Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:49:36 (14542): wrapper (7.7.26015): starting
01:49:36 (14542): wrapper: running run_atlas (--nthreads 8)
[2025-07-26 01:49:36] Arguments: --nthreads 8
[2025-07-26 01:49:36] Threads: 8
[2025-07-26 01:49:36] Checking for CVMFS
[2025-07-26 01:49:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 01:49:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 01:49:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 01:49:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 01:49:37] 2.11.2.0 2885 93065 75252 148765 2 57 10186305 20275201 1 130560 0 24062728 99.958 6911430 7885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 01:49:37] CVMFS is ok
[2025-07-26 01:49:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 01:49:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 01:49:37] Further information can be found at the LHC@home message board.
[2025-07-26 01:49:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 01:49:37] Checking for apptainer binary...
[2025-07-26 01:49:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 01:49:37] Running /usr/bin/apptainer --version
[2025-07-26 01:49:37] apptainer version 1.3.2-1.el7
[2025-07-26 01:49:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 01:49:38] c-204-6.aglt2.org
[2025-07-26 01:49:38] apptainer works
[2025-07-26 01:49:39] Set ATHENA_PROC_NUMBER=8
[2025-07-26 01:49:39] Set ATHENA_CORE_NUMBER=8
[2025-07-26 01:49:39] Starting ATLAS job with PandaID=6745066323
[2025-07-26 01:49:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 04:14:29]  *** The last 200 lines of the pilot log: ***
[2025-07-26 04:14:29] 2025-07-26 08:13:56,424 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 04:14:29] 2025-07-26 08:13:56,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 04:14:29] 2025-07-26 08:13:56,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 04:14:29] 2025-07-26 08:13:56,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 04:14:29] 2025-07-26 08:13:56,430 | INFO     | fitting pss+swap vs Time
[2025-07-26 04:14:29] 2025-07-26 08:13:56,430 | INFO     | sum of square deviations: 869188390.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,432 | INFO     | sum of deviations: 10084650783.999996
[2025-07-26 04:14:29] 2025-07-26 08:13:56,432 | INFO     | mean x: 1753513299.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,432 | INFO     | mean y: 2500790.5390070924
[2025-07-26 04:14:29] 2025-07-26 08:13:56,432 | INFO     | -- intersect: -20342420366.90394
[2025-07-26 04:14:29] 2025-07-26 08:13:56,433 | INFO     | intersect: -20342420366.90394
[2025-07-26 04:14:29] 2025-07-26 08:13:56,433 | INFO     | chi2: 1.550360353539952
[2025-07-26 04:14:29] 2025-07-26 08:13:56,434 | INFO     | sum of square deviations: 779958810.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,434 | INFO     | sum of deviations: 9750874278.000002
[2025-07-26 04:14:29] 2025-07-26 08:13:56,435 | INFO     | mean x: 1753513146.5
[2025-07-26 04:14:29] 2025-07-26 08:13:56,435 | INFO     | mean y: 2500219.8529411764
[2025-07-26 04:14:29] 2025-07-26 08:13:56,435 | INFO     | -- intersect: -21919537222.53674
[2025-07-26 04:14:29] 2025-07-26 08:13:56,436 | INFO     | sufficient remaining disk space (18741198848 B)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,436 | INFO     | intersect: -21919537222.53674
[2025-07-26 04:14:29] 2025-07-26 08:13:56,436 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,437 | INFO     | chi2: 1.5523412794008369
[2025-07-26 04:14:29] 2025-07-26 08:13:56,437 | INFO     | current chi2=1.5523412794008369 (change=-0.12777196323176576 %)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,437 | INFO     | right removable region: 135
[2025-07-26 04:14:29] 2025-07-26 08:13:56,438 | INFO     | sum of square deviations: 779958810.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,439 | INFO     | sum of deviations: -10902301555.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,439 | INFO     | mean x: 1753513451.5
[2025-07-26 04:14:29] 2025-07-26 08:13:56,439 | INFO     | mean y: 2536054.4852941176
[2025-07-26 04:14:29] 2025-07-26 08:13:56,439 | INFO     | -- intersect: 24513230957.72239
[2025-07-26 04:14:29] 2025-07-26 08:13:56,440 | INFO     | intersect: 24513230957.72239
[2025-07-26 04:14:29] 2025-07-26 08:13:56,440 | INFO     | chi2: 0.08356901061812387
