Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:31:51 (1306): wrapper (7.7.26015): starting
01:31:51 (1306): wrapper: running run_atlas (--nthreads 12)
[2025-07-26 01:31:51] Arguments: --nthreads 12
[2025-07-26 01:31:51] Threads: 12
[2025-07-26 01:31:51] Checking for CVMFS
[2025-07-26 01:31:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 01:31:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 01:31:51] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 01:31:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 01:31:51] 2.11.2.0 3035 110099 97728 148765 3 57 14695618 20275200 1 130560 0 36190807 99.970 10070199 11072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-26 01:31:51] CVMFS is ok
[2025-07-26 01:31:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 01:31:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 01:31:51] Further information can be found at the LHC@home message board.
[2025-07-26 01:31:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 01:31:51] Checking for apptainer binary...
[2025-07-26 01:31:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 01:31:51] Running /usr/bin/apptainer --version
[2025-07-26 01:31:51] apptainer version 1.3.2-1.el7
[2025-07-26 01:31:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 01:31:52] c-205-31.aglt2.org
[2025-07-26 01:31:52] apptainer works
[2025-07-26 01:31:52] Set ATHENA_PROC_NUMBER=12
[2025-07-26 01:31:52] Set ATHENA_CORE_NUMBER=12
[2025-07-26 01:31:52] Starting ATLAS job with PandaID=6745065791
[2025-07-26 01:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 02:54:36]  *** The last 200 lines of the pilot log: ***
[2025-07-26 02:54:36]  scope=mc23_13p6TeV
[2025-07-26 02:54:36]  status=None
[2025-07-26 02:54:36]  status_code=0
[2025-07-26 02:54:36]  storage_token=
[2025-07-26 02:54:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6745065791/log.45743349._028731.job.log.tgz.1
[2025-07-26 02:54:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/82/log.45743349._028731.job.log.tgz.1
[2025-07-26 02:54:36]  workdir=None
[2025-07-26 02:54:36] ]
[2025-07-26 02:54:36] 2025-07-26 06:53:53,903 | INFO     | transferring file log.45743349._028731.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6745065791/log.45743349._028731.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-26 02:54:36] 2025-07-26 06:53:53,903 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6745065791/log.45743349._028731.job.log.tgz.1 /tmp/boinchome/slots/0/log.45743349._028731.job
[2025-07-26 02:54:36] 2025-07-26 06:53:53,927 | INFO     | adding to output.list: log.45743349._028731.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/82/log.45743349._028731.job.log.tg
[2025-07-26 02:54:36] 2025-07-26 06:53:53,928 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-26 02:54:36] 2025-07-26 06:53:53,928 | INFO     | summary of transferred files:
[2025-07-26 02:54:36] 2025-07-26 06:53:53,928 | INFO     |  -- lfn=log.45743349._028731.job.log.tgz.1, status_code=0, status=transferred
[2025-07-26 02:54:36] 2025-07-26 06:53:53,929 | INFO     | stage-out finished correctly
[2025-07-26 02:54:36] 2025-07-26 06:53:55,399 | INFO     | monitor loop #366: job 0:6745065791 is in state 'finished'
[2025-07-26 02:54:36] 2025-07-26 06:53:55,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:54:36] 2025-07-26 06:53:55,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-26 02:54:36] 2025-07-26 06:53:57,902 | INFO     | monitor loop #367: job 0:6745065791 is in state 'finished'
[2025-07-26 02:54:36] 2025-07-26 06:53:57,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:54:36] 2025-07-26 06:53:58,108 | INFO     | job 6745065791 has state=finished
[2025-07-26 02:54:36] 2025-07-26 06:53:58,108 | INFO     | preparing for final server update for job 6745065791 in state='finished'
