Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:36:35 (461363): wrapper (7.7.26015): starting
01:36:35 (461363): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 01:36:35] Arguments: --nthreads 10
[2025-07-26 01:36:35] Threads: 10
[2025-07-26 01:36:35] Checking for CVMFS
[2025-07-26 01:36:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 01:36:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 01:36:36] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 01:36:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 01:36:37] 2.13.0.0 1448902 16529 297060 148765 3 258 21078153 21551105 15730 16776704 0 41025858 99.413 86688341 31722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 01:36:37] CVMFS is ok
[2025-07-26 01:36:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 01:36:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 01:36:37] Further information can be found at the LHC@home message board.
[2025-07-26 01:36:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 01:36:37] Checking for apptainer binary...
[2025-07-26 01:36:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 01:36:37] Running /usr/bin/apptainer --version
[2025-07-26 01:36:37] apptainer version 1.4.1-1.el9
[2025-07-26 01:36:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 01:36:37] c-16-30.aglt2.org
[2025-07-26 01:36:37] apptainer works
[2025-07-26 01:36:37] Set ATHENA_PROC_NUMBER=10
[2025-07-26 01:36:37] Set ATHENA_CORE_NUMBER=10
[2025-07-26 01:36:37] Starting ATLAS job with PandaID=6745065816
[2025-07-26 01:36:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:46:41 (1277342): wrapper (7.7.26015): starting
06:46:41 (1277342): wrapper: running run_atlas (--nthreads 10)
[2025-07-26 06:46:41] Arguments: --nthreads 10
[2025-07-26 06:46:41] Threads: 10
[2025-07-26 06:46:41] This job has been restarted, cleaning up previous attempt
[2025-07-26 06:46:41] Checking for CVMFS
[2025-07-26 06:46:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 06:46:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 06:46:42] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 06:46:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 06:46:43] 2.13.0.0 1448902 16839 305584 148774 0 17 21376695 21551105 14727 16776704 1 41335622 99.416 86730874 31711 http://cvmfs-s1.hpc.swin.edu.au:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-26 06:46:43] CVMFS is ok
[2025-07-26 06:46:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 06:46:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 06:46:43] Further information can be found at the LHC@home message board.
[2025-07-26 06:46:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 06:46:43] Checking for apptainer binary...
[2025-07-26 06:46:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 06:46:43] Running /usr/bin/apptainer --version
[2025-07-26 06:46:43] apptainer version 1.4.1-1.el9
[2025-07-26 06:46:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 06:46:44] c-16-30.aglt2.org
[2025-07-26 06:46:44] apptainer works
[2025-07-26 06:46:44] Set ATHENA_PROC_NUMBER=10
[2025-07-26 06:46:44] Set ATHENA_CORE_NUMBER=10
[2025-07-26 06:46:44] Starting ATLAS job with PandaID=6745065816
[2025-07-26 06:46:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 11:53:56]  *** The last 200 lines of the pilot log: ***
[2025-07-26 11:53:56] 2025-07-26 15:53:23,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 11:53:56] 2025-07-26 15:53:23,354 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 11:53:56] 2025-07-26 15:53:23,354 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 11:53:56] 2025-07-26 15:53:23,358 | INFO     | fitting pss+swap vs Time
[2025-07-26 11:53:56] 2025-07-26 15:53:23,358 | INFO     | sum of square deviations: 8371721688.9200325
[2025-07-26 11:53:56] 2025-07-26 15:53:23,360 | INFO     | sum of deviations: 44284448989.08002
[2025-07-26 11:53:56] 2025-07-26 15:53:23,360 | INFO     | mean x: 1753536071.94
[2025-07-26 11:53:56] 2025-07-26 15:53:23,361 | INFO     | mean y: 2198102.7266666666
[2025-07-26 11:53:56] 2025-07-26 15:53:23,361 | INFO     | -- intersect: -9273597440.15601
[2025-07-26 11:53:56] 2025-07-26 15:53:23,361 | INFO     | intersect: -9273597440.15601
[2025-07-26 11:53:56] 2025-07-26 15:53:23,361 | INFO     | chi2: 2.6579950816596063