[2025-07-26 04:14:29] 2025-07-26 08:13:56,440 | INFO     | current chi2=0.08356901061812387 (change=94.60970409703073 %)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,441 | INFO     | sum of square deviations: 697054930.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,442 | INFO     | sum of deviations: -6954677344.000002
[2025-07-26 04:14:29] 2025-07-26 08:13:56,442 | INFO     | mean x: 1753513604.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,442 | INFO     | mean y: 2528772.9465648853
[2025-07-26 04:14:29] 2025-07-26 08:13:56,442 | INFO     | -- intersect: 17497737269.835884
[2025-07-26 04:14:29] 2025-07-26 08:13:56,443 | INFO     | intersect: 17497737269.835884
[2025-07-26 04:14:29] 2025-07-26 08:13:56,443 | INFO     | chi2: 0.06811927698001921
[2025-07-26 04:14:29] 2025-07-26 08:13:56,443 | INFO     | current chi2=0.06811927698001921 (change=18.48739565519521 %)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,444 | INFO     | left removable region: 20
[2025-07-26 04:14:29] 2025-07-26 08:13:56,444 | INFO     | sum of square deviations: 471562330.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,445 | INFO     | sum of deviations: 654802060.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,445 | INFO     | mean x: 1753513726.0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,445 | INFO     | mean y: 2512987.6173913046
[2025-07-26 04:14:29] 2025-07-26 08:13:56,445 | INFO     | -- intersect: -2432381250.060745
[2025-07-26 04:14:29] 2025-07-26 08:13:56,446 | INFO     | intersect: -2432381250.060745
[2025-07-26 04:14:29] 2025-07-26 08:13:56,446 | INFO     | chi2: 0.00011272825418512852
[2025-07-26 04:14:29] 2025-07-26 08:13:56,446 | INFO     | -- intersect: -2432381250.060745
[2025-07-26 04:14:29] 2025-07-26 08:13:56,447 | INFO     | current memory leak: 1.39 B/s (using 115 data points, chi2=0.00)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,447 | INFO     | could have reported an average CPU frequency of 1991 MHz (8 samples)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,447 | INFO     | ..............................
[2025-07-26 04:14:29] 2025-07-26 08:13:56,448 | INFO     | . Timing measurements:
[2025-07-26 04:14:29] 2025-07-26 08:13:56,448 | INFO     | . get job = 0 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,448 | INFO     | . initial setup = 2 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,448 | INFO     | . payload setup = 12 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,448 | INFO     | . stage-in = 0 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,449 | INFO     | . payload execution = 8600 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,449 | INFO     | . stage-out = 0 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,449 | INFO     | . log creation = 0 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,449 | INFO     | ..............................
[2025-07-26 04:14:29] 2025-07-26 08:13:56,552 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6745066323: 3144034 B (within 2537553920 B limit)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,553 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6745066323/HITS.45743349._028993.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,553 | INFO     | total size of present files: 0 B (workdir size: 3144034 B)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,553 | INFO     | 
[2025-07-26 04:14:29] 2025-07-26 08:13:56,553 | INFO     | job summary report
[2025-07-26 04:14:29] 2025-07-26 08:13:56,554 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6745066323/HITS.45743349._028993.pool.root.1 since it does not exist
[2025-07-26 04:14:29] 2025-07-26 08:13:56,554 | INFO     | --------------------------------------------------
[2025-07-26 04:14:29] 2025-07-26 08:13:56,555 | INFO     | PanDA job id: 6745066323
[2025-07-26 04:14:29] 2025-07-26 08:13:56,555 | INFO     | task id: 45743349
[2025-07-26 04:14:29] 2025-07-26 08:13:56,555 | INFO     | errors: (none)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 04:14:29] 2025-07-26 08:13:56,555 | INFO     | pilot state: finished 
[2025-07-26 04:14:29] 2025-07-26 08:13:56,556 | INFO     | transexitcode: 0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,556 | INFO     | exeerrorcode: 0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,556 | INFO     | exeerrordiag: 
