Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:15:18 (2495803): wrapper (7.7.26015): starting
02:15:18 (2495803): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 02:15:18] Arguments: --nthreads 8
[2025-07-26 02:15:18] Threads: 8
[2025-07-26 02:15:18] Checking for CVMFS
[2025-07-26 02:15:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 02:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 02:15:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 02:15:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 02:15:21] 2.12.6.0 3836034 25508 478504 148767 3 14 22378665 40960001 40798 16776704 0 138074536 99.699 102594082 20498 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 02:15:21] CVMFS is ok
[2025-07-26 02:15:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 02:15:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 02:15:21] Further information can be found at the LHC@home message board.
[2025-07-26 02:15:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 02:15:21] Checking for apptainer binary...
[2025-07-26 02:15:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 02:15:21] Running /usr/bin/apptainer --version
[2025-07-26 02:15:21] apptainer version 1.4.1-1.el9
[2025-07-26 02:15:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 02:15:22] lc-12-9.aglt2.org
[2025-07-26 02:15:22] apptainer works
[2025-07-26 02:15:22] Set ATHENA_PROC_NUMBER=8
[2025-07-26 02:15:22] Set ATHENA_CORE_NUMBER=8
[2025-07-26 02:15:22] Starting ATLAS job with PandaID=6745066515
[2025-07-26 02:15:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 05:51:20]  *** The last 200 lines of the pilot log: ***
[2025-07-26 05:51:20] 2025-07-26 09:50:43,145 | INFO     | monitor loop #742: job 0:6745066515 is in state 'finished'
[2025-07-26 05:51:20] 2025-07-26 09:50:43,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,094 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 05:51:20] 2025-07-26 09:50:45,136 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2581.701354166666
[2025-07-26 05:51:20] 2025-07-26 09:50:45,203 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6745066515/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,204 | INFO     | extracted standard info from prmon json
[2025-07-26 05:51:20] 2025-07-26 09:50:45,204 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 05:51:20] 2025-07-26 09:50:45,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 05:51:20] 2025-07-26 09:50:45,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 05:51:20] 2025-07-26 09:50:45,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 05:51:20] 2025-07-26 09:50:45,208 | INFO     | fitting pss+swap vs Time
[2025-07-26 05:51:20] 2025-07-26 09:50:45,209 | INFO     | sum of square deviations: 2790281333.9807787
[2025-07-26 05:51:20] 2025-07-26 09:50:45,210 | INFO     | sum of deviations: -26001042093.39423
[2025-07-26 05:51:20] 2025-07-26 09:50:45,210 | INFO     | mean x: 1753517085.9903846
[2025-07-26 05:51:20] 2025-07-26 09:50:45,210 | INFO     | mean y: 2165635.8028846155
[2025-07-26 05:51:20] 2025-07-26 09:50:45,210 | INFO     | -- intersect: 16342192359.658703
[2025-07-26 05:51:20] 2025-07-26 09:50:45,210 | INFO     | intersect: 16342192359.658703
[2025-07-26 05:51:20] 2025-07-26 09:50:45,211 | INFO     | chi2: 3.624823321057125
[2025-07-26 05:51:20] 2025-07-26 09:50:45,211 | INFO     | sum of square deviations: 2593855598.7389135
[2025-07-26 05:51:20] 2025-07-26 09:50:45,212 | INFO     | sum of deviations: -11107159743.014763
[2025-07-26 05:51:20] 2025-07-26 09:50:45,212 | INFO     | mean x: 1753516933.492611
[2025-07-26 05:51:20] 2025-07-26 09:50:45,213 | INFO     | mean y: 2177025.9901477834
[2025-07-26 05:51:20] 2025-07-26 09:50:45,213 | INFO     | -- intersect: 7510919109.340122