[2025-07-26 02:54:36] 2025-07-26 06:53:58,168 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-07-26 02:54:36] 2025-07-26 06:53:58,169 | INFO     | this job has now completed (state=finished)
[2025-07-26 02:54:36] 2025-07-26 06:53:58,169 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-26 02:54:36] 2025-07-26 06:53:58,169 | INFO     | log transfer has been attempted: DONE
[2025-07-26 02:54:36] 2025-07-26 06:53:58,169 | INFO     | job 6745065791 has finished - writing final server update
[2025-07-26 02:54:36] 2025-07-26 06:53:58,170 | INFO     | total number of processed events: 400 (read)
[2025-07-26 02:54:36] 2025-07-26 06:53:58,170 | INFO     | executing command: lscpu
[2025-07-26 02:54:36] 2025-07-26 06:53:58,197 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-26 02:54:36] 2025-07-26 06:54:00,416 | INFO     | monitor loop #368: job 0:6745065791 is in state 'finished'
[2025-07-26 02:54:36] 2025-07-26 06:54:00,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:54:36] 2025-07-26 06:54:02,917 | INFO     | monitor loop #369: job 0:6745065791 is in state 'finished'
[2025-07-26 02:54:36] 2025-07-26 06:54:02,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,158 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-26 02:54:36] 2025-07-26 06:54:03,162 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.5
[2025-07-26 02:54:36] 2025-07-26 06:54:03,165 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6745065791/memory_monitor_summary.json (trf name=prmon)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,165 | INFO     | extracted standard info from prmon json
[2025-07-26 02:54:36] 2025-07-26 06:54:03,166 | INFO     | extracted standard memory fields from prmon json
[2025-07-26 02:54:36] 2025-07-26 06:54:03,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-26 02:54:36] 2025-07-26 06:54:03,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-26 02:54:36] 2025-07-26 06:54:03,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-26 02:54:36] 2025-07-26 06:54:03,168 | INFO     | fitting pss+swap vs Time
[2025-07-26 02:54:36] 2025-07-26 06:54:03,168 | INFO     | sum of square deviations: 120605052.0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,169 | INFO     | sum of deviations: -9003867179.999998
[2025-07-26 02:54:36] 2025-07-26 06:54:03,169 | INFO     | mean x: 1753510458.0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,169 | INFO     | mean y: 2790291.02739726
[2025-07-26 02:54:36] 2025-07-26 06:54:03,169 | INFO     | -- intersect: 130912524176.57777
[2025-07-26 02:54:36] 2025-07-26 06:54:03,169 | INFO     | intersect: 130912524176.57777
[2025-07-26 02:54:36] 2025-07-26 06:54:03,169 | INFO     | chi2: 0.09115506478673155
[2025-07-26 02:54:36] 2025-07-26 06:54:03,170 | INFO     | -- intersect: 130912524176.57777
[2025-07-26 02:54:36] 2025-07-26 06:54:03,170 | INFO     | current memory leak: -74.66 B/s (using 73 data points, chi2=0.09)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,170 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,170 | INFO     | ..............................
[2025-07-26 02:54:36] 2025-07-26 06:54:03,170 | INFO     | . Timing measurements:
[2025-07-26 02:54:36] 2025-07-26 06:54:03,170 | INFO     | . get job = 0 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | . initial setup = 2 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | . payload setup = 9 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | . stage-in = 0 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | . payload execution = 4876 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | . stage-out = 0 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | . log creation = 0 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,171 | INFO     | ..............................