[2025-07-26 04:14:29] 2025-07-26 08:13:56,556 | INFO     | exitcode: 0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,556 | INFO     | exitmsg: OK
[2025-07-26 04:14:29] 2025-07-26 08:13:56,557 | INFO     | cpuconsumptiontime: 65078 s
[2025-07-26 04:14:29] 2025-07-26 08:13:56,557 | INFO     | nevents: 400
[2025-07-26 04:14:29] 2025-07-26 08:13:56,557 | INFO     | neventsw: 0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,557 | INFO     | pid: 25553
[2025-07-26 04:14:29] 2025-07-26 08:13:56,557 | INFO     | pgrp: 25553
[2025-07-26 04:14:29] 2025-07-26 08:13:56,557 | INFO     | corecount: 8
[2025-07-26 04:14:29] 2025-07-26 08:13:56,558 | INFO     | event service: False
[2025-07-26 04:14:29] 2025-07-26 08:13:56,558 | INFO     | sizes: {0: 2397468, 1: 2397468, 6: 2397758, 11: 2397786, 8616: 2425693, 8617: 2434691, 8619: 2434875, 8625: 2435069}
[2025-07-26 04:14:29] 2025-07-26 08:13:56,558 | INFO     | --------------------------------------------------
[2025-07-26 04:14:29] 2025-07-26 08:13:56,558 | INFO     | 
[2025-07-26 04:14:29] 2025-07-26 08:13:56,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 04:14:29] 2025-07-26 08:13:56,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 04:14:29] 2025-07-26 08:13:56,590 | INFO     | job 6745066323 has completed (purged errors)
[2025-07-26 04:14:29] 2025-07-26 08:13:56,590 | INFO     | overall cleanup function is called
[2025-07-26 04:14:29] 2025-07-26 08:13:56,663 | INFO     | number of running child processes to parent process 25553: 1
[2025-07-26 04:14:29] 2025-07-26 08:13:56,663 | INFO     | maximum number of monitored processes: 6
[2025-07-26 04:14:29] 2025-07-26 08:13:56,663 | INFO     | aborting job monitoring since job object (job id=6745066323) has expired
[2025-07-26 04:14:29] 2025-07-26 08:13:57,600 | INFO     | --- collectZombieJob: --- 10, [25553]
[2025-07-26 04:14:29] 2025-07-26 08:13:57,600 | INFO     | zombie collector waiting for pid 25553
[2025-07-26 04:14:29] 2025-07-26 08:13:57,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 04:14:29] 2025-07-26 08:13:57,601 | INFO     | collected zombie processes
[2025-07-26 04:14:29] 2025-07-26 08:13:57,601 | INFO     | will attempt to kill all subprocesses of pid=25553
[2025-07-26 04:14:29] 2025-07-26 08:13:57,687 | INFO     | process IDs to be killed: [25553] (in reverse order)
[2025-07-26 04:14:29] 2025-07-26 08:13:57,742 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 04:14:29] 2025-07-26 08:13:57,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 04:14:29] 2025-07-26 08:13:57,745 | INFO     | did not find any defunct processes belonging to 25553
[2025-07-26 04:14:29] 2025-07-26 08:13:57,748 | INFO     | did not find any defunct processes belonging to 25553
[2025-07-26 04:14:29] 2025-07-26 08:13:57,748 | INFO     | ready for new job
[2025-07-26 04:14:29] 2025-07-26 08:13:57,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 04:14:29] 2025-07-26 08:13:57,750 | INFO     | ***************************************
[2025-07-26 04:14:29] 2025-07-26 08:13:57,750 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 04:14:29] 2025-07-26 08:13:57,750 | INFO     | ***************************************
[2025-07-26 04:14:29] 2025-07-26 08:13:57,750 | INFO     | 
[2025-07-26 04:14:29] 2025-07-26 08:13:57,751 | INFO     | architecture information:
[2025-07-26 04:14:29] 2025-07-26 08:13:57,752 | INFO     | executing command: cat /etc/os-release
[2025-07-26 04:14:29] 2025-07-26 08:13:57,768 | INFO     | cat /etc/os-release:
[2025-07-26 04:14:29] NAME="CentOS Linux"
[2025-07-26 04:14:29] VERSION="7 (Core)"
[2025-07-26 04:14:29] ID="centos"
[2025-07-26 04:14:29] ID_LIKE="rhel fedora"
[2025-07-26 04:14:29] VERSION_ID="7"
[2025-07-26 04:14:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 04:14:29] ANSI_COLOR="0;31"
[2025-07-26 04:14:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 04:14:29] HOME_URL="https://www.centos.org/"
[2025-07-26 04:14:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 04:14:29] 
[2025-07-26 04:14:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 04:14:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 04:14:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 04:14:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 04:14:29] 
[2025-07-26 04:14:29] 2025-07-26 08:13:57,769 | INFO     | ***************************************
