Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:12 (18453): wrapper (7.7.26015): starting
20:06:12 (18453): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 20:06:12] Arguments: --nthreads 8
[2025-07-26 20:06:12] Threads: 8
[2025-07-26 20:06:12] Checking for CVMFS
[2025-07-26 20:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 20:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 20:06:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 20:06:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 20:06:16] 2.11.2.0 17642 108422 110412 148785 3 11 18530967 25165824 4484 130560 0 80576907 99.860 53575229 3344 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-26 20:06:16] CVMFS is ok
[2025-07-26 20:06:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 20:06:16] Checking for apptainer binary...
[2025-07-26 20:06:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 20:06:16] Running /usr/bin/apptainer --version
[2025-07-26 20:06:16] apptainer version 1.3.2-1.el7
[2025-07-26 20:06:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 20:38:40] cg-vwn307.simple-grid.lan
[2025-07-26 20:38:40] apptainer works
[2025-07-26 20:38:40] Set ATHENA_PROC_NUMBER=8
[2025-07-26 20:38:40] Set ATHENA_CORE_NUMBER=8
[2025-07-26 20:38:40] Starting ATLAS job with PandaID=6745066351
[2025-07-26 20:38:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 01:41:05]  *** The last 200 lines of the pilot log: ***
[2025-07-27 01:41:05] 2025-07-26 23:22:53,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-27 01:41:05] 2025-07-26 23:22:53,039 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-07-27 01:41:05] 2025-07-26 23:22:53,041 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6745066351/memory_monitor_summary.json (trf name=prmon)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,042 | INFO     | extracted standard info from prmon json
[2025-07-27 01:41:05] 2025-07-26 23:22:53,042 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 01:41:05] 2025-07-26 23:22:53,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 01:41:05] 2025-07-26 23:22:53,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 01:41:05] 2025-07-26 23:22:53,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 01:41:05] 2025-07-26 23:22:53,048 | INFO     | fitting pss+swap vs Time
[2025-07-27 01:41:05] 2025-07-26 23:22:53,049 | INFO     | sum of square deviations: 6590404498.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,052 | INFO     | sum of deviations: 5278549477.999991
[2025-07-27 01:41:05] 2025-07-26 23:22:53,052 | INFO     | mean x: 1753563610.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,052 | INFO     | mean y: 2515832.527075812
[2025-07-27 01:41:05] 2025-07-26 23:22:53,052 | INFO     | -- intersect: -1401991626.9185917
[2025-07-27 01:41:05] 2025-07-26 23:22:53,052 | INFO     | intersect: -1401991626.9185917
[2025-07-27 01:41:05] 2025-07-26 23:22:53,053 | INFO     | chi2: 1.7399416141286046
[2025-07-27 01:41:05] 2025-07-26 23:22:53,054 | INFO     | sum of square deviations: 6239923508.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,056 | INFO     | sum of deviations: 5329191677.999989
[2025-07-27 01:41:05] 2025-07-26 23:22:53,056 | INFO     | mean x: 1753563457.5
[2025-07-27 01:41:05] 2025-07-26 23:22:53,057 | INFO     | mean y: 2515854.632352941
[2025-07-27 01:41:05] 2025-07-26 23:22:53,057 | INFO     | -- intersect: -1495110802.5811327
[2025-07-27 01:41:05] 2025-07-26 23:22:53,057 | INFO     | intersect: -1495110802.5811327
[2025-07-27 01:41:05] 2025-07-26 23:22:53,057 | INFO     | chi2: 1.7402798759354003