[2025-07-26 05:51:20] 2025-07-26 09:50:45,213 | INFO     | intersect: 7510919109.340122
[2025-07-26 05:51:20] 2025-07-26 09:50:45,213 | INFO     | chi2: 2.8853856854319737
[2025-07-26 05:51:20] 2025-07-26 09:50:45,213 | INFO     | current chi2=2.8853856854319737 (change=20.39927384404229 %)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,213 | INFO     | right removable region: 202
[2025-07-26 05:51:20] 2025-07-26 09:50:45,214 | INFO     | sum of square deviations: 2593818632.748752
[2025-07-26 05:51:20] 2025-07-26 09:50:45,215 | INFO     | sum of deviations: -66026909376.408844
[2025-07-26 05:51:20] 2025-07-26 09:50:45,215 | INFO     | mean x: 1753517238.502463
[2025-07-26 05:51:20] 2025-07-26 09:50:45,215 | INFO     | mean y: 2196540.81773399
[2025-07-26 05:51:20] 2025-07-26 09:50:45,215 | INFO     | -- intersect: 44638827003.24825
[2025-07-26 05:51:20] 2025-07-26 09:50:45,215 | INFO     | intersect: 44638827003.24825
[2025-07-26 05:51:20] 2025-07-26 09:50:45,216 | INFO     | chi2: 1.405546176183235
[2025-07-26 05:51:20] 2025-07-26 09:50:45,216 | INFO     | current chi2=1.405546176183235 (change=61.2244224975542 %)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,216 | INFO     | sum of square deviations: 2406810229.9797997
[2025-07-26 05:51:20] 2025-07-26 09:50:45,217 | INFO     | sum of deviations: -76024707351.56564
[2025-07-26 05:51:20] 2025-07-26 09:50:45,217 | INFO     | mean x: 1753517391.010101
[2025-07-26 05:51:20] 2025-07-26 09:50:45,217 | INFO     | mean y: 2204636.282828283
[2025-07-26 05:51:20] 2025-07-26 09:50:45,217 | INFO     | -- intersect: 55391135939.164444
[2025-07-26 05:51:20] 2025-07-26 09:50:45,217 | INFO     | intersect: 55391135939.164444
[2025-07-26 05:51:20] 2025-07-26 09:50:45,218 | INFO     | chi2: 1.159933639612412
[2025-07-26 05:51:20] 2025-07-26 09:50:45,218 | INFO     | current chi2=1.159933639612412 (change=17.47452632525988 %)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,218 | INFO     | left removable region: 20
[2025-07-26 05:51:20] 2025-07-26 09:50:45,218 | INFO     | sum of square deviations: 1869242540.9945054
[2025-07-26 05:51:20] 2025-07-26 09:50:45,219 | INFO     | sum of deviations: -48745461782.96159
[2025-07-26 05:51:20] 2025-07-26 09:50:45,219 | INFO     | mean x: 1753517512.9945054
[2025-07-26 05:51:20] 2025-07-26 09:50:45,220 | INFO     | mean y: 2206744.0384615385
[2025-07-26 05:51:20] 2025-07-26 09:50:45,220 | INFO     | -- intersect: 45729831191.29246
[2025-07-26 05:51:20] 2025-07-26 09:50:45,220 | INFO     | intersect: 45729831191.29246
[2025-07-26 05:51:20] 2025-07-26 09:50:45,220 | INFO     | chi2: 0.3528220568965065
[2025-07-26 05:51:20] 2025-07-26 09:50:45,220 | INFO     | -- intersect: 45729831191.29246
[2025-07-26 05:51:20] 2025-07-26 09:50:45,220 | INFO     | current memory leak: -26.08 B/s (using 182 data points, chi2=0.35)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | could have reported an average CPU frequency of 2567 MHz (10 samples)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | ..............................
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . Timing measurements:
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . get job = 0 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . initial setup = 7 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . payload setup = 62 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . stage-in = 0 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . payload execution = 12659 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . stage-out = 4 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | . log creation = 1 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,221 | INFO     | ..............................