[2025-07-26 02:54:36] 2025-07-26 06:54:03,665 | INFO     | 
[2025-07-26 02:54:36] 2025-07-26 06:54:03,666 | INFO     | job summary report
[2025-07-26 02:54:36] 2025-07-26 06:54:03,666 | INFO     | --------------------------------------------------
[2025-07-26 02:54:36] 2025-07-26 06:54:03,666 | INFO     | PanDA job id: 6745065791
[2025-07-26 02:54:36] 2025-07-26 06:54:03,666 | INFO     | task id: 45743349
[2025-07-26 02:54:36] 2025-07-26 06:54:03,666 | INFO     | errors: (none)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,666 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 02:54:36] 2025-07-26 06:54:03,667 | INFO     | pilot state: finished 
[2025-07-26 02:54:36] 2025-07-26 06:54:03,667 | INFO     | transexitcode: 0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,667 | INFO     | exeerrorcode: 0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,667 | INFO     | exeerrordiag: 
[2025-07-26 02:54:36] 2025-07-26 06:54:03,667 | INFO     | exitcode: 0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,667 | INFO     | exitmsg: OK
[2025-07-26 02:54:36] 2025-07-26 06:54:03,668 | INFO     | cpuconsumptiontime: 53441 s
[2025-07-26 02:54:36] 2025-07-26 06:54:03,668 | INFO     | nevents: 400
[2025-07-26 02:54:36] 2025-07-26 06:54:03,668 | INFO     | neventsw: 0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,668 | INFO     | pid: 11543
[2025-07-26 02:54:36] 2025-07-26 06:54:03,668 | INFO     | pgrp: 11543
[2025-07-26 02:54:36] 2025-07-26 06:54:03,668 | INFO     | corecount: 12
[2025-07-26 02:54:36] 2025-07-26 06:54:03,669 | INFO     | event service: False
[2025-07-26 02:54:36] 2025-07-26 06:54:03,669 | INFO     | sizes: {0: 2396647, 1: 2397503, 6: 2397765, 12: 2397793, 4890: 2424039, 4892: 2433037, 4894: 2433221, 4901: 2433415}
[2025-07-26 02:54:36] 2025-07-26 06:54:03,669 | INFO     | --------------------------------------------------
[2025-07-26 02:54:36] 2025-07-26 06:54:03,669 | INFO     | 
[2025-07-26 02:54:36] 2025-07-26 06:54:03,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-26 02:54:36] 2025-07-26 06:54:03,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,695 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,695 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 02:54:36] 2025-07-26 06:54:03,698 | INFO     | job 6745065791 has completed (purged errors)
[2025-07-26 02:54:36] 2025-07-26 06:54:03,698 | INFO     | overall cleanup function is called
[2025-07-26 02:54:36] 2025-07-26 06:54:04,706 | INFO     | --- collectZombieJob: --- 10, [11543]
[2025-07-26 02:54:36] 2025-07-26 06:54:04,706 | INFO     | zombie collector waiting for pid 11543
[2025-07-26 02:54:36] 2025-07-26 06:54:04,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 02:54:36] 2025-07-26 06:54:04,707 | INFO     | collected zombie processes
[2025-07-26 02:54:36] 2025-07-26 06:54:04,707 | INFO     | will attempt to kill all subprocesses of pid=11543
[2025-07-26 02:54:36] 2025-07-26 06:54:04,798 | INFO     | process IDs to be killed: [11543] (in reverse order)
[2025-07-26 02:54:36] 2025-07-26 06:54:04,851 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 02:54:36] 2025-07-26 06:54:04,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 02:54:36] 2025-07-26 06:54:04,855 | INFO     | did not find any defunct processes belonging to 11543
[2025-07-26 02:54:36] 2025-07-26 06:54:04,857 | INFO     | did not find any defunct processes belonging to 11543
[2025-07-26 02:54:36] 2025-07-26 06:54:04,857 | INFO     | ready for new job
[2025-07-26 02:54:36] 2025-07-26 06:54:04,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 02:54:36] 2025-07-26 06:54:04,858 | INFO     | ***************************************
[2025-07-26 02:54:36] 2025-07-26 06:54:04,859 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 02:54:36] 2025-07-26 06:54:04,859 | INFO     | ***************************************
[2025-07-26 02:54:36] 2025-07-26 06:54:04,859 | INFO     | 
[2025-07-26 02:54:36] 2025-07-26 06:54:04,859 | INFO     | architecture information:
[2025-07-26 02:54:36] 2025-07-26 06:54:04,860 | INFO     | executing command: cat /etc/os-release
[2025-07-26 02:54:36] 2025-07-26 06:54:04,875 | INFO     | cat /etc/os-release:
[2025-07-26 02:54:36] NAME="CentOS Linux"
[2025-07-26 02:54:36] VERSION="7 (Core)"
[2025-07-26 02:54:36] ID="centos"
[2025-07-26 02:54:36] ID_LIKE="rhel fedora"
[2025-07-26 02:54:36] VERSION_ID="7"
[2025-07-26 02:54:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 02:54:36] ANSI_COLOR="0;31"
[2025-07-26 02:54:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 02:54:36] HOME_URL="https://www.centos.org/"
[2025-07-26 02:54:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 02:54:36] 