[2025-07-27 01:41:05] 2025-07-26 23:22:53,057 | INFO     | current chi2=1.7402798759354003 (change=-0.019440986068096057 %)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,058 | INFO     | right removable region: 271
[2025-07-27 01:41:05] 2025-07-26 23:22:53,058 | INFO     | sum of square deviations: 6239923508.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,061 | INFO     | sum of deviations: -40970164287.5
[2025-07-27 01:41:05] 2025-07-26 23:22:53,061 | INFO     | mean x: 1753563762.5
[2025-07-27 01:41:05] 2025-07-26 23:22:53,061 | INFO     | mean y: 2535811.7389705884
[2025-07-27 01:41:05] 2025-07-26 23:22:53,061 | INFO     | -- intersect: 11516105705.043444
[2025-07-27 01:41:05] 2025-07-26 23:22:53,061 | INFO     | intersect: 11516105705.043444
[2025-07-27 01:41:05] 2025-07-26 23:22:53,062 | INFO     | chi2: 0.1938477386897732
[2025-07-27 01:41:05] 2025-07-26 23:22:53,062 | INFO     | current chi2=0.1938477386897732 (change=88.85895152367766 %)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,062 | INFO     | sum of square deviations: 5902093918.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,065 | INFO     | sum of deviations: -41493137570.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,065 | INFO     | mean x: 1753563915.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,065 | INFO     | mean y: 2536024.9101123596
[2025-07-27 01:41:05] 2025-07-26 23:22:53,065 | INFO     | -- intersect: 12330511447.49348
[2025-07-27 01:41:05] 2025-07-26 23:22:53,065 | INFO     | intersect: 12330511447.49348
[2025-07-27 01:41:05] 2025-07-26 23:22:53,066 | INFO     | chi2: 0.17673637571536127
[2025-07-27 01:41:05] 2025-07-26 23:22:53,066 | INFO     | current chi2=0.17673637571536127 (change=8.827218253908201 %)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,066 | INFO     | left removable region: 20
[2025-07-27 01:41:05] 2025-07-26 23:22:53,066 | INFO     | sum of square deviations: 4903347750.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,069 | INFO     | sum of deviations: -23433415899.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,069 | INFO     | mean x: 1753564037.0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,069 | INFO     | mean y: 2527998.035856574
[2025-07-27 01:41:05] 2025-07-26 23:22:53,069 | INFO     | -- intersect: 8382923898.887561
[2025-07-27 01:41:05] 2025-07-26 23:22:53,069 | INFO     | intersect: 8382923898.887561
[2025-07-27 01:41:05] 2025-07-26 23:22:53,069 | INFO     | chi2: 0.13340572520910807
[2025-07-27 01:41:05] 2025-07-26 23:22:53,070 | INFO     | -- intersect: 8382923898.887561
[2025-07-27 01:41:05] 2025-07-26 23:22:53,070 | INFO     | current memory leak: -4.78 B/s (using 251 data points, chi2=0.13)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | ..............................
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . Timing measurements:
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . get job = 0 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . initial setup = 2 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . payload setup = 12 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . stage-in = 0 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . payload execution = 16913 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,071 | INFO     | . stage-out = 2 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,072 | INFO     | . log creation = 0 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,072 | INFO     | ..............................