[2025-07-26 05:51:20] 2025-07-26 09:50:45,598 | INFO     | 
[2025-07-26 05:51:20] 2025-07-26 09:50:45,598 | INFO     | job summary report
[2025-07-26 05:51:20] 2025-07-26 09:50:45,598 | INFO     | --------------------------------------------------
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | PanDA job id: 6745066515
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | task id: 45743349
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | errors: (none)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | pilot state: finished 
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | transexitcode: 0
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | exeerrorcode: 0
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | exeerrordiag: 
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | exitcode: 0
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | exitmsg: OK
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | cpuconsumptiontime: 49695 s
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | nevents: 400
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | neventsw: 0
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | pid: 2514682
[2025-07-26 05:51:20] 2025-07-26 09:50:45,599 | INFO     | pgrp: 2514682
[2025-07-26 05:51:20] 2025-07-26 09:50:45,600 | INFO     | corecount: 8
[2025-07-26 05:51:20] 2025-07-26 09:50:45,600 | INFO     | event service: False
[2025-07-26 05:51:20] 2025-07-26 09:50:45,600 | INFO     | sizes: {0: 2397304, 1: 2397503, 2: 2397503, 13: 2397531, 24: 2397587, 35: 2397615, 37: 2398033, 46: 2398061, 12727: 2427821, 12733: 2436875, 12766: 2437013}
[2025-07-26 05:51:20] 2025-07-26 09:50:45,600 | INFO     | --------------------------------------------------
[2025-07-26 05:51:20] 2025-07-26 09:50:45,600 | INFO     | 
[2025-07-26 05:51:20] 2025-07-26 09:50:45,600 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-26 05:51:20] 2025-07-26 09:50:45,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 05:51:20] 2025-07-26 09:50:45,676 | INFO     | job 6745066515 has completed (purged errors)
[2025-07-26 05:51:20] 2025-07-26 09:50:45,677 | INFO     | overall cleanup function is called
[2025-07-26 05:51:20] 2025-07-26 09:50:46,689 | INFO     | --- collectZombieJob: --- 10, [2514682]
[2025-07-26 05:51:20] 2025-07-26 09:50:46,689 | INFO     | zombie collector waiting for pid 2514682
[2025-07-26 05:51:20] 2025-07-26 09:50:46,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 05:51:20] 2025-07-26 09:50:46,690 | INFO     | collected zombie processes
[2025-07-26 05:51:20] 2025-07-26 09:50:46,690 | INFO     | will attempt to kill all subprocesses of pid=2514682
[2025-07-26 05:51:20] 2025-07-26 09:50:49,180 | INFO     | process IDs to be killed: [2514682] (in reverse order)
[2025-07-26 05:51:20] 2025-07-26 09:50:49,541 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 05:51:20] 2025-07-26 09:50:49,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 05:51:20] 2025-07-26 09:50:49,714 | INFO     | did not find any defunct processes belonging to 2514682
[2025-07-26 05:51:20] 2025-07-26 09:50:49,823 | INFO     | did not find any defunct processes belonging to 2514682
[2025-07-26 05:51:20] 2025-07-26 09:50:49,823 | INFO     | ready for new job
[2025-07-26 05:51:20] 2025-07-26 09:50:49,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 05:51:20] 2025-07-26 09:50:49,839 | INFO     | ***************************************
[2025-07-26 05:51:20] 2025-07-26 09:50:49,839 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 05:51:20] 2025-07-26 09:50:49,839 | INFO     | ***************************************
[2025-07-26 05:51:20] 2025-07-26 09:50:49,839 | INFO     | 
[2025-07-26 05:51:20] 2025-07-26 09:50:49,869 | INFO     | architecture information:
[2025-07-26 05:51:20] 2025-07-26 09:50:49,874 | INFO     | executing command: cat /etc/os-release
[2025-07-26 05:51:20] 2025-07-26 09:50:49,925 | INFO     | cat /etc/os-release:
[2025-07-26 05:51:20] NAME="CentOS Linux"
[2025-07-26 05:51:20] VERSION="7 (Core)"
[2025-07-26 05:51:20] ID="centos"
[2025-07-26 05:51:20] ID_LIKE="rhel fedora"
[2025-07-26 05:51:20] VERSION_ID="7"
[2025-07-26 05:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 05:51:20] ANSI_COLOR="0;31"
[2025-07-26 05:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 05:51:20] HOME_URL="https://www.centos.org/"
[2025-07-26 05:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 05:51:20] 
[2025-07-26 05:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 05:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 05:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 05:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 05:51:20] 