[2025-07-26 11:53:56] 2025-07-26 15:53:23,362 | INFO     | sum of square deviations: 7960089112.935596
[2025-07-26 11:53:56] 2025-07-26 15:53:23,363 | INFO     | sum of deviations: 63706534482.11528
[2025-07-26 11:53:56] 2025-07-26 15:53:23,364 | INFO     | mean x: 1753535919.4474576
[2025-07-26 11:53:56] 2025-07-26 15:53:23,364 | INFO     | mean y: 2205209.620338983
[2025-07-26 11:53:56] 2025-07-26 15:53:23,364 | INFO     | -- intersect: -14031770407.10603
[2025-07-26 11:53:56] 2025-07-26 15:53:23,364 | INFO     | intersect: -14031770407.10603
[2025-07-26 11:53:56] 2025-07-26 15:53:23,364 | INFO     | chi2: 1.9747590389952152
[2025-07-26 11:53:56] 2025-07-26 15:53:23,364 | INFO     | current chi2=1.9747590389952152 (change=25.704940064741965 %)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,365 | INFO     | sum of square deviations: 7562141612.224155
[2025-07-26 11:53:56] 2025-07-26 15:53:23,366 | INFO     | sum of deviations: 61659235677.01725
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | mean x: 1753535766.9482758
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | mean y: 2204422.334482759
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | -- intersect: -14295554158.060905
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | intersect: -14295554158.060905
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | chi2: 1.9735728702719055
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | current chi2=1.9735728702719055 (change=0.060066504312000335 %)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,367 | INFO     | right removable region: 289
[2025-07-26 11:53:56] 2025-07-26 15:53:23,368 | INFO     | sum of square deviations: 7960008592.9355955
[2025-07-26 11:53:56] 2025-07-26 15:53:23,369 | INFO     | sum of deviations: -5386670656.644066
[2025-07-26 11:53:56] 2025-07-26 15:53:23,370 | INFO     | mean x: 1753536224.4474576
[2025-07-26 11:53:56] 2025-07-26 15:53:23,370 | INFO     | mean y: 2216411.474576271
[2025-07-26 11:53:56] 2025-07-26 15:53:23,370 | INFO     | -- intersect: 1188863638.7120566
[2025-07-26 11:53:56] 2025-07-26 15:53:23,370 | INFO     | intersect: 1188863638.7120566
[2025-07-26 11:53:56] 2025-07-26 15:53:23,370 | INFO     | chi2: 1.0255950314568245
[2025-07-26 11:53:56] 2025-07-26 15:53:23,370 | INFO     | current chi2=1.0255950314568245 (change=61.414712971686136 %)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,371 | INFO     | sum of square deviations: 7562016684.417228
[2025-07-26 11:53:56] 2025-07-26 15:53:23,372 | INFO     | sum of deviations: -11386438178.855179
[2025-07-26 11:53:56] 2025-07-26 15:53:23,372 | INFO     | mean x: 1753536376.9551723
[2025-07-26 11:53:56] 2025-07-26 15:53:23,373 | INFO     | mean y: 2218681.703448276
[2025-07-26 11:53:56] 2025-07-26 15:53:23,373 | INFO     | -- intersect: 2642590210.070751
[2025-07-26 11:53:56] 2025-07-26 15:53:23,373 | INFO     | intersect: 2642590210.070751
[2025-07-26 11:53:56] 2025-07-26 15:53:23,373 | INFO     | chi2: 0.9724765265769983
[2025-07-26 11:53:56] 2025-07-26 15:53:23,373 | INFO     | current chi2=0.9724765265769983 (change=5.179286487413366 %)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,373 | INFO     | left removable region: 20
[2025-07-26 11:53:56] 2025-07-26 15:53:23,374 | INFO     | sum of square deviations: 6035300108.758385
[2025-07-26 11:53:56] 2025-07-26 15:53:23,375 | INFO     | sum of deviations: 23079687086.780678
[2025-07-26 11:53:56] 2025-07-26 15:53:23,375 | INFO     | mean x: 1753536346.4572492
[2025-07-26 11:53:56] 2025-07-26 15:53:23,375 | INFO     | mean y: 2219521.6765799257
[2025-07-26 11:53:56] 2025-07-26 15:53:23,375 | INFO     | -- intersect: -6703506696.11309
[2025-07-26 11:53:56] 2025-07-26 15:53:23,376 | INFO     | intersect: -6703506696.11309
[2025-07-26 11:53:56] 2025-07-26 15:53:23,376 | INFO     | chi2: 0.138805422883713
[2025-07-26 11:53:56] 2025-07-26 15:53:23,376 | INFO     | -- intersect: -6703506696.11309
[2025-07-26 11:53:56] 2025-07-26 15:53:23,376 | INFO     | current memory leak: 3.82 B/s (using 269 data points, chi2=0.14)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | could have reported an average CPU frequency of 2903 MHz (13 samples)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | ..............................