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | 
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | job summary report
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | --------------------------------------------------
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | PanDA job id: 6745066351
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | task id: 45743349
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | errors: (none)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 01:41:05] 2025-07-26 23:22:53,204 | INFO     | pilot state: finished 
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | transexitcode: 0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | exeerrorcode: 0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | exeerrordiag: 
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | exitcode: 0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | exitmsg: OK
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | cpuconsumptiontime: 64779 s
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | nevents: 400
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | neventsw: 0
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | pid: 29571
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | pgrp: 29571
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | corecount: 8
[2025-07-27 01:41:05] 2025-07-26 23:22:53,205 | INFO     | event service: False
[2025-07-27 01:41:05] 2025-07-26 23:22:53,206 | INFO     | sizes: {0: 2397475, 1: 2397475, 8: 2397765, 11: 2397793, 16930: 2429162, 16934: 2438344, 17013: 2438482}
[2025-07-27 01:41:05] 2025-07-26 23:22:53,206 | INFO     | --------------------------------------------------
[2025-07-27 01:41:05] 2025-07-26 23:22:53,206 | INFO     | 
[2025-07-27 01:41:05] 2025-07-26 23:22:53,206 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-27 01:41:05] 2025-07-26 23:22:53,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 01:41:05] 2025-07-26 23:22:53,711 | INFO     | job 6745066351 has completed (purged errors)
[2025-07-27 01:41:05] 2025-07-26 23:22:53,712 | INFO     | overall cleanup function is called
[2025-07-27 01:41:05] 2025-07-26 23:22:54,721 | INFO     | --- collectZombieJob: --- 10, [29571]
[2025-07-27 01:41:05] 2025-07-26 23:22:54,721 | INFO     | zombie collector waiting for pid 29571
[2025-07-27 01:41:05] 2025-07-26 23:22:54,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 01:41:05] 2025-07-26 23:22:54,721 | INFO     | collected zombie processes
[2025-07-27 01:41:05] 2025-07-26 23:22:54,721 | INFO     | will attempt to kill all subprocesses of pid=29571
[2025-07-27 01:41:05] 2025-07-26 23:22:54,827 | INFO     | process IDs to be killed: [29571] (in reverse order)
[2025-07-27 01:41:05] 2025-07-26 23:22:55,306 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 01:41:05] 2025-07-26 23:22:55,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 01:41:05] 2025-07-26 23:22:55,310 | INFO     | did not find any defunct processes belonging to 29571
[2025-07-27 01:41:05] 2025-07-26 23:22:55,313 | INFO     | did not find any defunct processes belonging to 29571
[2025-07-27 01:41:05] 2025-07-26 23:22:55,313 | INFO     | ready for new job
[2025-07-27 01:41:05] 2025-07-26 23:22:55,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 01:41:05] 2025-07-26 23:22:55,315 | INFO     | ***************************************
[2025-07-27 01:41:05] 2025-07-26 23:22:55,315 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 01:41:05] 2025-07-26 23:22:55,316 | INFO     | ***************************************
[2025-07-27 01:41:05] 2025-07-26 23:22:55,316 | INFO     | 
[2025-07-27 01:41:05] 2025-07-26 23:22:55,317 | INFO     | pilot is running in a VM
[2025-07-27 01:41:05] 2025-07-26 23:22:55,317 | INFO     | architecture information:
[2025-07-27 01:41:05] 2025-07-26 23:22:55,317 | INFO     | executing command: cat /etc/os-release
[2025-07-27 01:41:05] 2025-07-26 23:22:55,485 | INFO     | cat /etc/os-release:
[2025-07-27 01:41:05] NAME="CentOS Linux"
[2025-07-27 01:41:05] VERSION="7 (Core)"
[2025-07-27 01:41:05] ID="centos"
[2025-07-27 01:41:05] ID_LIKE="rhel fedora"
[2025-07-27 01:41:05] VERSION_ID="7"
[2025-07-27 01:41:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 01:41:05] ANSI_COLOR="0;31"
[2025-07-27 01:41:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 01:41:05] HOME_URL="https://www.centos.org/"
[2025-07-27 01:41:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 01:41:05] 
[2025-07-27 01:41:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 01:41:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 01:41:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 01:41:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 01:41:05] 