[2025-07-26 05:51:20] 2025-07-26 09:50:49,925 | INFO     | ***************************************
[2025-07-26 05:51:20] 2025-07-26 09:50:50,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-26 05:51:20] 2025-07-26 09:50:50,548 | INFO     | sufficient remaining disk space (432993730560 B)
[2025-07-26 05:51:20] 2025-07-26 09:50:50,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 05:51:20] 2025-07-26 09:50:50,549 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 05:51:20] 2025-07-26 09:50:50,549 | INFO     | update_server=False
[2025-07-26 05:51:20] 2025-07-26 09:50:50,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 05:51:20] 2025-07-26 09:50:50,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:51:20] 2025-07-26 09:50:50,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 05:51:20] 2025-07-26 09:50:50,773 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 05:51:20] 2025-07-26 09:50:50,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 05:51:20] 2025-07-26 09:50:50,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 05:51:20] 2025-07-26 09:50:50,774 | INFO     | will abort loop
[2025-07-26 05:51:20] 2025-07-26 09:50:50,791 | INFO     | all job control threads have been joined
[2025-07-26 05:51:20] 2025-07-26 09:50:50,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 05:51:20] 2025-07-26 09:50:51,395 | INFO     | all data control threads have been joined
[2025-07-26 05:51:20] 2025-07-26 09:50:51,555 | INFO     | [job] retrieve thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,559 | INFO     | [job] queue monitor thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,593 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,597 | INFO     | [data] copytool_in thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,665 | INFO     | [payload] failed_post thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,779 | INFO     | [job] job monitor thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,797 | INFO     | [job] control thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,899 | INFO     | [payload] validate_post thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:51,914 | INFO     | all payload control threads have been joined
[2025-07-26 05:51:20] 2025-07-26 09:50:52,107 | INFO     | [job] validate thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:52,182 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:52,401 | INFO     | [data] control thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:52,530 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:52,807 | INFO     | [data] copytool_out thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:52,944 | INFO     | [payload] control thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:54,653 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 05:51:20] 2025-07-26 09:50:55,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429128513344)>', '<ExcThread(monitor, started 140428611397376)>']
[2025-07-26 05:51:20] 2025-07-26 09:51:00,268 | INFO     | all workflow threads have been joined
[2025-07-26 05:51:20] 2025-07-26 09:51:00,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 05:51:20] 2025-07-26 09:51:00,268 | INFO     | traces error code: 0
[2025-07-26 05:51:20] 2025-07-26 09:51:00,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 05:51:20] 2025-07-26 09:51:19,608 | INFO     | PID=2501923 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 05:51:20] 2025-07-26 09:51:19,609 | INFO     | .. there are 77 such processes running
[2025-07-26 05:51:20] 2025-07-26 09:51:19,609 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 05:51:20] 2025-07-26 09:51:19,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 05:51:20] 2025-07-26 09:51:19,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 05:51:20] 2025-07-26 09:51:19,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 05:51:20] 2025-07-26 09:51:19,609 | INFO     | [monitor] control thread has ended
[2025-07-26 05:51:20] 2025-07-26 09:51:19,849 [wrapper] ==== pilot stdout END ====
[2025-07-26 05:51:20] 2025-07-26 09:51:19,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 05:51:20] 2025-07-26 09:51:19,924 [wrapper] pilotpid: 2501923
[2025-07-26 05:51:20] 2025-07-26 09:51:19,959 [wrapper] Pilot exit status: 0
[2025-07-26 05:51:20] 2025-07-26 09:51:20,067 [wrapper] pandaids: 6745066515
[2025-07-26 05:51:20] 2025-07-26 09:51:20,237 [wrapper] cleanup supervisor_pilot 3432344 2501924
[2025-07-26 05:51:20] 2025-07-26 09:51:20,240 [wrapper] Test setup, not cleaning