[2025-07-26 02:54:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 02:54:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 02:54:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 02:54:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 02:54:36] 
[2025-07-26 02:54:36] 2025-07-26 06:54:04,876 | INFO     | ***************************************
[2025-07-26 02:54:36] 2025-07-26 06:54:05,379 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-26 02:54:36] 2025-07-26 06:54:05,397 | INFO     | sufficient remaining disk space (29515317248 B)
[2025-07-26 02:54:36] 2025-07-26 06:54:05,397 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 02:54:36] 2025-07-26 06:54:05,397 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 02:54:36] 2025-07-26 06:54:05,397 | INFO     | update_server=False
[2025-07-26 02:54:36] 2025-07-26 06:54:05,397 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 02:54:36] 2025-07-26 06:54:05,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 02:54:36] 2025-07-26 06:54:05,419 | INFO     | all payload control threads have been joined
[2025-07-26 02:54:36] 2025-07-26 06:54:05,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 02:54:36] 2025-07-26 06:54:05,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 02:54:36] 2025-07-26 06:54:05,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:54:36] 2025-07-26 06:54:05,432 | INFO     | will abort loop
[2025-07-26 02:54:36] 2025-07-26 06:54:05,556 | INFO     | all data control threads have been joined
[2025-07-26 02:54:36] 2025-07-26 06:54:06,017 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 02:54:36] 2025-07-26 06:54:06,403 | INFO     | [job] retrieve thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:06,425 | INFO     | [payload] control thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:06,426 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:06,438 | INFO     | [job] job monitor thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:06,562 | INFO     | [data] control thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:06,721 | INFO     | [payload] failed_post thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:07,060 | INFO     | all job control threads have been joined
[2025-07-26 02:54:36] 2025-07-26 06:54:07,090 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:07,103 | INFO     | [data] copytool_in thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:07,321 | INFO     | [payload] validate_post thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:07,403 | INFO     | [data] copytool_out thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:07,496 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:07,728 | INFO     | [job] validate thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:08,061 | INFO     | [job] control thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:08,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 02:54:36] 2025-07-26 06:54:09,269 | INFO     | [job] queue monitor thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:10,023 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:16,435 | INFO     | job.realtimelogging is not enabled
[2025-07-26 02:54:36] 2025-07-26 06:54:17,441 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 02:54:36] 2025-07-26 06:54:17,950 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117880784704)>', '<ExcThread(monitor, started 140116848793344)>']
[2025-07-26 02:54:36] 2025-07-26 06:54:22,957 | INFO     | all workflow threads have been joined
[2025-07-26 02:54:36] 2025-07-26 06:54:22,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 02:54:36] 2025-07-26 06:54:22,957 | INFO     | traces error code: 0
[2025-07-26 02:54:36] 2025-07-26 06:54:22,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 02:54:36] 2025-07-26 06:54:35,871 | INFO     | PID=5134 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-26 02:54:36] 2025-07-26 06:54:35,872 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 02:54:36] 2025-07-26 06:54:35,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 02:54:36] 2025-07-26 06:54:35,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 02:54:36] 2025-07-26 06:54:35,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 02:54:36] 2025-07-26 06:54:35,873 | CRITICAL | thread 'MainThread' is not alive
[2025-07-26 02:54:36] 2025-07-26 06:54:35,873 | INFO     | [monitor] control thread has ended
[2025-07-26 02:54:36] 2025-07-26 06:54:35,952 [wrapper] ==== pilot stdout END ====
[2025-07-26 02:54:36] 2025-07-26 06:54:35,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 02:54:36] 2025-07-26 06:54:35,960 [wrapper] pilotpid: 5134
[2025-07-26 02:54:36] 2025-07-26 06:54:35,964 [wrapper] Pilot exit status: 0
[2025-07-26 02:54:36] 2025-07-26 06:54:35,979 [wrapper] pandaids: 6745065791
