07-26 17:27:03,651 | INFO     | [payload] validate_post thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,765 | INFO     | [data] control thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:03,988 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:04,205 | INFO     | [data] copytool_in thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:04,316 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:04,547 | INFO     | [job] queue monitor thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:04,618 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:04,623 | INFO     | [job] validate thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:04,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:05,606 | INFO     | [data] copytool_out thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:06,402 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 19:46:24] 2025-07-26 17:27:06,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543736383296)>', '<ExcThread(monitor, started 140543241729792)>']
[2025-07-26 19:46:24] 2025-07-26 17:27:11,808 | INFO     | all workflow threads have been joined
[2025-07-26 19:46:24] 2025-07-26 17:27:11,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 19:46:24] 2025-07-26 17:27:11,808 | INFO     | traces error code: 0
[2025-07-26 19:46:24] 2025-07-26 17:27:11,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 19:46:24] 2025-07-26 17:27:32,102 | INFO     | PID=2005916 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 19:46:24] 2025-07-26 17:27:32,102 | INFO     | .. there are 100 such processes running
[2025-07-26 19:46:24] 2025-07-26 17:27:32,103 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 19:46:24] 2025-07-26 17:27:32,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 19:46:24] 2025-07-26 17:27:32,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 19:46:24] 2025-07-26 17:27:32,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 19:46:24] 2025-07-26 17:27:32,103 | INFO     | [monitor] control thread has ended
[2025-07-26 19:46:24] 2025-07-26 17:27:32,552 [wrapper] ==== pilot stdout END ====
[2025-07-26 19:46:24] 2025-07-26 17:27:32,585 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 19:46:24] 2025-07-26 17:27:32,615 [wrapper] pilotpid: 2005916
[2025-07-26 19:46:24] 2025-07-26 17:27:32,646 [wrapper] Pilot exit status: 0
[2025-07-26 19:46:24] 2025-07-26 17:27:32,824 [wrapper] pandaids: 6745067519
[2025-07-26 19:46:24] 2025-07-26 17:27:33,371 [wrapper] cleanup supervisor_pilot 2594470 2005917
[2025-07-26 19:46:24] 2025-07-26 17:27:33,408 [wrapper] Test setup, not cleaning
[2025-07-26 19:46:24] 2025-07-26 17:27:33,457 [wrapper] apfmon messages muted
[2025-07-26 19:46:24] 2025-07-26 17:27:33,504 [wrapper] ==== wrapper stdout END ====
[2025-07-26 19:46:24] 2025-07-26 17:27:33,529 [wrapper] ==== wrapper stderr END ====
[2025-07-26 19:46:24]  *** Error codes and diagnostics ***
[2025-07-26 19:46:24]     "exeErrorCode": 0,
[2025-07-26 19:46:24]     "exeErrorDiag": "",
[2025-07-26 19:46:24]     "pilotErrorCode": 0,
[2025-07-26 19:46:24]     "pilotErrorDiag": "",
[2025-07-26 19:46:24]  *** Listing of results directory ***
[2025-07-26 19:46:24] total 437004
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc    530466 Jul 26 02:19 pilot3.tar.gz
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc      5112 Jul 26 02:24 queuedata.json
[2025-07-26 19:46:24] -rwx------ 1 boinc boinc     36292 Jul 26 02:24 runpilot2-wrapper.sh
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc       100 Jul 26 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 19:46:24] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 17:09 run_atlas
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc       105 Jul 26 17:09 job.xml
[2025-07-26 19:46:24] -rw-r--r-- 2 boinc boinc 230757271 Jul 26 17:09 EVNT.45743347._001654.pool.root.1
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc      6664 Jul 26 17:09 init_data.xml
[2025-07-26 19:46:24] -rw-r--r-- 2 boinc boinc     15095 Jul 26 17:09 start_atlas.sh
[2025-07-26 19:46:24] drwxrwx--x 2 boinc boinc      4096 Jul 26 17:09 shared
[2025-07-26 19:46:24] -rw-r--r-- 2 boinc boinc    542902 Jul 26 17:09 input.tar.gz
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc         0 Jul 26 17:09 boinc_lockfile
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc      2563 Jul 26 17:09 pandaJob.out
[2025-07-26 19:46:24] -rw------- 1 boinc boinc    980133 Jul 26 17:11 agis_schedconf.cvmfs.json
[2025-07-26 19:46:24] -rw------- 1 boinc boinc   1593052 Jul 26 17:11 agis_ddmendpoints.agis.ALL.json
[2025-07-26 19:46:24] drwx------ 4 boinc boinc      4096 Jul 26 17:11 pilot3
[2025-07-26 19:46:24] -rw------- 1 boinc boinc 210653402 Jul 26 19:25 HITS.45743349._029497.pool.root.1
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc       529 Jul 26 19:25 boinc_task_state.xml
[2025-07-26 19:46:24] -rw------- 1 boinc boinc      1018 Jul 26 19:26 memory_monitor_summary.json
[2025-07-26 19:46:24] -rw------- 1 boinc boinc    408760 Jul 26 19:26 log.45743349._029497.job.log.tgz.1
[2025-07-26 19:46:24] -rw------- 1 boinc boinc      7777 Jul 26 19:26 heartbeat.json
[2025-07-26 19:46:24] -rw------- 1 boinc boinc       824 Jul 26 19:27 pilotlog.txt
[2025-07-26 19:46:24] -rw------- 1 boinc boinc        95 Jul 26 19:27 pilot_heartbeat.json
[2025-07-26 19:46:24] -rw------- 1 boinc boinc    692256 Jul 26 19:27 log.45743349._029497.job.log.1
[2025-07-26 19:46:24] -rw------- 1 boinc boinc       357 Jul 26 19:27 output.list
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc       620 Jul 26 19:27 runtime_log
[2025-07-26 19:46:24] -rw------- 1 boinc boinc   1116160 Jul 26 19:27 result.tar.gz
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc      8721 Jul 26 19:27 runtime_log.err
[2025-07-26 19:46:24] -rw------- 1 boinc boinc       664 Jul 26 19:27 aIsKDmOthz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvpQLDmpmuW4m.diag
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc        26 Jul 26 19:46 wrapper_checkpoint.txt
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc      8192 Jul 26 19:46 boinc_mmap_file
[2025-07-26 19:46:24] -rw-r--r-- 1 boinc boinc     21274 Jul 26 19:46 stderr.txt
[2025-07-26 19:46:24] HITS file was successfully produced:
[2025-07-26 19:46:24] -rw------- 1 boinc boinc 210653402 Jul 26 19:25 shared/HITS.pool.root.1
[2025-07-26 19:46:24]  *** Contents of shared directory: ***
[2025-07-26 19:46:24] total 432720
[2025-07-26 19:46:24] -rw-r--r-- 2 boinc boinc 230757271 Jul 26 17:09 ATLAS.root_0
[2025-07-26 19:46:24] -rw-r--r-- 2 boinc boinc     15095 Jul 26 17:09 start_atlas.sh
[2025-07-26 19:46:24] -rw-r--r-- 2 boinc boinc    542902 Jul 26 17:09 input.tar.gz
[2025-07-26 19:46:24] -rw------- 1 boinc boinc 210653402 Jul 26 19:25 HITS.pool.root.1
[2025-07-26 19:46:24] -rw------- 1 boinc boinc   1116160 Jul 26 19:27 result.tar.gz
19:46:26 (1981933): run_atlas exited; CPU time 45467.328508
19:46:26 (1981933): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN