Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:13:13 (3461581): wrapper (7.7.26015): starting
02:13:13 (3461581): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 02:13:13] Arguments: --nthreads 8
[2025-07-26 02:13:13] Threads: 8
[2025-07-26 02:13:13] Checking for CVMFS
[2025-07-26 02:13:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 02:13:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 02:13:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 02:13:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 02:13:13] 2.13.1.0 3153527 6556 139844 148766 2 57 21938531 40960001 12841 16776704 0 84909031 99.999 238650 57686 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 02:13:13] CVMFS is ok
[2025-07-26 02:13:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 02:13:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 02:13:13] Further information can be found at the LHC@home message board.
[2025-07-26 02:13:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 02:13:13] Checking for apptainer binary...
[2025-07-26 02:13:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 02:13:13] Running /usr/bin/apptainer --version
[2025-07-26 02:13:13] apptainer version 1.4.1-1.el9
[2025-07-26 02:13:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 02:13:13] c-208-37.aglt2.org
[2025-07-26 02:13:13] apptainer works
[2025-07-26 02:13:13] Set ATHENA_PROC_NUMBER=8
[2025-07-26 02:13:13] Set ATHENA_CORE_NUMBER=8
[2025-07-26 02:13:13] Starting ATLAS job with PandaID=6745065930
[2025-07-26 02:13:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 03:11:17]  *** The last 200 lines of the pilot log: ***
[2025-07-26 03:11:17] 2025-07-26 07:10:38,126 | INFO     | transferring file log.45743349._028870.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745065930/log.45743349._028870.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 03:11:17] 2025-07-26 07:10:38,126 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745065930/log.45743349._028870.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._028870.job
[2025-07-26 03:11:17] 2025-07-26 07:10:38,147 | INFO     | adding to output.list: log.45743349._028870.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7a/20/log.45743349._028870.job.log.tg
[2025-07-26 03:11:17] 2025-07-26 07:10:38,147 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 03:11:17] 2025-07-26 07:10:38,147 | INFO     | summary of transferred files:
[2025-07-26 03:11:17] 2025-07-26 07:10:38,148 | INFO     |  -- lfn=log.45743349._028870.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 03:11:17] 2025-07-26 07:10:38,148 | INFO     | stage-out finished correctly
[2025-07-26 03:11:17] 2025-07-26 07:10:38,935 | INFO     | 3438s have passed since pilot start - server update state is 'RUNNING'
[2025-07-26 03:11:17] 2025-07-26 07:10:40,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 03:11:17] 2025-07-26 07:10:41,377 | WARNING  | process 3475039 can no longer be monitored (due to stat problems) - aborting
[2025-07-26 03:11:17] 2025-07-26 07:10:41,377 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745065930/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745065930/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,379 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3338734 B
[2025-07-26 03:11:17] 2025-07-26 07:10:41,379 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15777 B
[2025-07-26 03:11:17] 2025-07-26 07:10:41,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 03:11:17] 2025-07-26 07:10:41,393 | INFO     | sufficient remaining disk space (165439078400 B)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,394 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,394 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745065930: 3629104 B (within 2537553920 B limit)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,394 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745065930/HITS.45743349._028870.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,395 | INFO     | total size of present files: 0 B (workdir size: 3629104 B)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,395 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745065930/HITS.45743349._028870.pool.root.1 since it does not exist
[2025-07-26 03:11:17] 2025-07-26 07:10:41,730 | INFO     | number of running child processes to parent process 3475039: 1
[2025-07-26 03:11:17] 2025-07-26 07:10:41,730 | INFO     | maximum number of monitored processes: 6
[2025-07-26 03:11:17] 2025-07-26 07:10:41,733 | INFO     | job 6745065930 has state=finished
[2025-07-26 03:11:17] 2025-07-26 07:10:41,734 | INFO     | preparing for final server update for job 6745065930 in state='finished'
[2025-07-26 03:11:17] 2025-07-26 07:10:41,734 | INFO     | this job has now completed (state=finished)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,734 | INFO     | log transfer has been attempted: DONE
[2025-07-26 03:11:17] 2025-07-26 07:10:41,734 | INFO     | job 6745065930 has finished - writing final server update
[2025-07-26 03:11:17] 2025-07-26 07:10:41,734 | INFO     | total number of processed events: 400 (read)
[2025-07-26 03:11:17] 2025-07-26 07:10:41,735 | INFO     | executing command: lscpu
[2025-07-26 03:11:17] 2025-07-26 07:10:41,791 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 03:11:17] 2025-07-26 07:10:44,233 | INFO     | monitor loop #255: job 0:6745065930 is in state 'finished'