[2025-07-26 04:14:29] 2025-07-26 08:13:58,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 04:14:29] 2025-07-26 08:13:58,290 | INFO     | sufficient remaining disk space (18744344576 B)
[2025-07-26 04:14:29] 2025-07-26 08:13:58,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 04:14:29] 2025-07-26 08:13:58,291 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 04:14:29] 2025-07-26 08:13:58,291 | INFO     | update_server=False
[2025-07-26 04:14:29] 2025-07-26 08:13:58,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 04:14:29] 2025-07-26 08:13:58,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 04:14:29] 2025-07-26 08:13:58,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 04:14:29] 2025-07-26 08:13:58,293 | INFO     | aborting loop
[2025-07-26 04:14:29] 2025-07-26 08:13:59,049 | INFO     | all payload control threads have been joined
[2025-07-26 04:14:29] 2025-07-26 08:13:59,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 04:14:29] 2025-07-26 08:13:59,294 | INFO     | [job] job monitor thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:13:59,297 | INFO     | [job] retrieve thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:13:59,298 | INFO     | [job] queue monitor thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:13:59,335 | INFO     | all job control threads have been joined
[2025-07-26 04:14:29] 2025-07-26 08:13:59,375 | INFO     | all data control threads have been joined
[2025-07-26 04:14:29] 2025-07-26 08:13:59,760 | INFO     | [job] validate thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:13:59,792 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:13:59,907 | INFO     | [payload] validate_post thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,055 | INFO     | [payload] control thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,237 | INFO     | [data] copytool_in thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,340 | INFO     | [job] control thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,377 | INFO     | [data] control thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,542 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,602 | INFO     | [payload] failed_post thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,618 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:00,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:01,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 04:14:29] 2025-07-26 08:14:01,185 | INFO     | [data] copytool_out thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:05,046 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 04:14:29] 2025-07-26 08:14:06,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902289323840)>', '<ExcThread(monitor, started 139901035079424)>']
[2025-07-26 04:14:29] 2025-07-26 08:14:11,682 | INFO     | all workflow threads have been joined
[2025-07-26 04:14:29] 2025-07-26 08:14:11,682 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 04:14:29] 2025-07-26 08:14:11,689 | INFO     | traces error code: 0
[2025-07-26 04:14:29] 2025-07-26 08:14:11,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 04:14:29] 2025-07-26 08:14:28,874 | INFO     | PID=18206 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-26 04:14:29] 2025-07-26 08:14:28,875 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 04:14:29] 2025-07-26 08:14:28,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 04:14:29] 2025-07-26 08:14:28,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 04:14:29] 2025-07-26 08:14:28,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 04:14:29] 2025-07-26 08:14:28,875 | INFO     | [monitor] control thread has ended
[2025-07-26 04:14:29] 2025-07-26 08:14:28,980 [wrapper] ==== pilot stdout END ====
[2025-07-26 04:14:29] 2025-07-26 08:14:28,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 04:14:29] 2025-07-26 08:14:28,990 [wrapper] pilotpid: 18206
[2025-07-26 04:14:29] 2025-07-26 08:14:28,994 [wrapper] Pilot exit status: 0
[2025-07-26 04:14:29] 2025-07-26 08:14:29,012 [wrapper] pandaids: 6745066323
[2025-07-26 04:14:29] 2025-07-26 08:14:29,057 [wrapper] cleanup supervisor_pilot  9652 18207
[2025-07-26 04:14:29] 2025-07-26 08:14:29,062 [wrapper] Test setup, not cleaning
[2025-07-26 04:14:29] 2025-07-26 08:14:29,067 [wrapper] apfmon messages muted
[2025-07-26 04:14:29] 2025-07-26 08:14:29,072 [wrapper] ==== wrapper stdout END ====