[2025-07-27 01:41:05] 2025-07-26 23:22:55,485 | INFO     | ***************************************
[2025-07-27 01:41:05] 2025-07-26 23:22:55,988 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-27 01:41:05] 2025-07-26 23:22:56,137 | INFO     | sufficient remaining disk space (496884514816 B)
[2025-07-27 01:41:05] 2025-07-26 23:22:56,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 01:41:05] 2025-07-26 23:22:56,138 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 01:41:05] 2025-07-26 23:22:56,138 | INFO     | update_server=False
[2025-07-27 01:41:05] 2025-07-26 23:22:56,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 01:41:05] 2025-07-26 23:22:56,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-27 01:41:05] 2025-07-26 23:22:56,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-27 01:41:05] 2025-07-26 23:22:56,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:41:05] 2025-07-26 23:22:56,337 | INFO     | will abort loop
[2025-07-27 01:41:05] 2025-07-26 23:22:56,547 | INFO     | all job control threads have been joined
[2025-07-27 01:41:05] 2025-07-26 23:22:56,601 | INFO     | all payload control threads have been joined
[2025-07-27 01:41:05] 2025-07-26 23:22:56,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 01:41:05] 2025-07-26 23:22:57,063 | INFO     | all data control threads have been joined
[2025-07-27 01:41:05] 2025-07-26 23:22:57,145 | INFO     | [job] retrieve thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 01:41:05] 2025-07-26 23:22:57,344 | INFO     | [job] job monitor thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,554 | INFO     | [job] control thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,607 | INFO     | [payload] control thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,828 | INFO     | [data] copytool_in thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,920 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,937 | INFO     | [job] validate thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:57,976 | INFO     | [payload] failed_post thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:58,073 | INFO     | [data] control thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:58,130 | INFO     | [payload] validate_post thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:58,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 01:41:05] 2025-07-26 23:22:58,450 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:58,631 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:59,162 | INFO     | [data] copytool_out thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:22:59,226 | INFO     | [job] queue monitor thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:23:00,791 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:23:06,354 | INFO     | job.realtimelogging is not enabled
[2025-07-27 01:41:05] 2025-07-26 23:23:07,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 01:41:05] 2025-07-26 23:23:09,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396315244352)>', '<ExcThread(monitor, started 140395862271744)>']
[2025-07-27 01:41:05] 2025-07-26 23:23:14,407 | INFO     | all workflow threads have been joined
[2025-07-27 01:41:05] 2025-07-26 23:23:14,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 01:41:05] 2025-07-26 23:23:14,407 | INFO     | traces error code: 0
[2025-07-27 01:41:05] 2025-07-26 23:23:14,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 01:41:05] 2025-07-26 23:23:26,195 | INFO     | PID=22985 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-27 01:41:05] 2025-07-26 23:23:26,195 | INFO     | .. there are 9 such processes running
[2025-07-27 01:41:05] 2025-07-26 23:23:26,197 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 01:41:05] 2025-07-26 23:23:26,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 01:41:05] 2025-07-26 23:23:26,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 01:41:05] 2025-07-26 23:23:26,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 01:41:05] 2025-07-26 23:23:26,197 | INFO     | [monitor] control thread has ended
[2025-07-27 01:41:05] 2025-07-26 23:23:26,396 [wrapper] ==== pilot stdout END ====
[2025-07-27 01:41:05] 2025-07-26 23:23:26,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 01:41:05] 2025-07-26 23:23:26,568 [wrapper] pilotpid: 22985
[2025-07-27 01:41:05] 2025-07-26 23:23:26,673 [wrapper] Pilot exit status: 0
[2025-07-27 01:41:05] 2025-07-26 23:23:27,157 [wrapper] pandaids: 6745066351
[2025-07-27 01:41:05] 2025-07-26 23:23:28,090 [wrapper] cleanup supervisor_pilot 29376 22986