[2025-07-26 05:51:20] 2025-07-26 09:51:20,242 [wrapper] apfmon messages muted
[2025-07-26 05:51:20] 2025-07-26 09:51:20,244 [wrapper] ==== wrapper stdout END ====
[2025-07-26 05:51:20] 2025-07-26 09:51:20,246 [wrapper] ==== wrapper stderr END ====
[2025-07-26 05:51:20]  *** Error codes and diagnostics ***
[2025-07-26 05:51:20]     "exeErrorCode": 0,
[2025-07-26 05:51:20]     "exeErrorDiag": "",
[2025-07-26 05:51:20]     "pilotErrorCode": 0,
[2025-07-26 05:51:20]     "pilotErrorDiag": "",
[2025-07-26 05:51:20]  *** Listing of results directory ***
[2025-07-26 05:51:20] total 350764
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 20:06 pilot3.tar.gz
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 20:11 queuedata.json
[2025-07-26 05:51:20] -rwx------. 1 boincer umatlas     36292 Jul 25 20:12 runpilot2-wrapper.sh
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas       100 Jul 26 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 05:51:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 02:15 run_atlas
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas       105 Jul 26 02:15 job.xml
[2025-07-26 05:51:20] -rw-r--r--. 2 boincer umatlas 143894707 Jul 26 02:15 EVNT.45743347._001637.pool.root.1
[2025-07-26 05:51:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 02:15 start_atlas.sh
[2025-07-26 05:51:20] drwxrwx--x. 2 boincer umatlas        68 Jul 26 02:15 shared
[2025-07-26 05:51:20] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 02:15 input.tar.gz
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas         0 Jul 26 02:15 boinc_lockfile
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas      2563 Jul 26 02:15 pandaJob.out
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas    980001 Jul 26 02:16 agis_schedconf.cvmfs.json
[2025-07-26 05:51:20] drwx------. 4 boincer umatlas      4096 Jul 26 02:16 pilot3
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas      6880 Jul 26 05:47 init_data.xml
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas 208694982 Jul 26 05:48 HITS.45743349._029185.pool.root.1
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas       531 Jul 26 05:49 boinc_task_state.xml
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas      1037 Jul 26 05:50 memory_monitor_summary.json
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas   1593052 Jul 26 05:50 agis_ddmendpoints.agis.ALL.json
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas    372144 Jul 26 05:50 log.45743349._029185.job.log.tgz.1
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas        95 Jul 26 05:50 pilot_heartbeat.json
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas      7826 Jul 26 05:50 heartbeat.json
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 05:51 boinc_mmap_file
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas        28 Jul 26 05:51 wrapper_checkpoint.txt
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas       823 Jul 26 05:51 pilotlog.txt
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas    989941 Jul 26 05:51 log.45743349._029185.job.log.1
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas       357 Jul 26 05:51 output.list
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas       620 Jul 26 05:51 runtime_log
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas   1382400 Jul 26 05:51 result.tar.gz
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas       655 Jul 26 05:51 xU5LDmwhhz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4mQLDmgkM7cn.diag
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas      8656 Jul 26 05:51 runtime_log.err
[2025-07-26 05:51:20] -rw-r--r--. 1 boincer umatlas     21253 Jul 26 05:51 stderr.txt
[2025-07-26 05:51:20] HITS file was successfully produced:
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas 208694982 Jul 26 05:48 shared/HITS.pool.root.1
[2025-07-26 05:51:20]  *** Contents of shared directory: ***
[2025-07-26 05:51:20] total 346232
[2025-07-26 05:51:20] -rw-r--r--. 2 boincer umatlas 143894707 Jul 26 02:15 ATLAS.root_0
[2025-07-26 05:51:20] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 02:15 start_atlas.sh
[2025-07-26 05:51:20] -rw-r--r--. 2 boincer umatlas    542892 Jul 26 02:15 input.tar.gz
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas 208694982 Jul 26 05:48 HITS.pool.root.1
[2025-07-26 05:51:20] -rw-------. 1 boincer umatlas   1382400 Jul 26 05:51 result.tar.gz
05:51:22 (2495803): run_atlas exited; CPU time 50509.870098
05:51:22 (2495803): called boinc_finish(0)

</stderr_txt>
]]>

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