[2025-07-26 04:14:29] 2025-07-26 08:14:29,077 [wrapper] ==== wrapper stderr END ====
[2025-07-26 04:14:29]  *** Error codes and diagnostics ***
[2025-07-26 04:14:29]     "exeErrorCode": 0,
[2025-07-26 04:14:29]     "exeErrorDiag": "",
[2025-07-26 04:14:29]     "pilotErrorCode": 0,
[2025-07-26 04:14:29]     "pilotErrorDiag": "",
[2025-07-26 04:14:29]  *** Listing of results directory ***
[2025-07-26 04:14:29] total 348396
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 19:49 queuedata.json
[2025-07-26 04:14:29] -rwx------ 1 boincer umatlas     36292 Jul 25 19:50 runpilot2-wrapper.sh
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 19:50 pilot3.tar.gz
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas       100 Jul 26 01:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 04:14:29] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 01:49 run_atlas
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas       105 Jul 26 01:49 job.xml
[2025-07-26 04:14:29] -rw-r--r-- 2 boincer umatlas 142252911 Jul 26 01:49 EVNT.45743347._001625.pool.root.1
[2025-07-26 04:14:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 01:49 start_atlas.sh
[2025-07-26 04:14:29] drwxrwx--x 2 boincer umatlas      4096 Jul 26 01:49 shared
[2025-07-26 04:14:29] -rw-r--r-- 2 boincer umatlas    542880 Jul 26 01:49 input.tar.gz
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas         0 Jul 26 01:49 boinc_lockfile
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas      2559 Jul 26 01:49 pandaJob.out
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas    980001 Jul 26 01:49 agis_schedconf.cvmfs.json
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas   1593052 Jul 26 01:49 agis_ddmendpoints.agis.ALL.json
[2025-07-26 04:14:29] drwx------ 4 boincer umatlas      4096 Jul 26 01:49 pilot3
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas 208413742 Jul 26 04:13 HITS.45743349._028993.pool.root.1
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas      5824 Jul 26 04:13 init_data.xml
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas       529 Jul 26 04:13 boinc_task_state.xml
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas      1049 Jul 26 04:13 memory_monitor_summary.json
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas    326861 Jul 26 04:13 log.45743349._028993.job.log.tgz.1
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas      7839 Jul 26 04:13 heartbeat.json
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 04:14 boinc_mmap_file
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas        27 Jul 26 04:14 wrapper_checkpoint.txt
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas       745 Jul 26 04:14 pilotlog.txt
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas        95 Jul 26 04:14 pilot_heartbeat.json
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas    783279 Jul 26 04:14 log.45743349._028993.job.log.1
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas       357 Jul 26 04:14 output.list
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas       620 Jul 26 04:14 runtime_log
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas   1126400 Jul 26 04:14 result.tar.gz
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas      8655 Jul 26 04:14 runtime_log.err
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas       659 Jul 26 04:14 DAjMDm0Lhz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnkQLDmqD9pCo.diag
[2025-07-26 04:14:29] -rw-r--r-- 1 boincer umatlas     21336 Jul 26 04:14 stderr.txt
[2025-07-26 04:14:29] HITS file was successfully produced:
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas 208413742 Jul 26 04:13 shared/HITS.pool.root.1
[2025-07-26 04:14:29]  *** Contents of shared directory: ***
[2025-07-26 04:14:29] total 344104
[2025-07-26 04:14:29] -rw-r--r-- 2 boincer umatlas 142252911 Jul 26 01:49 ATLAS.root_0
[2025-07-26 04:14:29] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 01:49 start_atlas.sh
[2025-07-26 04:14:29] -rw-r--r-- 2 boincer umatlas    542880 Jul 26 01:49 input.tar.gz
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas 208413742 Jul 26 04:13 HITS.pool.root.1
[2025-07-26 04:14:29] -rw------- 1 boincer umatlas   1126400 Jul 26 04:14 result.tar.gz
04:14:30 (14542): run_atlas exited; CPU time 65033.832131
04:14:30 (14542): called boinc_finish(0)

</stderr_txt>
]]>

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