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . Timing measurements:
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . get job = 0 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . initial setup = 4 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . payload setup = 29 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . stage-in = 0 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . payload execution = 18263 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . stage-out = 3 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | . log creation = 0 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,377 | INFO     | ..............................
[2025-07-26 11:53:56] 2025-07-26 15:53:23,510 | INFO     | 
[2025-07-26 11:53:56] 2025-07-26 15:53:23,510 | INFO     | job summary report
[2025-07-26 11:53:56] 2025-07-26 15:53:23,510 | INFO     | --------------------------------------------------
[2025-07-26 11:53:56] 2025-07-26 15:53:23,510 | INFO     | PanDA job id: 6745065816
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | task id: 45743349
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | errors: (none)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | pilot state: finished 
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | transexitcode: 0
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | exeerrorcode: 0
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | exeerrordiag: 
[2025-07-26 11:53:56] 2025-07-26 15:53:23,511 | INFO     | exitcode: 0
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | exitmsg: OK
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | cpuconsumptiontime: 84761 s
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | nevents: 400
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | neventsw: 0
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | pid: 1291189
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | pgrp: 1291189
[2025-07-26 11:53:56] 2025-07-26 15:53:23,512 | INFO     | corecount: 10
[2025-07-26 11:53:56] 2025-07-26 15:53:23,513 | INFO     | event service: False
[2025-07-26 11:53:56] 2025-07-26 15:53:23,513 | INFO     | sizes: {0: 2396596, 1: 2397292, 2: 2397320, 3: 2397519, 14: 2397519, 24: 2397809, 25: 2397965, 18294: 2430146, 18298: 2439166, 18300: 2439222, 18305: 2439416}
[2025-07-26 11:53:56] 2025-07-26 15:53:23,513 | INFO     | --------------------------------------------------
[2025-07-26 11:53:56] 2025-07-26 15:53:23,513 | INFO     | 
[2025-07-26 11:53:56] 2025-07-26 15:53:23,513 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-07-26 11:53:56] 2025-07-26 15:53:23,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,536 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,536 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,536 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 11:53:56] 2025-07-26 15:53:23,536 | INFO     | job 6745065816 has completed (purged errors)
[2025-07-26 11:53:56] 2025-07-26 15:53:23,537 | INFO     | overall cleanup function is called
[2025-07-26 11:53:56] 2025-07-26 15:53:24,546 | INFO     | --- collectZombieJob: --- 10, [1291189]
[2025-07-26 11:53:56] 2025-07-26 15:53:24,546 | INFO     | zombie collector waiting for pid 1291189
[2025-07-26 11:53:56] 2025-07-26 15:53:24,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 11:53:56] 2025-07-26 15:53:24,547 | INFO     | collected zombie processes
[2025-07-26 11:53:56] 2025-07-26 15:53:24,547 | INFO     | will attempt to kill all subprocesses of pid=1291189
[2025-07-26 11:53:56] 2025-07-26 15:53:25,002 | INFO     | process IDs to be killed: [1291189] (in reverse order)
[2025-07-26 11:53:56] 2025-07-26 15:53:25,139 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 11:53:56] 2025-07-26 15:53:25,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 11:53:56] 2025-07-26 15:53:25,162 | INFO     | did not find any defunct processes belonging to 1291189
[2025-07-26 11:53:56] 2025-07-26 15:53:25,185 | INFO     | did not find any defunct processes belonging to 1291189
[2025-07-26 11:53:56] 2025-07-26 15:53:25,185 | INFO     | ready for new job
[2025-07-26 11:53:56] 2025-07-26 15:53:25,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 11:53:56] 2025-07-26 15:53:25,188 | INFO     | ***************************************
[2025-07-26 11:53:56] 2025-07-26 15:53:25,188 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 11:53:56] 2025-07-26 15:53:25,188 | INFO     | ***************************************
[2025-07-26 11:53:56] 2025-07-26 15:53:25,188 | INFO     | 
[2025-07-26 11:53:56] 2025-07-26 15:53:25,203 | INFO     | architecture information:
[2025-07-26 11:53:56] 2025-07-26 15:53:25,204 | INFO     | executing command: cat /etc/os-release
[2025-07-26 11:53:56] 2025-07-26 15:53:25,220 | INFO     | cat /etc/os-release:
[2025-07-26 11:53:56] NAME="CentOS Linux"
[2025-07-26 11:53:56] VERSION="7 (Core)"
[2025-07-26 11:53:56] ID="centos"
[2025-07-26 11:53:56] ID_LIKE="rhel fedora"