[2025-07-26 03:11:17] 2025-07-26 07:10:44,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 03:11:17] 2025-07-26 07:10:44,373 | INFO     | PID=3465463 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-26 03:11:17] 2025-07-26 07:10:44,373 | INFO     | .. there are 15 such processes running
[2025-07-26 03:11:17] 2025-07-26 07:10:45,084 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-26 03:11:17] 2025-07-26 07:10:45,088 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3778.712171875
[2025-07-26 03:11:17] 2025-07-26 07:10:45,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745065930/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 03:11:17] 2025-07-26 07:10:45,102 | INFO     | extracted standard info from prmon json
[2025-07-26 03:11:17] 2025-07-26 07:10:45,102 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 03:11:17] 2025-07-26 07:10:45,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 03:11:17] 2025-07-26 07:10:45,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 03:11:17] 2025-07-26 07:10:45,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 03:11:17] 2025-07-26 07:10:45,103 | INFO     | fitting pss+swap vs Time
[2025-07-26 03:11:17] 2025-07-26 07:10:45,103 | INFO     | sum of square deviations: 36465800.0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | sum of deviations: -403460893.0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | mean x: 1753512196.0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | mean y: 2534993.714285714
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | -- intersect: 19403551740.489376
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | intersect: 19403551740.489376
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | chi2: 0.0019212483476699618
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | -- intersect: 19403551740.489376
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | current memory leak: -11.06 B/s (using 49 data points, chi2=0.00)
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | could have reported an average CPU frequency of 3761 MHz (5 samples)
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | ..............................
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | . Timing measurements:
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | . get job = 0 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | . initial setup = 2 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | . payload setup = 5 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,104 | INFO     | . stage-in = 0 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,105 | INFO     | . payload execution = 3411 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,105 | INFO     | . stage-out = 0 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,105 | INFO     | . log creation = 0 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,105 | INFO     | ..............................
[2025-07-26 03:11:17] 2025-07-26 07:10:45,163 | INFO     | 
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | job summary report
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | --------------------------------------------------
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | PanDA job id: 6745065930
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | task id: 45743349
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | errors: (none)
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | pilot state: finished 
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | transexitcode: 0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | exeerrorcode: 0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | exeerrordiag: 
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | exitcode: 0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | exitmsg: OK
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | cpuconsumptiontime: 24595 s
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | nevents: 400
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | neventsw: 0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | pid: 3475039
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | pgrp: 3475039
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | corecount: 8
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | event service: False
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | sizes: {0: 2397424, 4: 2397686, 11: 2397714, 3421: 2432388, 3424: 2432388, 3428: 2432642}
[2025-07-26 03:11:17] 2025-07-26 07:10:45,164 | INFO     | --------------------------------------------------
[2025-07-26 03:11:17] 2025-07-26 07:10:45,165 | INFO     | 
[2025-07-26 03:11:17] 2025-07-26 07:10:45,165 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | job 6745065930 has completed (purged errors)
[2025-07-26 03:11:17] 2025-07-26 07:10:45,188 | INFO     | overall cleanup function is called
[2025-07-26 03:11:17] 2025-07-26 07:10:46,196 | INFO     | --- collectZombieJob: --- 10, [3475039]
[2025-07-26 03:11:17] 2025-07-26 07:10:46,197 | INFO     | zombie collector waiting for pid 3475039
[2025-07-26 03:11:17] 2025-07-26 07:10:46,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 03:11:17] 2025-07-26 07:10:46,197 | INFO     | collected zombie processes
[2025-07-26 03:11:17] 2025-07-26 07:10:46,197 | INFO     | will attempt to kill all subprocesses of pid=3475039
[2025-07-26 03:11:17] 2025-07-26 07:10:46,529 | INFO     | process IDs to be killed: [3475039] (in reverse order)