[2025-07-27 01:41:05] 2025-07-26 23:23:28,144 [wrapper] Test setup, not cleaning
[2025-07-27 01:41:05] 2025-07-26 23:23:28,230 [wrapper] apfmon messages muted
[2025-07-27 01:41:05] 2025-07-26 23:23:28,266 [wrapper] ==== wrapper stdout END ====
[2025-07-27 01:41:05] 2025-07-26 23:23:28,328 [wrapper] ==== wrapper stderr END ====
[2025-07-27 01:41:05]  *** Error codes and diagnostics ***
[2025-07-27 01:41:05]     "exeErrorCode": 0,
[2025-07-27 01:41:05]     "exeErrorDiag": "",
[2025-07-27 01:41:05]     "pilotErrorCode": 0,
[2025-07-27 01:41:05]     "pilotErrorDiag": "",
[2025-07-27 01:41:05]  *** Listing of results directory ***
[2025-07-27 01:41:05] total 358088
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc    530466 Jul 26 01:55 pilot3.tar.gz
[2025-07-27 01:41:05] -rwx------. 1 boinc boinc     36292 Jul 26 01:55 runpilot2-wrapper.sh
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc      5112 Jul 26 01:55 queuedata.json
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc       100 Jul 26 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 01:41:05] -rwxr-xr-x. 1 boinc boinc      7986 Jul 26 20:06 run_atlas
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc       105 Jul 26 20:06 job.xml
[2025-07-27 01:41:05] -rw-r--r--. 2 boinc boinc 142995030 Jul 26 20:06 EVNT.45743347._001626.pool.root.1
[2025-07-27 01:41:05] -rw-r--r--. 2 boinc boinc    542888 Jul 26 20:06 input.tar.gz
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc      6389 Jul 26 20:06 init_data.xml
[2025-07-27 01:41:05] -rw-r--r--. 2 boinc boinc     15095 Jul 26 20:06 start_atlas.sh
[2025-07-27 01:41:05] drwxrwx--x. 2 boinc boinc        68 Jul 26 20:06 shared
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc         0 Jul 26 20:06 boinc_lockfile
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc      2563 Jul 26 20:38 pandaJob.out
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc    980125 Jul 26 20:38 agis_schedconf.cvmfs.json
[2025-07-27 01:41:05] drwx------. 4 boinc boinc      4096 Jul 26 20:39 pilot3
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc 216077930 Jul 27 01:20 HITS.45743349._029021.pool.root.1
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc       530 Jul 27 01:20 boinc_task_state.xml
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc      1016 Jul 27 01:21 memory_monitor_summary.json
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc   1593052 Jul 27 01:21 agis_ddmendpoints.agis.ALL.json
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc    412670 Jul 27 01:21 log.45743349._029021.job.log.tgz.1
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc      7787 Jul 27 01:22 heartbeat.json
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc        95 Jul 27 01:23 pilot_heartbeat.json
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc       820 Jul 27 01:23 pilotlog.txt
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc   1461782 Jul 27 01:23 log.45743349._029021.job.log.1
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc       357 Jul 27 01:23 output.list
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc       620 Jul 27 01:23 runtime_log
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc   1894400 Jul 27 01:23 result.tar.gz
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc       657 Jul 27 01:23 YpILDm4Qhz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHnzKDm0mzQon.diag
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc      8660 Jul 27 01:23 runtime_log.err
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc      8192 Jul 27 01:41 boinc_mmap_file
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc        28 Jul 27 01:41 wrapper_checkpoint.txt
[2025-07-27 01:41:05] -rw-r--r--. 1 boinc boinc     20736 Jul 27 01:41 stderr.txt
[2025-07-27 01:41:05] HITS file was successfully produced:
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc 216077930 Jul 27 01:20 shared/HITS.pool.root.1
[2025-07-27 01:41:05]  *** Contents of shared directory: ***
[2025-07-27 01:41:05] total 353060
[2025-07-27 01:41:05] -rw-r--r--. 2 boinc boinc 142995030 Jul 26 20:06 ATLAS.root_0
[2025-07-27 01:41:05] -rw-r--r--. 2 boinc boinc    542888 Jul 26 20:06 input.tar.gz
[2025-07-27 01:41:05] -rw-r--r--. 2 boinc boinc     15095 Jul 26 20:06 start_atlas.sh
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc 216077930 Jul 27 01:20 HITS.pool.root.1
[2025-07-27 01:41:05] -rw-------. 1 boinc boinc   1894400 Jul 27 01:23 result.tar.gz
01:41:07 (18453): run_atlas exited; CPU time 65005.433285
01:41:07 (18453): called boinc_finish(0)

</stderr_txt>
]]>

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