[2025-07-26 11:53:56] VERSION_ID="7"
[2025-07-26 11:53:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 11:53:56] ANSI_COLOR="0;31"
[2025-07-26 11:53:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 11:53:56] HOME_URL="https://www.centos.org/"
[2025-07-26 11:53:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 11:53:56] 
[2025-07-26 11:53:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 11:53:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 11:53:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 11:53:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 11:53:56] 
[2025-07-26 11:53:56] 2025-07-26 15:53:25,221 | INFO     | ***************************************
[2025-07-26 11:53:56] 2025-07-26 15:53:25,723 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-07-26 11:53:56] 2025-07-26 15:53:25,736 | INFO     | sufficient remaining disk space (1843255050240 B)
[2025-07-26 11:53:56] 2025-07-26 15:53:25,736 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 11:53:56] 2025-07-26 15:53:25,736 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 11:53:56] 2025-07-26 15:53:25,737 | INFO     | update_server=False
[2025-07-26 11:53:56] 2025-07-26 15:53:25,737 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 11:53:56] 2025-07-26 15:53:25,936 | INFO     | all data control threads have been joined
[2025-07-26 11:53:56] 2025-07-26 15:53:26,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:53:56] 2025-07-26 15:53:26,156 | INFO     | aborting loop
[2025-07-26 11:53:56] 2025-07-26 15:53:26,243 | INFO     | all payload control threads have been joined
[2025-07-26 11:53:56] 2025-07-26 15:53:26,741 | INFO     | [job] retrieve thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:26,897 | INFO     | [payload] failed_post thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:26,941 | INFO     | [data] control thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:26,971 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:26,981 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:27,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 11:53:56] 2025-07-26 15:53:27,149 | INFO     | all job control threads have been joined
[2025-07-26 11:53:56] 2025-07-26 15:53:27,160 | INFO     | [job] job monitor thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:27,248 | INFO     | [payload] control thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:27,429 | INFO     | [data] copytool_in thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:27,785 | INFO     | [job] validate thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:27,906 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:28,018 | INFO     | [payload] validate_post thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:28,154 | INFO     | [job] control thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:28,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 11:53:56] 2025-07-26 15:53:28,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 11:53:56] 2025-07-26 15:53:29,022 | INFO     | [data] copytool_out thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:29,524 | INFO     | [job] queue monitor thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:32,399 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:36,080 | INFO     | job.realtimelogging is not enabled
[2025-07-26 11:53:56] 2025-07-26 15:53:37,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 11:53:56] 2025-07-26 15:53:38,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573451130688)>', '<ExcThread(monitor, started 140573088388864)>']
[2025-07-26 11:53:56] 2025-07-26 15:53:43,312 | INFO     | all workflow threads have been joined
[2025-07-26 11:53:56] 2025-07-26 15:53:43,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 11:53:56] 2025-07-26 15:53:43,313 | INFO     | traces error code: 0
[2025-07-26 11:53:56] 2025-07-26 15:53:43,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 11:53:56] 2025-07-26 15:53:56,554 | INFO     | PID=1283070 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 11:53:56] 2025-07-26 15:53:56,554 | INFO     | .. there are 23 such processes running
[2025-07-26 11:53:56] 2025-07-26 15:53:56,555 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 11:53:56] 2025-07-26 15:53:56,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 11:53:56] 2025-07-26 15:53:56,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 11:53:56] 2025-07-26 15:53:56,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 11:53:56] 2025-07-26 15:53:56,555 | INFO     | [monitor] control thread has ended
[2025-07-26 11:53:56] 2025-07-26 15:53:56,718 [wrapper] ==== pilot stdout END ====
[2025-07-26 11:53:56] 2025-07-26 15:53:56,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 11:53:56] 2025-07-26 15:53:56,726 [wrapper] pilotpid: 1283070
[2025-07-26 11:53:56] 2025-07-26 15:53:56,729 [wrapper] Pilot exit status: 0
[2025-07-26 11:53:56] 2025-07-26 15:53:56,742 [wrapper] pandaids: 6745065816 6745065816