[2025-07-26 03:11:17] 2025-07-26 07:10:46,650 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 03:11:17] 2025-07-26 07:10:46,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 03:11:17] 2025-07-26 07:10:46,667 | INFO     | did not find any defunct processes belonging to 3475039
[2025-07-26 03:11:17] 2025-07-26 07:10:46,682 | INFO     | did not find any defunct processes belonging to 3475039
[2025-07-26 03:11:17] 2025-07-26 07:10:46,683 | INFO     | ready for new job
[2025-07-26 03:11:17] 2025-07-26 07:10:46,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 03:11:17] 2025-07-26 07:10:46,685 | INFO     | ***************************************
[2025-07-26 03:11:17] 2025-07-26 07:10:46,685 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 03:11:17] 2025-07-26 07:10:46,685 | INFO     | ***************************************
[2025-07-26 03:11:17] 2025-07-26 07:10:46,685 | INFO     | 
[2025-07-26 03:11:17] 2025-07-26 07:10:46,690 | INFO     | architecture information:
[2025-07-26 03:11:17] 2025-07-26 07:10:46,690 | INFO     | executing command: cat /etc/os-release
[2025-07-26 03:11:17] 2025-07-26 07:10:46,700 | INFO     | cat /etc/os-release:
[2025-07-26 03:11:17] NAME="CentOS Linux"
[2025-07-26 03:11:17] VERSION="7 (Core)"
[2025-07-26 03:11:17] ID="centos"
[2025-07-26 03:11:17] ID_LIKE="rhel fedora"
[2025-07-26 03:11:17] VERSION_ID="7"
[2025-07-26 03:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 03:11:17] ANSI_COLOR="0;31"
[2025-07-26 03:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 03:11:17] HOME_URL="https://www.centos.org/"
[2025-07-26 03:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 03:11:17] 
[2025-07-26 03:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 03:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 03:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 03:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 03:11:17] 
[2025-07-26 03:11:17] 2025-07-26 07:10:46,701 | INFO     | ***************************************
[2025-07-26 03:11:17] 2025-07-26 07:10:47,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 03:11:17] 2025-07-26 07:10:47,215 | INFO     | sufficient remaining disk space (165435932672 B)
[2025-07-26 03:11:17] 2025-07-26 07:10:47,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 03:11:17] 2025-07-26 07:10:47,215 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 03:11:17] 2025-07-26 07:10:47,215 | INFO     | update_server=False
[2025-07-26 03:11:17] 2025-07-26 07:10:47,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 03:11:17] 2025-07-26 07:10:47,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 03:11:17] 2025-07-26 07:10:47,216 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 03:11:17] 2025-07-26 07:10:47,293 | INFO     | all data control threads have been joined
[2025-07-26 03:11:17] 2025-07-26 07:10:47,479 | INFO     | all job control threads have been joined
[2025-07-26 03:11:17] 2025-07-26 07:10:47,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 03:11:17] 2025-07-26 07:10:47,742 | INFO     | aborting loop
[2025-07-26 03:11:17] 2025-07-26 07:10:48,218 | INFO     | [job] retrieve thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:48,233 | INFO     | all payload control threads have been joined
[2025-07-26 03:11:17] 2025-07-26 07:10:48,236 | INFO     | [payload] validate_post thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:48,296 | INFO     | [data] control thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:48,471 | INFO     | [payload] failed_post thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:48,484 | INFO     | [job] control thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:48,718 | INFO     | [data] copytool_in thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:48,742 | INFO     | [job] job monitor thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:49,103 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:49,222 | INFO     | [data] copytool_out thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:49,224 | INFO     | [job] validate thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:49,234 | INFO     | [payload] control thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:49,359 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:49,440 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:50,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 03:11:17] 2025-07-26 07:10:51,175 | INFO     | [job] queue monitor thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:51,222 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:10:57,706 | INFO     | job.realtimelogging is not enabled
[2025-07-26 03:11:17] 2025-07-26 07:10:58,711 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 03:11:17] 2025-07-26 07:11:00,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695262873408)>', '<ExcThread(monitor, started 139694473996032)>']
[2025-07-26 03:11:17] 2025-07-26 07:11:05,108 | INFO     | all workflow threads have been joined
[2025-07-26 03:11:17] 2025-07-26 07:11:05,108 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 03:11:17] 2025-07-26 07:11:05,109 | INFO     | traces error code: 0
[2025-07-26 03:11:17] 2025-07-26 07:11:05,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 03:11:17] 2025-07-26 07:11:16,870 | INFO     | PID=3465463 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 03:11:17] 2025-07-26 07:11:16,871 | INFO     | .. there are 15 such processes running