[2025-07-26 02:54:36] 2025-07-26 06:54:36,019 [wrapper] cleanup supervisor_pilot 19264 5135
[2025-07-26 02:54:36] 2025-07-26 06:54:36,023 [wrapper] Test setup, not cleaning
[2025-07-26 02:54:36] 2025-07-26 06:54:36,027 [wrapper] apfmon messages muted
[2025-07-26 02:54:36] 2025-07-26 06:54:36,031 [wrapper] ==== wrapper stdout END ====
[2025-07-26 02:54:36] 2025-07-26 06:54:36,034 [wrapper] ==== wrapper stderr END ====
[2025-07-26 02:54:36]  *** Error codes and diagnostics ***
[2025-07-26 02:54:36]     "exeErrorCode": 0,
[2025-07-26 02:54:36]     "exeErrorDiag": "",
[2025-07-26 02:54:36]     "pilotErrorCode": 0,
[2025-07-26 02:54:36]     "pilotErrorDiag": "",
[2025-07-26 02:54:36]  *** Listing of results directory ***
[2025-07-26 02:54:36] total 353780
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas    530466 Jul 25 18:55 pilot3.tar.gz
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas      5112 Jul 25 19:24 queuedata.json
[2025-07-26 02:54:36] -rwx------ 1 boincer umatlas     36292 Jul 25 19:25 runpilot2-wrapper.sh
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas       100 Jul 26 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 02:54:36] -rwxr-xr-x 1 boincer umatlas      7986 Jul 26 01:31 run_atlas
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas       105 Jul 26 01:31 job.xml
[2025-07-26 02:54:36] -rw-r--r-- 2 boincer umatlas 144238848 Jul 26 01:31 EVNT.45743347._001607.pool.root.1
[2025-07-26 02:54:36] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 01:31 start_atlas.sh
[2025-07-26 02:54:36] drwxrwx--x 2 boincer umatlas      4096 Jul 26 01:31 shared
[2025-07-26 02:54:36] -rw-r--r-- 2 boincer umatlas    542897 Jul 26 01:31 input.tar.gz
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas         0 Jul 26 01:31 boinc_lockfile
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas      2563 Jul 26 01:31 pandaJob.out
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas    980001 Jul 26 01:32 agis_schedconf.cvmfs.json
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas   1593052 Jul 26 01:32 agis_ddmendpoints.agis.ALL.json
[2025-07-26 02:54:36] drwx------ 4 boincer umatlas      4096 Jul 26 01:32 pilot3
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas      5868 Jul 26 02:47 init_data.xml
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas       529 Jul 26 02:53 boinc_task_state.xml
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas 212493088 Jul 26 02:53 HITS.45743349._028731.pool.root.1
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas      1048 Jul 26 02:53 memory_monitor_summary.json
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas    362532 Jul 26 02:53 log.45743349._028731.job.log.tgz.1
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas      7853 Jul 26 02:54 heartbeat.json
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas      8192 Jul 26 02:54 boinc_mmap_file
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas        27 Jul 26 02:54 wrapper_checkpoint.txt
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas        95 Jul 26 02:54 pilot_heartbeat.json
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas       814 Jul 26 02:54 pilotlog.txt
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas    467829 Jul 26 02:54 log.45743349._028731.job.log.1
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas       357 Jul 26 02:54 output.list
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas       620 Jul 26 02:54 runtime_log
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas    849920 Jul 26 02:54 result.tar.gz
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas      8662 Jul 26 02:54 runtime_log.err
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas       659 Jul 26 02:54 OJCNDmMygz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyhQLDmVNFQSo.diag
[2025-07-26 02:54:36] -rw-r--r-- 1 boincer umatlas     21905 Jul 26 02:54 stderr.txt
[2025-07-26 02:54:36] HITS file was successfully produced:
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas 212493088 Jul 26 02:53 shared/HITS.pool.root.1
[2025-07-26 02:54:36]  *** Contents of shared directory: ***
[2025-07-26 02:54:36] total 349760
[2025-07-26 02:54:36] -rw-r--r-- 2 boincer umatlas 144238848 Jul 26 01:31 ATLAS.root_0
[2025-07-26 02:54:36] -rw-r--r-- 2 boincer umatlas     15095 Jul 26 01:31 start_atlas.sh
[2025-07-26 02:54:36] -rw-r--r-- 2 boincer umatlas    542897 Jul 26 01:31 input.tar.gz
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas 212493088 Jul 26 02:53 HITS.pool.root.1
[2025-07-26 02:54:36] -rw------- 1 boincer umatlas    849920 Jul 26 02:54 result.tar.gz
02:54:38 (1306): run_atlas exited; CPU time 53416.114936
02:54:38 (1306): called boinc_finish(0)

</stderr_txt>
]]>

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