[2025-07-26 11:53:56] 2025-07-26 15:53:56,820 [wrapper] cleanup supervisor_pilot 2335020 1283071
[2025-07-26 11:53:56] 2025-07-26 15:53:56,824 [wrapper] Test setup, not cleaning
[2025-07-26 11:53:56] 2025-07-26 15:53:56,828 [wrapper] apfmon messages muted
[2025-07-26 11:53:56] 2025-07-26 15:53:56,832 [wrapper] ==== wrapper stdout END ====
[2025-07-26 11:53:56] 2025-07-26 15:53:56,835 [wrapper] ==== wrapper stderr END ====
[2025-07-26 11:53:56]  *** Error codes and diagnostics ***
[2025-07-26 11:53:56]     "exeErrorCode": 0,
[2025-07-26 11:53:56]     "exeErrorDiag": "",
[2025-07-26 11:53:56]     "pilotErrorCode": 0,
[2025-07-26 11:53:56]     "pilotErrorDiag": "",
[2025-07-26 11:53:56]  *** Listing of results directory ***
[2025-07-26 11:53:56] total 486292
[2025-07-26 11:53:56] drwx------. 4 boincer umatlas      4096 Jun 17 06:04 pilot3
[2025-07-26 11:53:56] -rwx------. 1 boincer umatlas     36292 Jul 25 19:32 runpilot2-wrapper.sh
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas      5112 Jul 25 19:32 queuedata.json
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas    530466 Jul 25 19:32 pilot3.tar.gz
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas       100 Jul 26 01:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 11:53:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 26 01:36 run_atlas
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas       105 Jul 26 01:36 job.xml
[2025-07-26 11:53:56] -rw-r--r--. 3 boincer umatlas 143636262 Jul 26 01:36 EVNT.45743347._001609.pool.root.1
[2025-07-26 11:53:56] -rw-r--r--. 3 boincer umatlas 143636262 Jul 26 01:36 ATLAS.root_0
[2025-07-26 11:53:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 01:36 start_atlas.sh
[2025-07-26 11:53:56] drwxrwx--x. 2 boincer umatlas        68 Jul 26 01:36 shared
[2025-07-26 11:53:56] -rw-r--r--. 2 boincer umatlas    542883 Jul 26 01:36 input.tar.gz
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas         0 Jul 26 01:36 boinc_lockfile
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas      2562 Jul 26 06:46 pandaJob.out
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas    980133 Jul 26 06:47 agis_schedconf.cvmfs.json
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas      6549 Jul 26 11:46 init_data.xml
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas       532 Jul 26 11:52 boinc_task_state.xml
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas 203215874 Jul 26 11:52 HITS.45743349._028756.pool.root.1
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas      1038 Jul 26 11:53 memory_monitor_summary.json
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas   1593052 Jul 26 11:53 agis_ddmendpoints.agis.ALL.json
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas    437969 Jul 26 11:53 log.45743349._028756.job.log.tgz.1
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas        96 Jul 26 11:53 pilot_heartbeat.json
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas      7817 Jul 26 11:53 heartbeat.json
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas        29 Jul 26 11:53 wrapper_checkpoint.txt
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas      8192 Jul 26 11:53 boinc_mmap_file
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas       823 Jul 26 11:53 pilotlog.txt
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas   1362318 Jul 26 11:53 log.45743349._028756.job.log.1
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas       357 Jul 26 11:53 output.list
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas       620 Jul 26 11:53 runtime_log
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas   1822720 Jul 26 11:53 result.tar.gz
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas      8897 Jul 26 11:53 runtime_log.err
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas       782 Jul 26 11:53 qyrNDmW5gz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhiQLDmYCAkbn.diag
[2025-07-26 11:53:56] -rw-r--r--. 1 boincer umatlas     23228 Jul 26 11:53 stderr.txt
[2025-07-26 11:53:56] HITS file was successfully produced:
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas 203215874 Jul 26 11:52 shared/HITS.pool.root.1
[2025-07-26 11:53:56]  *** Contents of shared directory: ***
[2025-07-26 11:53:56] total 341060
[2025-07-26 11:53:56] -rw-r--r--. 3 boincer umatlas 143636262 Jul 26 01:36 ATLAS.root_0
[2025-07-26 11:53:56] -rw-r--r--. 2 boincer umatlas     15095 Jul 26 01:36 start_atlas.sh
[2025-07-26 11:53:56] -rw-r--r--. 2 boincer umatlas    542883 Jul 26 01:36 input.tar.gz
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas 203215874 Jul 26 11:52 HITS.pool.root.1
[2025-07-26 11:53:56] -rw-------. 1 boincer umatlas   1822720 Jul 26 11:53 result.tar.gz
11:53:58 (1277342): run_atlas exited; CPU time 85507.842448
11:53:58 (1277342): called boinc_finish(0)

</stderr_txt>
]]>

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