[2025-07-26 03:11:17] 2025-07-26 07:11:16,871 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 03:11:17] 2025-07-26 07:11:16,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 03:11:17] 2025-07-26 07:11:16,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 03:11:17] 2025-07-26 07:11:16,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 03:11:17] 2025-07-26 07:11:16,871 | INFO     | [monitor] control thread has ended
[2025-07-26 03:11:17] 2025-07-26 07:11:16,980 [wrapper] ==== pilot stdout END ====
[2025-07-26 03:11:17] 2025-07-26 07:11:16,982 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 03:11:17] 2025-07-26 07:11:16,984 [wrapper] pilotpid: 3465463
[2025-07-26 03:11:17] 2025-07-26 07:11:16,986 [wrapper] Pilot exit status: 0
[2025-07-26 03:11:17] 2025-07-26 07:11:16,994 [wrapper] pandaids: 6745065930
[2025-07-26 03:11:17] 2025-07-26 07:11:17,076 [wrapper] cleanup supervisor_pilot 3760813 3465465
[2025-07-26 03:11:17] 2025-07-26 07:11:17,078 [wrapper] Test setup, not cleaning
[2025-07-26 03:11:17] 2025-07-26 07:11:17,079 [wrapper] apfmon messages muted
[2025-07-26 03:11:17] 2025-07-26 07:11:17,081 [wrapper] ==== wrapper stdout END ====
[2025-07-26 03:11:17] 2025-07-26 07:11:17,083 [wrapper] ==== wrapper stderr END ====
[2025-07-26 03:11:17]  *** Error codes and diagnostics ***
[2025-07-26 03:11:17]     "exeErrorCode": 0,
[2025-07-26 03:11:17]     "exeErrorDiag": "",
[2025-07-26 03:11:17]     "pilotErrorCode": 0,
[2025-07-26 03:11:17]     "pilotErrorDiag": "",
[2025-07-26 03:11:17]  *** Listing of results directory ***
[2025-07-26 03:11:17] total 356252
[2025-07-26 03:11:17] -rwx------. 1 boincer umatlas     36292 Jul 25 19:44 runpilot2-wrapper.sh
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 19:44 queuedata.json
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 19:44 pilot3.tar.gz
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas       100 Jul 26 02:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 03:11:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 02:13 run_atlas
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas       105 Jul 26 02:13 job.xml
[2025-07-26 03:11:17] -rw-r--r--. 2 boincer umatlas 146770098 Jul 26 02:13 EVNT.45743347._001616.pool.root.1
[2025-07-26 03:11:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 02:13 start_atlas.sh
[2025-07-26 03:11:17] drwxrwx--x. 2 boincer umatlas      4096 Jul 26 02:13 shared
[2025-07-26 03:11:17] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 02:13 input.tar.gz
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas         0 Jul 26 02:13 boinc_lockfile
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 02:13 pandaJob.out
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas    980001 Jul 26 02:13 agis_schedconf.cvmfs.json
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas   1593052 Jul 26 02:13 agis_ddmendpoints.agis.ALL.json
[2025-07-26 03:11:17] drwx------. 4 boincer umatlas      4096 Jul 26 02:13 pilot3
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas      7174 Jul 26 03:01 init_data.xml
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas 212860140 Jul 26 03:10 HITS.45743349._028870.pool.root.1
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas       529 Jul 26 03:10 boinc_task_state.xml
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas      1027 Jul 26 03:10 memory_monitor_summary.json
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas        95 Jul 26 03:10 pilot_heartbeat.json
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas    296082 Jul 26 03:10 log.45743349._028870.job.log.tgz.1
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas      7768 Jul 26 03:10 heartbeat.json
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 03:11 boinc_mmap_file
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas        27 Jul 26 03:11 wrapper_checkpoint.txt
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas       823 Jul 26 03:11 pilotlog.txt
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas    354109 Jul 26 03:11 log.45743349._028870.job.log.1
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas       357 Jul 26 03:11 output.list
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas       620 Jul 26 03:11 runtime_log
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas    665600 Jul 26 03:11 result.tar.gz
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas      8660 Jul 26 03:11 runtime_log.err
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas       651 Jul 26 03:11 1NNODmkGhz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzjQLDmFtYuhm.diag
[2025-07-26 03:11:17] -rw-r--r--. 1 boincer umatlas     22808 Jul 26 03:11 stderr.txt
[2025-07-26 03:11:17] HITS file was successfully produced:
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas 212860140 Jul 26 03:10 shared/HITS.pool.root.1
[2025-07-26 03:11:17]  *** Contents of shared directory: ***
[2025-07-26 03:11:17] total 352408
[2025-07-26 03:11:17] -rw-r--r--. 2 boincer umatlas 146770098 Jul 26 02:13 ATLAS.root_0
[2025-07-26 03:11:17] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 02:13 start_atlas.sh
[2025-07-26 03:11:17] -rw-r--r--. 2 boincer umatlas    542890 Jul 26 02:13 input.tar.gz
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas 212860140 Jul 26 03:10 HITS.pool.root.1
[2025-07-26 03:11:17] -rw-------. 1 boincer umatlas    665600 Jul 26 03:11 result.tar.gz
03:11:18 (3461581): run_atlas exited; CPU time 24678.393821
03:11:18 (3461581): called boinc_finish(0)

</stderr_txt>
]]>

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